RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W REC102Q02721 264 aa3.34□□□□□ -1.87
PEP8YJL053W ATP25Q03153 612 aa3.34□□□□□ -1.87
PEP8YJL053W NTG2Q08214 380 aa3.34□□□□□ -1.87
PEP8YJL053W YGR161W-CQ3E744 92 aa3.34□□□□□ -1.87
PEP8YJL053W MDM12Q92328 271 aa3.34□□□□□ -1.87
PEP8YJL053W RNR1P21524 888 aaKnown RBP3.33□□□□□ -1.88
PEP8YJL053W STO1P34160 861 aaKnown RBP3.33□□□□□ -1.88
PEP8YJL053W YHR097CP38809 366 aaKnown RBP3.33□□□□□ -1.88
PEP8YJL053W ALY2P47029 1046 aa3.33□□□□□ -1.88
PEP8YJL053W ATP23P53722 227 aa3.33□□□□□ -1.88
PEP8YJL053W VPS36Q06696 566 aa3.33□□□□□ -1.88
PEP8YJL053W PRP28P23394 588 aa3.32□□□□□ -1.88
PEP8YJL053W ECM32P32644 1121 aaKnown RBP3.32□□□□□ -1.88
PEP8YJL053W BEM3P32873 1128 aa3.32□□□□□ -1.88
PEP8YJL053W GCS1P35197 352 aa3.32□□□□□ -1.88
PEP8YJL053W PIG2P40187 538 aa3.32□□□□□ -1.88
PEP8YJL053W COX18P53239 316 aa3.32□□□□□ -1.88
PEP8YJL053W SCW4P53334 386 aaKnown RBP3.32□□□□□ -1.88
PEP8YJL053W LSC1P53598 329 aaKnown RBP3.32□□□□□ -1.88
PEP8YJL053W ERG13P54839 491 aaKnown RBP3.32□□□□□ -1.88
PEP8YJL053W NOP14Q99207 810 aaKnown RBP3.32□□□□□ -1.88
PEP8YJL053W VBA3P25594 458 aa3.31□□□□□ -1.88
PEP8YJL053W BCS1P32839 456 aa3.31□□□□□ -1.88
PEP8YJL053W PXL1P36166 706 aa3.31□□□□□ -1.88
PEP8YJL053W SPC97P38863 823 aa3.31□□□□□ -1.88
PEP8YJL053W RPN10P38886 268 aaKnown RBP3.31□□□□□ -1.88
PEP8YJL053W YFL052WP43551 465 aa3.31□□□□□ -1.88
PEP8YJL053W SRD1P09007 221 aa3.3□□□□□ -1.88
PEP8YJL053W MEF1P25039 761 aa3.3□□□□□ -1.88
PEP8YJL053W AAD3P25612 363 aa3.3□□□□□ -1.88
PEP8YJL053W PER1P25625 357 aa3.3□□□□□ -1.88
PEP8YJL053W MRPL9P31334 269 aa3.3□□□□□ -1.88
PEP8YJL053W YEL1P34225 687 aa3.3□□□□□ -1.88
PEP8YJL053W MTC2P34246 357 aa3.3□□□□□ -1.88
PEP8YJL053W MAF1P41910 395 aa3.3□□□□□ -1.88
PEP8YJL053W HXT16P47185 567 aa3.3□□□□□ -1.88
PEP8YJL053W YGL081WP53156 320 aa3.3□□□□□ -1.88
PEP8YJL053W TFB2Q02939 513 aa3.3□□□□□ -1.88
PEP8YJL053W NGL2Q03264 515 aaKnown RBP3.3□□□□□ -1.88
PEP8YJL053W COG8Q04632 607 aa3.3□□□□□ -1.88
PEP8YJL053W CDC9P04819 755 aa3.29□□□□□ -1.88
PEP8YJL053W TSR4P25040 408 aa3.29□□□□□ -1.88
PEP8YJL053W DOT6P40059 670 aaKnown RBP3.29□□□□□ -1.88
PEP8YJL053W MNT3P40549 630 aa3.29□□□□□ -1.88
PEP8YJL053W CAF16P43569 289 aa3.29□□□□□ -1.88
PEP8YJL053W PIP2P52960 996 aa3.29□□□□□ -1.88
PEP8YJL053W SNP1Q00916 300 aaPredicted RBP3.29□□□□□ -1.88
PEP8YJL053W YSH1Q06224 779 aaPredicted RBP3.29□□□□□ -1.88
PEP8YJL053W CHS5Q12114 671 aaKnown RBP3.29□□□□□ -1.88
PEP8YJL053W RAD18P10862 487 aa3.28□□□□□ -1.88
PEP8YJL053W HOG1P32485 435 aa3.28□□□□□ -1.88
PEP8YJL053W BIT2P38346 545 aa3.28□□□□□ -1.88
PEP8YJL053W JHD1P40034 492 aa3.28□□□□□ -1.88
PEP8YJL053W YJR142WP47173 342 aa3.28□□□□□ -1.88
PEP8YJL053W HLJ1P48353 224 aa3.28□□□□□ -1.88
PEP8YJL053W YDR179W-AQ03983 463 aa3.28□□□□□ -1.88
PEP8YJL053W ARG7Q04728 441 aa3.28□□□□□ -1.88
PEP8YJL053W YDR338CQ05497 695 aa3.28□□□□□ -1.88
PEP8YJL053W ADR1P07248 1323 aa3.27□□□□□ -1.89
PEP8YJL053W MCD4P36051 919 aa3.27□□□□□ -1.89
PEP8YJL053W CTP1P38152 299 aa3.27□□□□□ -1.89
PEP8YJL053W HSL7P38274 827 aa3.27□□□□□ -1.89
PEP8YJL053W MIP6P38760 659 aaKnown RBP3.27□□□□□ -1.89
PEP8YJL053W PCI8P40512 444 aa3.27□□□□□ -1.89
PEP8YJL053W SNO3P43544 222 aa3.27□□□□□ -1.89
PEP8YJL053W MPS3P47069 682 aa3.27□□□□□ -1.89
PEP8YJL053W NOP9P47077 666 aaKnown RBP3.27□□□□□ -1.89
PEP8YJL053W SDA1P53313 767 aaKnown RBP3.27□□□□□ -1.89
PEP8YJL053W DIP5P53388 608 aa3.27□□□□□ -1.89
PEP8YJL053W YNL193WP53870 558 aa3.27□□□□□ -1.89
PEP8YJL053W NHX1Q04121 633 aa3.27□□□□□ -1.89
PEP8YJL053W FRE7Q12333 620 aa3.27□□□□□ -1.89
PEP8YJL053W ECM3Q99252 613 aa3.27□□□□□ -1.89
PEP8YJL053W TUP1P16649 713 aa3.26□□□□□ -1.89
PEP8YJL053W RPL8AP17076 256 aaKnown RBP3.26□□□□□ -1.89
PEP8YJL053W NTH1P32356 751 aa3.26□□□□□ -1.89
PEP8YJL053W PMT3P47190 753 aa3.26□□□□□ -1.89
PEP8YJL053W NPY1P53164 384 aa3.26□□□□□ -1.89
PEP8YJL053W THI22Q06490 572 aa3.26□□□□□ -1.89
PEP8YJL053W RKI1Q12189 258 aa3.26□□□□□ -1.89
PEP8YJL053W NUP145P49687 1317 aa3.25□□□□□ -1.89
PEP8YJL053W SFL1P20134 766 aa3.25□□□□□ -1.89
PEP8YJL053W PCL2P25693 308 aa3.25□□□□□ -1.89
PEP8YJL053W ASK1P35734 292 aa3.25□□□□□ -1.89
PEP8YJL053W KHA1P40309 873 aa3.25□□□□□ -1.89
PEP8YJL053W NMD5P46970 1048 aa3.25□□□□□ -1.89
PEP8YJL053W DNM1P54861 757 aa3.25□□□□□ -1.89
PEP8YJL053W NUP53Q03790 475 aa3.25□□□□□ -1.89
PEP8YJL053W HMO1Q03973 246 aaKnown RBP3.25□□□□□ -1.89
PEP8YJL053W ENT2Q05785 613 aa3.25□□□□□ -1.89
PEP8YJL053W YLR001CQ07895 862 aa3.25□□□□□ -1.89
PEP8YJL053W PRS5Q12265 496 aaKnown RBP3.25□□□□□ -1.89
PEP8YJL053W MIH1P23748 554 aa3.24□□□□□ -1.89
PEP8YJL053W RSC8P43609 557 aaKnown RBP3.24□□□□□ -1.89
PEP8YJL053W BNA2P47125 453 aa3.24□□□□□ -1.89
PEP8YJL053W UFO1Q04511 668 aa3.24□□□□□ -1.89
PEP8YJL053W RPN7Q06103 429 aaKnown RBP3.24□□□□□ -1.89
PEP8YJL053W GUD1Q07729 489 aa3.24□□□□□ -1.89
PEP8YJL053W PCM1P38628 557 aaKnown RBP3.23□□□□□ -1.89
PEP8YJL053W YAT2P40017 923 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms