RNA–Protein interactions for RNA: YNL287W

SEC21, Transcript of Gamma subunit of coatomer, yeastyeast

Gene SEC21, Length 2,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC21YNL287W BAP3P41815 604 aa1.52□□□□□ -2.17
SEC21YNL287W BUD27P43573 796 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
SEC21YNL287W HOP2P53187 214 aa1.52□□□□□ -2.17
SEC21YNL287W YNL247WP53852 767 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W ALF1P53904 254 aa1.52□□□□□ -2.17
SEC21YNL287W LCD1Q04377 747 aa1.52□□□□□ -2.17
SEC21YNL287W SWA2Q06677 668 aa1.52□□□□□ -2.17
SEC21YNL287W GLE1Q12315 538 aa1.52□□□□□ -2.17
SEC21YNL287W APC2Q12440 853 aa1.52□□□□□ -2.17
SEC21YNL287W YOR093CQ12275 1648 aa1.52□□□□□ -2.17
SEC21YNL287W SIR3P06701 978 aa1.52□□□□□ -2.17
SEC21YNL287W LAT1P12695 482 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W PGI1P12709 554 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W KAR3P17119 729 aa1.52□□□□□ -2.17
SEC21YNL287W PGS1P25578 521 aa1.52□□□□□ -2.17
SEC21YNL287W SWC3P31376 625 aa1.52□□□□□ -2.17
SEC21YNL287W TIM23P32897 222 aa1.52□□□□□ -2.17
SEC21YNL287W YKL100CP34248 587 aa1.52□□□□□ -2.17
SEC21YNL287W TAF5P38129 798 aa1.52□□□□□ -2.17
SEC21YNL287W OTU2P38747 307 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W YMR124WP39523 943 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W SWD1P39706 426 aa1.52□□□□□ -2.17
SEC21YNL287W SPF1P39986 1215 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W FMP10P40098 244 aa1.52□□□□□ -2.17
SEC21YNL287W VHR1P40522 640 aa1.52□□□□□ -2.17
SEC21YNL287W SAP185P40856 1058 aa1.52□□□□□ -2.17
SEC21YNL287W GPP1P41277 250 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W FKH2P41813 862 aa1.52□□□□□ -2.17
SEC21YNL287W YJR120WP47157 116 aa1.52□□□□□ -2.17
SEC21YNL287W UBX4P54730 416 aa1.52□□□□□ -2.17
SEC21YNL287W SMX3P54999 86 aaPredicted RBP1.52□□□□□ -2.17
SEC21YNL287W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
SEC21YNL287W SND1Q04007 877 aa1.52□□□□□ -2.17
SEC21YNL287W MUS81Q04149 632 aaPredicted RBP1.52□□□□□ -2.17
SEC21YNL287W TAP42Q04372 366 aa1.52□□□□□ -2.17
SEC21YNL287W CSR1Q06705 408 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W SGO1Q08490 590 aa1.52□□□□□ -2.17
SEC21YNL287W ENV7Q12003 364 aa1.52□□□□□ -2.17
SEC21YNL287W NFI1Q12216 726 aa1.52□□□□□ -2.17
SEC21YNL287W TMA7Q3E764 64 aaKnown RBP1.52□□□□□ -2.17
SEC21YNL287W SSH4P32343 579 aa1.51□□□□□ -2.17
SEC21YNL287W IMP2'P32351 346 aa1.51□□□□□ -2.17
SEC21YNL287W SMY1P32364 656 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W NUP120P35729 1037 aa1.51□□□□□ -2.17
SEC21YNL287W YKL050CP35736 922 aa1.51□□□□□ -2.17
SEC21YNL287W KDX1P36005 433 aa1.51□□□□□ -2.17
SEC21YNL287W YBL028CP38202 106 aa1.51□□□□□ -2.17
SEC21YNL287W HSM3P38348 480 aa1.51□□□□□ -2.17
SEC21YNL287W FMP52P40008 231 aa1.51□□□□□ -2.17
SEC21YNL287W CCT7P42943 550 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W VTC2P43585 828 aa1.51□□□□□ -2.17
SEC21YNL287W SAE2P46946 345 aa1.51□□□□□ -2.17
SEC21YNL287W ATP22P50273 684 aaPredicted RBP1.51□□□□□ -2.17
SEC21YNL287W TAN1P53072 289 aaPredicted RBP1.51□□□□□ -2.17
SEC21YNL287W SHE10P53075 577 aa1.51□□□□□ -2.17
SEC21YNL287W HUL5P53119 910 aa1.51□□□□□ -2.17
SEC21YNL287W SPC105P53148 917 aa1.51□□□□□ -2.17
SEC21YNL287W ERO1Q03103 563 aa1.51□□□□□ -2.17
SEC21YNL287W HOT1Q03213 719 aa1.51□□□□□ -2.17
SEC21YNL287W HOF1Q05080 669 aa1.51□□□□□ -2.17
SEC21YNL287W MRD1Q06106 887 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W IRC13Q08630 104 aa1.51□□□□□ -2.17
SEC21YNL287W THI21Q08975 551 aa1.51□□□□□ -2.17
SEC21YNL287W ICT1Q12385 394 aa1.51□□□□□ -2.17
SEC21YNL287W TMA17Q12513 150 aa1.51□□□□□ -2.17
SEC21YNL287W YEF3P16521 1044 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W MER1P16523 270 aa1.51□□□□□ -2.17
SEC21YNL287W REC107P21651 314 aa1.51□□□□□ -2.17
SEC21YNL287W RME1P32338 300 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W DPH2P32461 534 aa1.51□□□□□ -2.17
SEC21YNL287W EUG1P32474 517 aa1.51□□□□□ -2.17
SEC21YNL287W VMA8P32610 256 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W TFB1P32776 642 aa1.51□□□□□ -2.17
SEC21YNL287W BUD2P33314 1104 aa1.51□□□□□ -2.17
SEC21YNL287W REC104P33323 182 aa1.51□□□□□ -2.17
SEC21YNL287W YRO2P38079 344 aa1.51□□□□□ -2.17
SEC21YNL287W YHR020WP38708 688 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W YIL166CP40445 542 aa1.51□□□□□ -2.17
SEC21YNL287W YIR042CP40586 236 aa1.51□□□□□ -2.17
SEC21YNL287W LAM5P43560 674 aa1.51□□□□□ -2.17
SEC21YNL287W DUS1P53759 423 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W VPS30Q02948 557 aa1.51□□□□□ -2.17
SEC21YNL287W SNZ1Q03148 297 aa1.51□□□□□ -2.17
SEC21YNL287W NSE5Q03718 556 aa1.51□□□□□ -2.17
SEC21YNL287W ASM4Q05166 528 aa1.51□□□□□ -2.17
SEC21YNL287W SPN1Q06505 410 aaPredicted RBP1.51□□□□□ -2.17
SEC21YNL287W REH1Q06709 432 aa1.51□□□□□ -2.17
SEC21YNL287W SDH5Q08230 162 aa1.51□□□□□ -2.17
SEC21YNL287W WRS1Q12109 432 aaKnown RBP1.51□□□□□ -2.17
SEC21YNL287W HAL9Q12180 1030 aa1.51□□□□□ -2.17
SEC21YNL287W MED1Q12321 566 aa1.51□□□□□ -2.17
SEC21YNL287W OSH2Q12451 1283 aa1.51□□□□□ -2.17
SEC21YNL287W ATG11Q12527 1178 aa1.51□□□□□ -2.17
SEC21YNL287W YIL002W-AQ3E7Z5 69 aa1.51□□□□□ -2.17
SEC21YNL287W ESC1Q03661 1658 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W YLR415CO13578 112 aa1.5□□□□□ -2.17
SEC21YNL287W GAL1P04385 528 aa1.5□□□□□ -2.17
SEC21YNL287W PHO8P11491 566 aa1.5□□□□□ -2.17
SEC21YNL287W RPL8AP17076 256 aaKnown RBP1.5□□□□□ -2.17
SEC21YNL287W GLK1P17709 500 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 139.7 ms