RNA–Protein interactions for RNA: YMR218C

TRS130, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS130, Length 3,309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS130	YMR218C	CRF1	Q04930	467 aa		2.61	□□□□□ -1.99
TRS130	YMR218C	DUS3	Q06053	668 aa	Known RBP	2.61	□□□□□ -1.99
TRS130	YMR218C	SGD1	Q06132	899 aa		2.61	□□□□□ -1.99
TRS130	YMR218C	RSC58	Q07979	502 aa		2.61	□□□□□ -1.99
TRS130	YMR218C	CDC45	Q08032	650 aa		2.61	□□□□□ -1.99
TRS130	YMR218C	NUR1	Q12066	484 aa		2.61	□□□□□ -1.99
TRS130	YMR218C	HEM13	P11353	328 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	KRR1	P25586	316 aa	Predicted RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	PAT1	P25644	796 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	RPC82	P32349	654 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	SCT1	P32784	759 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	SEG2	P34250	1132 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	BMH2	P34730	273 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	DPH1	P40487	425 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	LYS14	P40971	790 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	SMK1	P41808	388 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	DUG1	P43616	481 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	NET1	P47035	1189 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	LIA1	P47120	325 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	RTC4	P53850	401 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	SDH5	Q08230	162 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	YOL107W	Q12239	342 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	GIS3	Q12418	502 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	RPS21A	P0C0V8	87 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	GUK1	P15454	187 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	STE11	P23561	717 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	DBP2	P24783	546 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	PYC2	P32327	1180 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	POA1	P38218	177 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	CCZ1	P38273	704 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	HSL7	P38274	827 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	YAP3	P38749	330 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	HXT13	P39924	564 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	RNR4	P49723	345 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	HXT17	P53631	564 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	TEP1	P53916	434 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	HXT15	P54854	567 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	HOS3	Q02959	697 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	FRK1	Q03002	865 aa	Predicted RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	ARX1	Q03862	593 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	ARA2	Q04212	335 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	RAD33	Q04231	177 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	PGC1	Q08959	321 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	RUD3	Q12234	484 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	FUM1	P08417	488 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	RED1	P14291	827 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	SEC23	P15303	768 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	MET8	P15807	274 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	CWH43	P25618	953 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	ICL1	P28240	557 aa	Predicted RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
TRS130	YMR218C	PET10	P36139	283 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	YHR218W	P38899	603 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	YMR124W	P39523	943 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	RRD1	P40454	393 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	GZF3	P42944	551 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
TRS130	YMR218C	YPL062W	Q02781	134 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	MFB1	Q04922	465 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	EST2	Q06163	884 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	ATG33	Q06485	197 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	OPY2	Q06810	360 aa		2.6	□□□□□ -1.99
TRS130	YMR218C	CFT1	Q06632	1357 aa	Known RBP	2.6	□□□□□ -1.99
TRS130	YMR218C	ADE8	P04161	214 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	MET17	P06106	444 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	NUC1	P08466	329 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	GFA1	P14742	717 aa	Known RBP	2.59	□□□□□ -1.99
TRS130	YMR218C	PRD1	P25375	712 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	PCL7	P40186	285 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	MDE1	P47095	244 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	ALT1	P52893	592 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	YGR054W	P53235	642 aa	Known RBP	2.59	□□□□□ -1.99
TRS130	YMR218C	YAP1802	P53309	568 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	CBK1	P53894	756 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	YPL071C	Q02864	156 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	AIM32	Q04689	311 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	SMF3	Q12078	473 aa	Predicted RBP	2.59	□□□□□ -1.99
TRS130	YMR218C	LYS2	P07702	1392 aa		2.59	□□□□□ -1.99
TRS130	YMR218C	NUP159	P40477	1460 aa		2.59	□□□□□ -2
TRS130	YMR218C	GPA1	P08539	472 aa		2.59	□□□□□ -2
TRS130	YMR218C	RGP1	P16664	663 aa		2.59	□□□□□ -2
TRS130	YMR218C	LCB1	P25045	558 aa	Known RBP	2.59	□□□□□ -2
TRS130	YMR218C	SYP1	P25623	870 aa	Known RBP	2.59	□□□□□ -2
TRS130	YMR218C	REI1	P38344	393 aa	Predicted RBP	2.59	□□□□□ -2
TRS130	YMR218C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
TRS130	YMR218C	TPA1	P40032	644 aa	Known RBP	2.59	□□□□□ -2
TRS130	YMR218C	JEM1	P40358	645 aa		2.59	□□□□□ -2
TRS130	YMR218C	AGX1	P43567	385 aa		2.59	□□□□□ -2
TRS130	YMR218C	RET2	P43621	546 aa		2.59	□□□□□ -2
TRS130	YMR218C	NUP85	P46673	744 aa		2.59	□□□□□ -2
TRS130	YMR218C	YJL181W	P46987	611 aa		2.59	□□□□□ -2
TRS130	YMR218C	MDR1	P53258	950 aa		2.59	□□□□□ -2
TRS130	YMR218C	PAP2	P53632	584 aa	Known RBP	2.59	□□□□□ -2
TRS130	YMR218C	NOP15	P53927	220 aa	Predicted RBP	2.59	□□□□□ -2
TRS130	YMR218C	CEG1	Q01159	459 aa	Predicted RBP	2.59	□□□□□ -2
TRS130	YMR218C	TIM50	Q02776	476 aa		2.59	□□□□□ -2
TRS130	YMR218C	EMG1	Q06287	252 aa	Known RBP	2.59	□□□□□ -2
TRS130	YMR218C	RSC3	Q06639	885 aa		2.59	□□□□□ -2
TRS130	YMR218C	HAL9	Q12180	1030 aa		2.59	□□□□□ -2
TRS130	YMR218C	YIL177C	P40434	1758 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 173.6 ms