RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TAX4P47030 604 aa2.91□□□□□ -1.94
SHE2YKL130C ASN1P49089 572 aaKnown RBP2.91□□□□□ -1.94
SHE2YKL130C NMA2P53204 395 aa2.91□□□□□ -1.94
SHE2YKL130C RPN7Q06103 429 aaKnown RBP2.91□□□□□ -1.94
SHE2YKL130C NTG2Q08214 380 aa2.91□□□□□ -1.94
SHE2YKL130C ADR1P07248 1323 aa2.91□□□□□ -1.94
SHE2YKL130C LAM4P38800 1345 aa2.91□□□□□ -1.94
SHE2YKL130C RPL8AP17076 256 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C YKR051WP36142 418 aa2.9□□□□□ -1.95
SHE2YKL130C BIT2P38346 545 aa2.9□□□□□ -1.95
SHE2YKL130C MIT1P40002 666 aa2.9□□□□□ -1.95
SHE2YKL130C YEN1P40028 759 aa2.9□□□□□ -1.95
SHE2YKL130C YNL195CP40168 261 aa2.9□□□□□ -1.95
SHE2YKL130C RSC8P43609 557 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C ATG36P46983 293 aa2.9□□□□□ -1.95
SHE2YKL130C HLJ1P48353 224 aa2.9□□□□□ -1.95
SHE2YKL130C BPL1P48445 690 aaPredicted RBP2.9□□□□□ -1.95
SHE2YKL130C YNR029CP53729 429 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C THI22Q06490 572 aa2.9□□□□□ -1.95
SHE2YKL130C BMS1Q08965 1183 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C ULA1Q12059 462 aa2.9□□□□□ -1.95
SHE2YKL130C CHS5Q12114 671 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C MDM20Q12387 796 aaKnown RBP2.9□□□□□ -1.95
SHE2YKL130C RAD18P10862 487 aa2.89□□□□□ -1.95
SHE2YKL130C MRC1P25588 1096 aa2.89□□□□□ -1.95
SHE2YKL130C APL3P38065 1025 aa2.89□□□□□ -1.95
SHE2YKL130C GID8P40208 455 aa2.89□□□□□ -1.95
SHE2YKL130C PMT6P42934 759 aa2.89□□□□□ -1.95
SHE2YKL130C PMT3P47190 753 aa2.89□□□□□ -1.95
SHE2YKL130C SNP1Q00916 300 aaPredicted RBP2.89□□□□□ -1.95
SHE2YKL130C TFB2Q02939 513 aa2.89□□□□□ -1.95
SHE2YKL130C GSY1P23337 708 aa2.88□□□□□ -1.95
SHE2YKL130C HSL7P38274 827 aa2.88□□□□□ -1.95
SHE2YKL130C PAF1P38351 445 aa2.88□□□□□ -1.95
SHE2YKL130C NUG1P40010 520 aaKnown RBP2.88□□□□□ -1.95
SHE2YKL130C STB2P46679 850 aa2.88□□□□□ -1.95
SHE2YKL130C MPS3P47069 682 aa2.88□□□□□ -1.95
SHE2YKL130C PCL10P53124 433 aa2.88□□□□□ -1.95
SHE2YKL130C NHX1Q04121 633 aa2.88□□□□□ -1.95
SHE2YKL130C YSH1Q06224 779 aaPredicted RBP2.88□□□□□ -1.95
SHE2YKL130C MDM12Q92328 271 aa2.88□□□□□ -1.95
SHE2YKL130C TPK2P06245 380 aa2.87□□□□□ -1.95
SHE2YKL130C FEN2P25621 512 aaKnown RBP2.87□□□□□ -1.95
SHE2YKL130C YKR018CP36114 725 aa2.87□□□□□ -1.95
SHE2YKL130C GRX7P38068 203 aa2.87□□□□□ -1.95
SHE2YKL130C CTP1P38152 299 aa2.87□□□□□ -1.95
SHE2YKL130C APN2P38207 520 aa2.87□□□□□ -1.95
SHE2YKL130C CAF16P43569 289 aa2.87□□□□□ -1.95
SHE2YKL130C MAL11P53048 616 aa2.87□□□□□ -1.95
SHE2YKL130C YNL193WP53870 558 aa2.87□□□□□ -1.95
SHE2YKL130C STP1Q00947 519 aa2.87□□□□□ -1.95
SHE2YKL130C HFD1Q04458 532 aa2.87□□□□□ -1.95
SHE2YKL130C CDC9P04819 755 aa2.86□□□□□ -1.95
SHE2YKL130C SEC15P22224 910 aa2.86□□□□□ -1.95
SHE2YKL130C VBA3P25594 458 aa2.86□□□□□ -1.95
SHE2YKL130C NTH1P32356 751 aa2.86□□□□□ -1.95
SHE2YKL130C HOT13P36078 116 aa2.86□□□□□ -1.95
SHE2YKL130C DSS1P39112 969 aa2.86□□□□□ -1.95
SHE2YKL130C KHA1P40309 873 aa2.86□□□□□ -1.95
SHE2YKL130C CCT5P40413 562 aaKnown RBP2.86□□□□□ -1.95
SHE2YKL130C TPM2P40414 161 aa2.86□□□□□ -1.95
SHE2YKL130C ULP2P40537 1034 aaPredicted RBP2.86□□□□□ -1.95
SHE2YKL130C SET2P46995 733 aaKnown RBP2.86□□□□□ -1.95
SHE2YKL130C RFX1P48743 811 aa2.86□□□□□ -1.95
SHE2YKL130C YGR237CP50089 785 aa2.86□□□□□ -1.95
SHE2YKL130C DIP5P53388 608 aa2.86□□□□□ -1.95
SHE2YKL130C ARP4P80428 489 aa2.86□□□□□ -1.95
SHE2YKL130C LEE1Q02799 301 aaKnown RBP2.86□□□□□ -1.95
SHE2YKL130C NGL2Q03264 515 aaKnown RBP2.86□□□□□ -1.95
SHE2YKL130C YDR179W-AQ03983 463 aa2.86□□□□□ -1.95
SHE2YKL130C THI73Q07904 523 aa2.86□□□□□ -1.95
SHE2YKL130C CIR2Q08822 631 aa2.86□□□□□ -1.95
SHE2YKL130C RKI1Q12189 258 aa2.86□□□□□ -1.95
SHE2YKL130C NUP145P49687 1317 aa2.86□□□□□ -1.95
SHE2YKL130C MBR1P23493 339 aa2.85□□□□□ -1.95
SHE2YKL130C MIH1P23748 554 aa2.85□□□□□ -1.95
SHE2YKL130C YEL1P34225 687 aa2.85□□□□□ -1.95
SHE2YKL130C YIL077CP40508 320 aa2.85□□□□□ -1.95
SHE2YKL130C SDA1P53313 767 aaKnown RBP2.85□□□□□ -1.95
SHE2YKL130C FOL1P53848 824 aa2.85□□□□□ -1.95
SHE2YKL130C UME1Q03010 460 aa2.85□□□□□ -1.95
SHE2YKL130C TDA9Q04545 1251 aa2.85□□□□□ -1.95
SHE2YKL130C ORM2Q06144 216 aa2.85□□□□□ -1.95
SHE2YKL130C YOL057WQ08225 711 aa2.85□□□□□ -1.95
SHE2YKL130C AI5_ALPHAQ9ZZX1 630 aa2.85□□□□□ -1.95
SHE2YKL130C MEF1P25039 761 aa2.84□□□□□ -1.95
SHE2YKL130C HOG1P32485 435 aa2.84□□□□□ -1.95
SHE2YKL130C SEC6P32844 805 aa2.84□□□□□ -1.95
SHE2YKL130C DOT6P40059 670 aaKnown RBP2.84□□□□□ -1.95
SHE2YKL130C PSA1P41940 361 aaKnown RBP2.84□□□□□ -1.95
SHE2YKL130C SUB1P54000 292 aaKnown RBP2.84□□□□□ -1.95
SHE2YKL130C UFO1Q04511 668 aa2.84□□□□□ -1.95
SHE2YKL130C ISA1Q07821 250 aaPredicted RBP2.84□□□□□ -1.95
SHE2YKL130C YLR001CQ07895 862 aa2.84□□□□□ -1.95
SHE2YKL130C FAP7Q12055 197 aaPredicted RBP2.84□□□□□ -1.95
SHE2YKL130C TMA17Q12513 150 aa2.84□□□□□ -1.95
SHE2YKL130C ERG20P08524 352 aaKnown RBP2.83□□□□□ -1.96
SHE2YKL130C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
SHE2YKL130C AAD3P25612 363 aa2.83□□□□□ -1.96
SHE2YKL130C ENP1P38333 483 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms