RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR046C	YMR046C	VBA4	Q04602	768 aa	Known RBP	4.1	□□□□□ -1.75
YMR046C	YMR046C	THI22	Q06490	572 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	STP4	Q07351	490 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	POM34	Q12445	299 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	YKL033W-A	Q86ZR7	236 aa		4.1	□□□□□ -1.75
YMR046C	YMR046C	HCA4	P20448	770 aa	Known RBP	4.09	□□□□□ -1.75
YMR046C	YMR046C	ATP12	P22135	325 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	PLC1	P32383	869 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	YPT7	P32939	208 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	CHS7	P38843	316 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YMR046C	YMR046C	BUD8	P41698	603 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	IES1	P43579	692 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	RNR4	P49723	345 aa	Known RBP	4.09	□□□□□ -1.75
YMR046C	YMR046C	ZRT2	Q12436	422 aa		4.09	□□□□□ -1.75
YMR046C	YMR046C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
YMR046C	YMR046C	RPS9B	P05755	195 aa	Known RBP	4.08	□□□□□ -1.76
YMR046C	YMR046C	SIR3	P06701	978 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	CDC26	P14724	124 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	COX11	P19516	300 aa	Known RBP	4.08	□□□□□ -1.76
YMR046C	YMR046C	SEC15	P22224	910 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	KIN82	P25341	720 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	HEM12	P32347	362 aa	Predicted RBP	4.08	□□□□□ -1.76
YMR046C	YMR046C	BCS1	P32839	456 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	PXA1	P41909	870 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	MUK1	Q02866	612 aa		4.08	□□□□□ -1.76
YMR046C	YMR046C	KAR1	P11927	433 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	PRP22	P24384	1145 aa	Known RBP	4.07	□□□□□ -1.76
YMR046C	YMR046C	FEN2	P25621	512 aa	Known RBP	4.07	□□□□□ -1.76
YMR046C	YMR046C	DGR2	P32330	852 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	PIG2	P40187	538 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	YIL077C	P40508	320 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	TAF4	P50105	388 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	TEL2	P53038	688 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	SLD3	P53135	668 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	RIA1	P53893	1110 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	OMS1	Q06668	471 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	ACF2	Q12168	779 aa		4.07	□□□□□ -1.76
YMR046C	YMR046C	SEC6	P32844	805 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	PHO11	P35842	467 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	GRX7	P38068	203 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	COS111	P38308	924 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	PHO12	P38693	467 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	YHL017W	P38745	532 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	PCL5	P38794	229 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	STB4	P50104	949 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	PEX8	P53248	589 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	FHN1	P53279	174 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	YAP1802	P53309	568 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	PPN1	Q04119	674 aa		4.06	□□□□□ -1.76
YMR046C	YMR046C	ECM38	Q05902	660 aa	Predicted RBP	4.06	□□□□□ -1.76
YMR046C	YMR046C	NGL1	Q08213	363 aa	Known RBP	4.06	□□□□□ -1.76
YMR046C	YMR046C	CLF1	Q12309	687 aa	Predicted RBP	4.06	□□□□□ -1.76
YMR046C	YMR046C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
YMR046C	YMR046C	PRP28	P23394	588 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	MF(ALPHA)2	P32435	120 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	HXT4	P32467	576 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	CBR1	P38626	284 aa	Known RBP	4.05	□□□□□ -1.76
YMR046C	YMR046C	YHR033W	P38690	423 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	EMP65	P40085	556 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	ENP2	P48234	707 aa	Known RBP	4.05	□□□□□ -1.76
YMR046C	YMR046C	RFX1	P48743	811 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	SSL2	Q00578	843 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	NSE5	Q03718	556 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	SND1	Q04007	877 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	PHM6	Q05637	104 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	YFT2	Q06676	274 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	MLH3	Q12083	715 aa		4.05	□□□□□ -1.76
YMR046C	YMR046C	CHS5	Q12114	671 aa	Known RBP	4.05	□□□□□ -1.76
YMR046C	YMR046C	PRE4	P30657	266 aa		4.04	□□□□□ -1.76
YMR046C	YMR046C	PEA2	P40091	420 aa		4.04	□□□□□ -1.76
YMR046C	YMR046C	SPO1	P53541	631 aa		4.04	□□□□□ -1.76
YMR046C	YMR046C	TIM44	Q01852	431 aa		4.04	□□□□□ -1.76
YMR046C	YMR046C	HBT1	Q07653	1046 aa	Known RBP	4.04	□□□□□ -1.76
YMR046C	YMR046C	PEX15	Q08215	383 aa		4.04	□□□□□ -1.76
YMR046C	YMR046C	THR1	P17423	357 aa	Known RBP	4.03	□□□□□ -1.76
YMR046C	YMR046C	OAR1	P35731	278 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	MOH1	P38191	138 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	SRP68	P38687	599 aa	Known RBP	4.03	□□□□□ -1.76
YMR046C	YMR046C	YNL034W	P53963	612 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	YNL018C	P53976	612 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	TGL2	P54857	326 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	MCH5	Q08777	521 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	CWC2	Q12046	339 aa	Predicted RBP	4.03	□□□□□ -1.76
YMR046C	YMR046C	USV1	Q12132	391 aa		4.03	□□□□□ -1.76
YMR046C	YMR046C	TMA7	Q3E764	64 aa	Known RBP	4.03	□□□□□ -1.76
YMR046C	YMR046C	YEL076C-A	P0CX16	216 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	YLR464W	P0CX17	216 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	YEL076C	P39971	216 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	PRM2	P40534	656 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	IRC5	P43610	853 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	MPS3	P47069	682 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	HOL1	P53389	586 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	SMX3	P54999	86 aa	Predicted RBP	4.02	□□□□□ -1.77
YMR046C	YMR046C	MPD2	Q99316	277 aa		4.02	□□□□□ -1.77
YMR046C	YMR046C	MSS1	P32559	526 aa	Predicted RBP	4.01	□□□□□ -1.77
YMR046C	YMR046C	MTC7	P32633	139 aa		4.01	□□□□□ -1.77
YMR046C	YMR046C	SET3	P36124	751 aa		4.01	□□□□□ -1.77
YMR046C	YMR046C	CDS1	P38221	457 aa		4.01	□□□□□ -1.77

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