RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C EMP47P43555 445 aa2.48□□□□□ -2.01
VPS13YLL040C FMP33P46998 180 aa2.48□□□□□ -2.01
VPS13YLL040C YGR067CP53243 804 aa2.48□□□□□ -2.01
VPS13YLL040C CWC2Q12046 339 aaPredicted RBP2.48□□□□□ -2.01
VPS13YLL040C BI2P03873 423 aa2.48□□□□□ -2.01
VPS13YLL040C BI4P03879 638 aa2.48□□□□□ -2.01
VPS13YLL040C DMC1P25453 334 aa2.48□□□□□ -2.01
VPS13YLL040C PAP1P29468 568 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C WHI3P34761 661 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C GRS1P38088 690 aaKnown RBP2.48□□□□□ -2.01
VPS13YLL040C RSM28Q03430 361 aa2.48□□□□□ -2.01
VPS13YLL040C BI3Q9ZZW7 517 aa2.48□□□□□ -2.01
VPS13YLL040C MYO1P08964 1928 aa2.47□□□□□ -2.01
VPS13YLL040C ATP6P00854 259 aa2.47□□□□□ -2.01
VPS13YLL040C HSP60P19882 572 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C CLB5P30283 435 aa2.47□□□□□ -2.01
VPS13YLL040C EFB1P32471 206 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C PEX5P35056 612 aa2.47□□□□□ -2.01
VPS13YLL040C HIS2P38635 335 aa2.47□□□□□ -2.01
VPS13YLL040C PFK26P40433 827 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C DPH1P40487 425 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C GVP36P40531 326 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C YJL045WP47052 634 aa2.47□□□□□ -2.01
VPS13YLL040C ASE1P50275 885 aa2.47□□□□□ -2.01
VPS13YLL040C ZPR1P53303 486 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C RMD1Q03441 430 aa2.47□□□□□ -2.01
VPS13YLL040C SPE3Q12074 293 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C MDM20Q12387 796 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C SIP3P38717 1229 aa2.47□□□□□ -2.01
VPS13YLL040C YIL055CP40523 627 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C KTR5P53966 522 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C KCS1Q12494 1050 aa2.47□□□□□ -2.01
VPS13YLL040C ARG1P22768 420 aa2.47□□□□□ -2.01
VPS13YLL040C SEC6P32844 805 aa2.47□□□□□ -2.01
VPS13YLL040C OCA5P38738 679 aa2.47□□□□□ -2.01
VPS13YLL040C NMD5P46970 1048 aa2.47□□□□□ -2.01
VPS13YLL040C MTR3P48240 250 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C UAF30Q08747 228 aa2.47□□□□□ -2.01
VPS13YLL040C PFK1P16861 987 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C DBF4P32325 704 aa2.47□□□□□ -2.01
VPS13YLL040C VMA6P32366 345 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C MET4P32389 672 aa2.47□□□□□ -2.01
VPS13YLL040C RCN1P36054 211 aa2.47□□□□□ -2.01
VPS13YLL040C SPC42P36094 363 aa2.47□□□□□ -2.01
VPS13YLL040C MSG5P38590 489 aa2.47□□□□□ -2.01
VPS13YLL040C KSP1P38691 1029 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C STB5P38699 743 aa2.47□□□□□ -2.01
VPS13YLL040C IST1P53843 298 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C TIM8P57744 87 aa2.47□□□□□ -2.01
VPS13YLL040C GIR2Q03768 265 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C TVP15Q03860 143 aa2.47□□□□□ -2.01
VPS13YLL040C YMR114CQ04471 368 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C IVY1Q04934 453 aa2.47□□□□□ -2.01
VPS13YLL040C TAF9Q05027 157 aa2.47□□□□□ -2.01
VPS13YLL040C ERG6P25087 383 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C CSG2P35206 410 aa2.47□□□□□ -2.01
VPS13YLL040C CDC27P38042 758 aa2.47□□□□□ -2.01
VPS13YLL040C MMM1P41800 426 aa2.47□□□□□ -2.01
VPS13YLL040C SBE2P42223 864 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C YJR054WP47114 497 aa2.47□□□□□ -2.01
VPS13YLL040C HSH49Q99181 213 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C TPS2P31688 896 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C NTA1P40354 457 aa2.47□□□□□ -2.01
VPS13YLL040C PAN2P53010 1115 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C TAD1P53065 400 aa2.47□□□□□ -2.01
VPS13YLL040C YNL115CP53925 644 aa2.47□□□□□ -2.01
VPS13YLL040C TMA20P89886 181 aaPredicted RBP2.47□□□□□ -2.01
VPS13YLL040C VPS5Q92331 675 aa2.47□□□□□ -2.01
VPS13YLL040C PET122P10355 254 aa2.47□□□□□ -2.01
VPS13YLL040C AMS1P22855 1083 aa2.47□□□□□ -2.01
VPS13YLL040C SLA2P33338 968 aa2.47□□□□□ -2.01
VPS13YLL040C ATG19P35193 415 aa2.47□□□□□ -2.01
VPS13YLL040C MRX3P38172 270 aa2.47□□□□□ -2.01
VPS13YLL040C GIP1P38229 639 aa2.47□□□□□ -2.01
VPS13YLL040C ARN1P38731 627 aa2.47□□□□□ -2.01
VPS13YLL040C FCY21P40039 528 aa2.47□□□□□ -2.01
VPS13YLL040C PSA1P41940 361 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C BRE2P43132 505 aa2.47□□□□□ -2.01
VPS13YLL040C TOS3P43637 560 aa2.47□□□□□ -2.01
VPS13YLL040C LIF1P53150 421 aa2.47□□□□□ -2.01
VPS13YLL040C LSC2P53312 427 aa2.47□□□□□ -2.01
VPS13YLL040C HDA1P53973 706 aa2.47□□□□□ -2.01
VPS13YLL040C GPD1Q00055 391 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C SWP1Q02795 286 aa2.47□□□□□ -2.01
VPS13YLL040C YML082WQ04533 649 aaKnown RBP2.47□□□□□ -2.01
VPS13YLL040C VHS3Q08438 674 aa2.47□□□□□ -2.01
VPS13YLL040C SCM3Q12334 223 aa2.47□□□□□ -2.01
VPS13YLL040C REP1P03871 373 aa2.46□□□□□ -2.01
VPS13YLL040C GFD2P25370 566 aaKnown RBP2.46□□□□□ -2.01
VPS13YLL040C EFT1P32324 842 aaKnown RBP2.46□□□□□ -2.01
VPS13YLL040C YHR054CP38780 354 aa2.46□□□□□ -2.01
VPS13YLL040C RSC30P38781 883 aa2.46□□□□□ -2.01
VPS13YLL040C YMR124WP39523 943 aaKnown RBP2.46□□□□□ -2.01
VPS13YLL040C YMR134WP40207 237 aa2.46□□□□□ -2.01
VPS13YLL040C NNF2P53253 936 aa2.46□□□□□ -2.01
VPS13YLL040C ATG38Q05789 226 aaKnown RBP2.46□□□□□ -2.01
VPS13YLL040C BUD23P25627 275 aaPredicted RBP2.46□□□□□ -2.02
VPS13YLL040C YKL100CP34248 587 aa2.46□□□□□ -2.02
VPS13YLL040C SWC5P38326 303 aa2.46□□□□□ -2.02
VPS13YLL040C SCS2P40075 244 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms