RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeastyeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE4YNR060W SDH1Q00711 640 aa3.83□□□□□ -1.8
FRE4YNR060W YMR187CQ03236 431 aa3.83□□□□□ -1.8
FRE4YNR060W TPP1Q03796 238 aa3.83□□□□□ -1.8
FRE4YNR060W GSF2Q04697 403 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W YPS7Q06325 596 aa3.83□□□□□ -1.8
FRE4YNR060W YPR196WQ06595 470 aa3.83□□□□□ -1.8
FRE4YNR060W PSR1Q07800 427 aa3.83□□□□□ -1.8
FRE4YNR060W PSK2Q08217 1101 aa3.83□□□□□ -1.8
FRE4YNR060W PUS1Q12211 544 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W SEM1O94742 89 aa3.83□□□□□ -1.8
FRE4YNR060W YEL076C-AP0CX16 216 aa3.83□□□□□ -1.8
FRE4YNR060W YLR464WP0CX17 216 aa3.83□□□□□ -1.8
FRE4YNR060W ACO1P19414 778 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
FRE4YNR060W RFA1P22336 621 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W IME2P32581 645 aa3.83□□□□□ -1.8
FRE4YNR060W MUM2P38236 366 aa3.83□□□□□ -1.8
FRE4YNR060W YBR138CP38277 524 aa3.83□□□□□ -1.8
FRE4YNR060W MIP6P38760 659 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W PEX7P39108 375 aa3.83□□□□□ -1.8
FRE4YNR060W YEL076CP39971 216 aa3.83□□□□□ -1.8
FRE4YNR060W YFL052WP43551 465 aa3.83□□□□□ -1.8
FRE4YNR060W CTF18P49956 741 aa3.83□□□□□ -1.8
FRE4YNR060W RBG2P53295 368 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W ARE2P53629 642 aaKnown RBP3.83□□□□□ -1.8
FRE4YNR060W YLR352WQ06479 807 aa3.83□□□□□ -1.8
FRE4YNR060W ENT1Q12518 454 aa3.83□□□□□ -1.8
FRE4YNR060W YPR053CQ6Q5F3 151 aa3.83□□□□□ -1.8
FRE4YNR060W MON2P48563 1636 aaPredicted RBP3.82□□□□□ -1.8
FRE4YNR060W VAS1P07806 1104 aaKnown RBP3.82□□□□□ -1.8
FRE4YNR060W CDC16P09798 840 aa3.82□□□□□ -1.8
FRE4YNR060W IME1P21190 360 aa3.82□□□□□ -1.8
FRE4YNR060W CMK1P27466 446 aaKnown RBP3.82□□□□□ -1.8
FRE4YNR060W RAD16P31244 790 aa3.82□□□□□ -1.8
FRE4YNR060W VMA8P32610 256 aaKnown RBP3.82□□□□□ -1.8
FRE4YNR060W NPL6P32832 435 aa3.82□□□□□ -1.8
FRE4YNR060W TYE7P33122 291 aaPredicted RBP3.82□□□□□ -1.8
FRE4YNR060W YKL050CP35736 922 aa3.82□□□□□ -1.8
FRE4YNR060W SDS22P36047 338 aa3.82□□□□□ -1.8
FRE4YNR060W SET3P36124 751 aa3.82□□□□□ -1.8
FRE4YNR060W UBS1P38290 277 aa3.82□□□□□ -1.8
FRE4YNR060W SIC1P38634 284 aa3.82□□□□□ -1.8
FRE4YNR060W AKR1P39010 764 aa3.82□□□□□ -1.8
FRE4YNR060W YEL068CP39977 110 aa3.82□□□□□ -1.8
FRE4YNR060W CCT8P47079 568 aaKnown RBP3.82□□□□□ -1.8
FRE4YNR060W MNT2P53059 558 aa3.82□□□□□ -1.8
FRE4YNR060W SSL1Q04673 461 aaPredicted RBP3.82□□□□□ -1.8
FRE4YNR060W MCH5Q08777 521 aa3.82□□□□□ -1.8
FRE4YNR060W PRC1P00729 532 aa3.82□□□□□ -1.8
FRE4YNR060W LEU2P04173 364 aaPredicted RBP3.82□□□□□ -1.8
FRE4YNR060W SLC1P33333 303 aa3.82□□□□□ -1.8
FRE4YNR060W WHI3P34761 661 aaKnown RBP3.82□□□□□ -1.8
FRE4YNR060W SAF1P38352 637 aa3.82□□□□□ -1.8
FRE4YNR060W YNR071CP53757 342 aa3.82□□□□□ -1.8
FRE4YNR060W IRC3Q06683 689 aa3.82□□□□□ -1.8
FRE4YNR060W STP4Q07351 490 aa3.82□□□□□ -1.8
FRE4YNR060W SKI3P17883 1432 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W RPS17AP02407 136 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W SUP35P05453 685 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W NUC1P08466 329 aa3.81□□□□□ -1.8
FRE4YNR060W RPS17BP14127 136 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W CBP3P21560 335 aa3.81□□□□□ -1.8
FRE4YNR060W SIR1P21691 654 aa3.81□□□□□ -1.8
FRE4YNR060W FRD1P32614 470 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W SAP190P36123 1033 aa3.81□□□□□ -1.8
FRE4YNR060W ABZ1P37254 787 aaPredicted RBP3.81□□□□□ -1.8
FRE4YNR060W GPD2P41911 440 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W SSL2Q00578 843 aa3.81□□□□□ -1.8
FRE4YNR060W RCR2Q03446 210 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W YLR287CQ05881 355 aa3.81□□□□□ -1.8
FRE4YNR060W YLR122CQ12312 125 aa3.81□□□□□ -1.8
FRE4YNR060W RIB2Q12362 591 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W DBP10Q12389 995 aaKnown RBP3.81□□□□□ -1.8
FRE4YNR060W TPM1P17536 199 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W IMG2P25642 146 aaPredicted RBP3.8□□□□□ -1.8
FRE4YNR060W LSM5P40089 93 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W GID8P40208 455 aa3.8□□□□□ -1.8
FRE4YNR060W MMM1P41800 426 aa3.8□□□□□ -1.8
FRE4YNR060W RAI1P53063 387 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W DUS1P53759 423 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W MRPL19P53875 158 aa3.8□□□□□ -1.8
FRE4YNR060W CBK1P53894 756 aa3.8□□□□□ -1.8
FRE4YNR060W YPL034WQ03083 165 aa3.8□□□□□ -1.8
FRE4YNR060W UTP21Q06078 939 aaPredicted RBP3.8□□□□□ -1.8
FRE4YNR060W YPL277CQ08989 487 aa3.8□□□□□ -1.8
FRE4YNR060W OSW2Q12202 724 aa3.8□□□□□ -1.8
FRE4YNR060W HSH49Q99181 213 aaPredicted RBP3.8□□□□□ -1.8
FRE4YNR060W PHO5P00635 467 aa3.8□□□□□ -1.8
FRE4YNR060W FUM1P08417 488 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W SPS1P08458 490 aa3.8□□□□□ -1.8
FRE4YNR060W YPT7P32939 208 aa3.8□□□□□ -1.8
FRE4YNR060W ESL2P36168 1195 aa3.8□□□□□ -1.8
FRE4YNR060W POA1P38218 177 aa3.8□□□□□ -1.8
FRE4YNR060W YBR225WP38321 900 aa3.8□□□□□ -1.8
FRE4YNR060W SSP120P39931 234 aaKnown RBP3.8□□□□□ -1.8
FRE4YNR060W ASM4Q05166 528 aa3.8□□□□□ -1.8
FRE4YNR060W IWR1Q07532 353 aaPredicted RBP3.8□□□□□ -1.8
FRE4YNR060W TAH18Q12181 623 aa3.8□□□□□ -1.8
FRE4YNR060W SVS1Q12254 260 aa3.8□□□□□ -1.8
FRE4YNR060W RPS9AO13516 197 aaKnown RBP3.79□□□□□ -1.8
FRE4YNR060W COQ4O13525 335 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms