RNA–Protein interactions for RNA: YKR063C

LAS1, Transcript of Protein required for pre-rRNA processing at both ends of ITS2, yeast

Gene LAS1, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAS1	YKR063C	FLO11	P08640	1367 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
LAS1	YKR063C	THR4	P16120	514 aa	Known RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	SRP40	P32583	406 aa	Predicted RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	VPS45	P38932	577 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	CCT3	P39077	534 aa	Known RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	MDM1	Q01846	1127 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	VPS16	Q03308	798 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	YAP6	Q03935	383 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	CSM3	Q04659	317 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	GFD1	Q04839	188 aa	Known RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	JIP5	Q06214	492 aa	Predicted RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	SMD2	Q06217	110 aa	Known RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	SKG3	Q06315	1026 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	YDL124W	Q07551	312 aa	Known RBP	4.69	□□□□□ -1.66
LAS1	YKR063C	DSE3	Q08729	430 aa		4.69	□□□□□ -1.66
LAS1	YKR063C	THS1	P04801	734 aa	Known RBP	4.68	□□□□□ -1.66
LAS1	YKR063C	NUC1	P08466	329 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	EMC1	P25574	760 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	CDC15	P27636	974 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	SPC110	P32380	944 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	ADE17	P38009	592 aa	Known RBP	4.68	□□□□□ -1.66
LAS1	YKR063C	YBL028C	P38202	106 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	CST26	P38226	397 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	LSB1	P53281	241 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	VPS62	P53285	467 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	PBP1	P53297	722 aa	Known RBP	4.68	□□□□□ -1.66
LAS1	YKR063C	BNI5	P53890	448 aa	Known RBP	4.68	□□□□□ -1.66
LAS1	YKR063C	WAR1	Q03631	944 aa		4.68	□□□□□ -1.66
LAS1	YKR063C	MYO1	P08964	1928 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	RPL8A	P17076	256 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	SRP54	P20424	541 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	PWP2	P25635	923 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	CHS3	P29465	1165 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	MFT1	P33441	392 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	OAR1	P35731	278 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	SAP190	P36123	1033 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	STT3	P39007	718 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	MBP1	P39678	833 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	ATF1	P40353	525 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	MAD1	P40957	749 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	STU2	P46675	888 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	SDA1	P53313	767 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	RET3	P53600	189 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	TRM44	Q02648	567 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	VIP1	Q06685	1146 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	SLK19	Q08581	821 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	HMI1	Q12039	706 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	PIN2	Q12057	282 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	FAL1	Q12099	399 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	GSC2	P40989	1895 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	TUS1	Q06412	1307 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	TUF1	P02992	437 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	CLN2	P20438	545 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	HIR1	P32479	840 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	MOH1	P38191	138 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	MND2	P40577	368 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	SQS1	P53866	767 aa	Known RBP	4.67	□□□□□ -1.66
LAS1	YKR063C	PSR2	Q07949	397 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	AFT2	Q08957	416 aa		4.67	□□□□□ -1.66
LAS1	YKR063C	CDC37	P06101	506 aa	Known RBP	4.66	□□□□□ -1.66
LAS1	YKR063C	PRI2	P20457	528 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
LAS1	YKR063C	YKL069W	P36088	180 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	LYS14	P40971	790 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	VTC2	P43585	828 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	FYV8	P46949	817 aa	Known RBP	4.66	□□□□□ -1.66
LAS1	YKR063C	ASE1	P50275	885 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	UBA2	P52488	636 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	VPS4	P52917	437 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	VPS75	P53853	264 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	YLR224W	Q05947	369 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	YCG1	Q06680	1035 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	TPO1	Q07824	586 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	MDM38	Q08179	573 aa		4.66	□□□□□ -1.66
LAS1	YKR063C	ENA1	P13587	1091 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	HPR1	P17629	752 aa	Known RBP	4.65	□□□□□ -1.67
LAS1	YKR063C	SAM2	P19358	384 aa	Known RBP	4.65	□□□□□ -1.67
LAS1	YKR063C	GSY1	P23337	708 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	DCG1	P32460	244 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	STV1	P37296	890 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	PSY4	P38193	441 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	BCD1	P38772	366 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	GIC1	P38785	314 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	YAP1801	P38856	637 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	SPT8	P38915	602 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	NPP2	P39997	493 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	ZRG8	P40021	1076 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	YGR153W	P48238	217 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	ENA2	Q01896	1091 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	YLH47	Q06493	454 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	TLG2	Q08144	397 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	OSW2	Q12202	724 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	NOP58	Q12499	511 aa	Known RBP	4.65	□□□□□ -1.67
LAS1	YKR063C	ENA5	Q12691	1091 aa		4.65	□□□□□ -1.67
LAS1	YKR063C	FOB1	O13329	566 aa		4.64	□□□□□ -1.67
LAS1	YKR063C	CKA2	P19454	339 aa		4.64	□□□□□ -1.67
LAS1	YKR063C	AGP1	P25376	633 aa		4.64	□□□□□ -1.67
LAS1	YKR063C	MRC1	P25588	1096 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms