RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	PEX15	Q08215	383 aa		4.64	□□□□□ -1.67
USV1	YPL230W	MAL31	P38156	614 aa		4.63	□□□□□ -1.67
USV1	YPL230W	SSZ1	P38788	538 aa	Known RBP	4.63	□□□□□ -1.67
USV1	YPL230W	YHR078W	P38799	552 aa		4.63	□□□□□ -1.67
USV1	YPL230W	RRP8	P38961	392 aa	Known RBP	4.63	□□□□□ -1.67
USV1	YPL230W	EMP65	P40085	556 aa		4.63	□□□□□ -1.67
USV1	YPL230W	YJR039W	P47107	1121 aa		4.63	□□□□□ -1.67
USV1	YPL230W	RNR4	P49723	345 aa	Known RBP	4.63	□□□□□ -1.67
USV1	YPL230W	AMA1	P50082	593 aa		4.63	□□□□□ -1.67
USV1	YPL230W	YGR021W	P53212	290 aa		4.63	□□□□□ -1.67
USV1	YPL230W	BRE5	P53741	515 aa	Known RBP	4.63	□□□□□ -1.67
USV1	YPL230W	LEE1	Q02799	301 aa	Known RBP	4.63	□□□□□ -1.67
USV1	YPL230W	ASM4	Q05166	528 aa		4.63	□□□□□ -1.67
USV1	YPL230W	SWI6	P09959	803 aa		4.62	□□□□□ -1.67
USV1	YPL230W	ATP12	P22135	325 aa		4.62	□□□□□ -1.67
USV1	YPL230W	YKU70	P32807	602 aa		4.62	□□□□□ -1.67
USV1	YPL230W	YKL133C	P36066	463 aa		4.62	□□□□□ -1.67
USV1	YPL230W	YIL166C	P40445	542 aa		4.62	□□□□□ -1.67
USV1	YPL230W	BFA1	P47113	574 aa		4.62	□□□□□ -1.67
USV1	YPL230W	YDL121C	Q07541	149 aa		4.62	□□□□□ -1.67
USV1	YPL230W	RRP6	Q12149	733 aa	Known RBP	4.62	□□□□□ -1.67
USV1	YPL230W	ICT1	Q12385	394 aa		4.62	□□□□□ -1.67
USV1	YPL230W	APA1	P16550	321 aa	Known RBP	4.61	□□□□□ -1.67
USV1	YPL230W	RIM4	P38741	713 aa		4.61	□□□□□ -1.67
USV1	YPL230W	MIP6	P38760	659 aa	Known RBP	4.61	□□□□□ -1.67
USV1	YPL230W	SAK1	P38990	1142 aa		4.61	□□□□□ -1.67
USV1	YPL230W	VHR1	P40522	640 aa		4.61	□□□□□ -1.67
USV1	YPL230W	HIS6	P40545	261 aa		4.61	□□□□□ -1.67
USV1	YPL230W	MRPS35	P53292	345 aa		4.61	□□□□□ -1.67
USV1	YPL230W	PKH1	Q03407	766 aa		4.61	□□□□□ -1.67
USV1	YPL230W	GPR1	Q12361	961 aa		4.61	□□□□□ -1.67
USV1	YPL230W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
USV1	YPL230W	GLN4	P13188	809 aa	Known RBP	4.6	□□□□□ -1.67
USV1	YPL230W	NGG1	P32494	702 aa		4.6	□□□□□ -1.67
USV1	YPL230W	YKR075C	P36155	307 aa		4.6	□□□□□ -1.67
USV1	YPL230W	YHL041W	P38730	149 aa		4.6	□□□□□ -1.67
USV1	YPL230W	BEM4	P39011	633 aa		4.6	□□□□□ -1.67
USV1	YPL230W	VID28	P40547	921 aa		4.6	□□□□□ -1.67
USV1	YPL230W	MTR3	P48240	250 aa	Predicted RBP	4.6	□□□□□ -1.67
USV1	YPL230W	DPB3	P27344	201 aa		4.59	□□□□□ -1.67
USV1	YPL230W	AKL1	P38080	1108 aa	Known RBP	4.59	□□□□□ -1.67
USV1	YPL230W	YBR053C	P38235	358 aa		4.59	□□□□□ -1.67
USV1	YPL230W	YHR202W	P38887	602 aa		4.59	□□□□□ -1.67
USV1	YPL230W	PFA3	P42836	336 aa		4.59	□□□□□ -1.67
USV1	YPL230W	TAN1	P53072	289 aa	Predicted RBP	4.59	□□□□□ -1.67
USV1	YPL230W	NOP15	P53927	220 aa	Predicted RBP	4.59	□□□□□ -1.67
USV1	YPL230W	GPD1	Q00055	391 aa	Known RBP	4.59	□□□□□ -1.67
USV1	YPL230W	SVL3	Q03088	825 aa	Known RBP	4.59	□□□□□ -1.67
USV1	YPL230W	YLR407W	Q06070	228 aa		4.59	□□□□□ -1.67
USV1	YPL230W	CDC26	P14724	124 aa		4.58	□□□□□ -1.68
USV1	YPL230W	DMC1	P25453	334 aa		4.58	□□□□□ -1.68
USV1	YPL230W	IMG2	P25642	146 aa	Predicted RBP	4.58	□□□□□ -1.68
USV1	YPL230W	MRS6	P32864	603 aa	Known RBP	4.58	□□□□□ -1.68
USV1	YPL230W	FLO10	P36170	1169 aa		4.58	□□□□□ -1.68
USV1	YPL230W	CBR1	P38626	284 aa	Known RBP	4.58	□□□□□ -1.68
USV1	YPL230W	CNM67	P53865	581 aa	Known RBP	4.58	□□□□□ -1.68
USV1	YPL230W	ORC4	P54791	529 aa		4.58	□□□□□ -1.68
USV1	YPL230W	CEG1	Q01159	459 aa	Predicted RBP	4.58	□□□□□ -1.68
USV1	YPL230W	MUS81	Q04149	632 aa	Predicted RBP	4.58	□□□□□ -1.68
USV1	YPL230W	THI7	Q05998	598 aa		4.58	□□□□□ -1.68
USV1	YPL230W	ARO10	Q06408	635 aa		4.58	□□□□□ -1.68
USV1	YPL230W	MSS18	P08593	268 aa		4.57	□□□□□ -1.68
USV1	YPL230W	PRP4	P20053	465 aa	Known RBP	4.57	□□□□□ -1.68
USV1	YPL230W	HXT4	P32467	576 aa		4.57	□□□□□ -1.68
USV1	YPL230W	APN2	P38207	520 aa		4.57	□□□□□ -1.68
USV1	YPL230W	PZF1	P39933	429 aa		4.57	□□□□□ -1.68
USV1	YPL230W	EAF5	P39995	279 aa		4.57	□□□□□ -1.68
USV1	YPL230W	QRI7	P43122	407 aa		4.57	□□□□□ -1.68
USV1	YPL230W	SET2	P46995	733 aa	Known RBP	4.57	□□□□□ -1.68
USV1	YPL230W	ASI2	P53895	289 aa		4.57	□□□□□ -1.68
USV1	YPL230W	SEC5	P89102	971 aa		4.57	□□□□□ -1.68
USV1	YPL230W	SSL2	Q00578	843 aa		4.57	□□□□□ -1.68
USV1	YPL230W	YMR210W	Q03649	449 aa		4.57	□□□□□ -1.68
USV1	YPL230W	CWC2	Q12046	339 aa	Predicted RBP	4.57	□□□□□ -1.68
USV1	YPL230W	YOL114C	Q12322	202 aa		4.57	□□□□□ -1.68
USV1	YPL230W	NKP1	Q12493	238 aa		4.57	□□□□□ -1.68
USV1	YPL230W	RPS17A	P02407	136 aa	Known RBP	4.56	□□□□□ -1.68
USV1	YPL230W	RPS17B	P14127	136 aa	Known RBP	4.56	□□□□□ -1.68
USV1	YPL230W	ADY2	P25613	283 aa		4.56	□□□□□ -1.68
USV1	YPL230W	DBF20	P32328	564 aa		4.56	□□□□□ -1.68
USV1	YPL230W	PTH2	P34222	208 aa		4.56	□□□□□ -1.68
USV1	YPL230W	EXO84	P38261	753 aa		4.56	□□□□□ -1.68
USV1	YPL230W	YIL092W	P40497	633 aa		4.56	□□□□□ -1.68
USV1	YPL230W	YIR042C	P40586	236 aa		4.56	□□□□□ -1.68
USV1	YPL230W	YRB30	P53107	440 aa	Predicted RBP	4.56	□□□□□ -1.68
USV1	YPL230W	HOL1	P53389	586 aa		4.56	□□□□□ -1.68
USV1	YPL230W	YPS7	Q06325	596 aa		4.56	□□□□□ -1.68
USV1	YPL230W	NGL1	Q08213	363 aa	Known RBP	4.56	□□□□□ -1.68
USV1	YPL230W	SGO1	Q08490	590 aa		4.56	□□□□□ -1.68
USV1	YPL230W	IRC13	Q08630	104 aa		4.56	□□□□□ -1.68
USV1	YPL230W	NUR1	Q12066	484 aa		4.56	□□□□□ -1.68
USV1	YPL230W	SPO11	P23179	398 aa		4.55	□□□□□ -1.68
USV1	YPL230W	TMT1	P32643	299 aa		4.55	□□□□□ -1.68
USV1	YPL230W	HIS7	P33734	552 aa	Known RBP	4.55	□□□□□ -1.68
USV1	YPL230W	IES1	P43579	692 aa		4.55	□□□□□ -1.68
USV1	YPL230W	PRP31	P49704	494 aa	Predicted RBP	4.55	□□□□□ -1.68
USV1	YPL230W	GLO1	P50107	326 aa		4.55	□□□□□ -1.68
USV1	YPL230W	BRE1	Q07457	700 aa	Known RBP	4.55	□□□□□ -1.68
USV1	YPL230W	PHO81	P17442	1178 aa		4.54	□□□□□ -1.68
USV1	YPL230W	HOP1	P20050	605 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms