RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W FMP52P40008 231 aa4.14□□□□□ -1.75
SNX4YJL036W EMP65P40085 556 aa4.14□□□□□ -1.75
SNX4YJL036W CCT5P40413 562 aaKnown RBP4.14□□□□□ -1.75
SNX4YJL036W YFL052WP43551 465 aa4.14□□□□□ -1.75
SNX4YJL036W RSC8P43609 557 aaKnown RBP4.14□□□□□ -1.75
SNX4YJL036W SLD3P53135 668 aa4.14□□□□□ -1.75
SNX4YJL036W PTA1Q01329 785 aaPredicted RBP4.14□□□□□ -1.75
SNX4YJL036W SKY1Q03656 742 aa4.14□□□□□ -1.75
SNX4YJL036W YHM2Q04013 314 aa4.14□□□□□ -1.75
SNX4YJL036W YPR027CQ12079 277 aa4.14□□□□□ -1.75
SNX4YJL036W RRP6Q12149 733 aaKnown RBP4.14□□□□□ -1.75
SNX4YJL036W YOR022CQ12204 715 aa4.14□□□□□ -1.75
SNX4YJL036W ADY2P25613 283 aa4.13□□□□□ -1.75
SNX4YJL036W TMT1P32643 299 aa4.13□□□□□ -1.75
SNX4YJL036W HIS7P33734 552 aaKnown RBP4.13□□□□□ -1.75
SNX4YJL036W YKR051WP36142 418 aa4.13□□□□□ -1.75
SNX4YJL036W ERP2P39704 215 aa4.13□□□□□ -1.75
SNX4YJL036W PFA3P42836 336 aa4.13□□□□□ -1.75
SNX4YJL036W BFA1P47113 574 aa4.13□□□□□ -1.75
SNX4YJL036W THI7Q05998 598 aa4.13□□□□□ -1.75
SNX4YJL036W RPN7Q06103 429 aaKnown RBP4.13□□□□□ -1.75
SNX4YJL036W PEX15Q08215 383 aa4.13□□□□□ -1.75
SNX4YJL036W ATG11Q12527 1178 aa4.13□□□□□ -1.75
SNX4YJL036W YBR182C-AQ8TGU6 64 aa4.13□□□□□ -1.75
SNX4YJL036W HEM12P32347 362 aaPredicted RBP4.12□□□□□ -1.75
SNX4YJL036W CBR1P38626 284 aaKnown RBP4.12□□□□□ -1.75
SNX4YJL036W TEL2P53038 688 aa4.12□□□□□ -1.75
SNX4YJL036W PAP2P53632 584 aaKnown RBP4.12□□□□□ -1.75
SNX4YJL036W RPS21AP0C0V8 87 aaKnown RBP4.11□□□□□ -1.75
SNX4YJL036W RPA135P22138 1203 aaKnown RBP4.11□□□□□ -1.75
SNX4YJL036W YKU70P32807 602 aa4.11□□□□□ -1.75
SNX4YJL036W BCD1P38772 366 aa4.11□□□□□ -1.75
SNX4YJL036W HOS4P40480 1083 aa4.11□□□□□ -1.75
SNX4YJL036W HIS6P40545 261 aa4.11□□□□□ -1.75
SNX4YJL036W RNR4P49723 345 aaKnown RBP4.11□□□□□ -1.75
SNX4YJL036W SVL3Q03088 825 aaKnown RBP4.11□□□□□ -1.75
SNX4YJL036W ECM38Q05902 660 aaPredicted RBP4.11□□□□□ -1.75
SNX4YJL036W TGL5Q12043 749 aa4.11□□□□□ -1.75
SNX4YJL036W RPS21BQ3E754 87 aaKnown RBP4.11□□□□□ -1.75
SNX4YJL036W APA1P16550 321 aaKnown RBP4.1□□□□□ -1.75
SNX4YJL036W PHO81P17442 1178 aa4.1□□□□□ -1.75
SNX4YJL036W SER1P33330 395 aaKnown RBP4.1□□□□□ -1.75
SNX4YJL036W OAF3P36023 863 aa4.1□□□□□ -1.75
SNX4YJL036W SIC1P38634 284 aa4.1□□□□□ -1.75
SNX4YJL036W YHL041WP38730 149 aa4.1□□□□□ -1.75
SNX4YJL036W HXT6P39003 570 aaKnown RBP4.1□□□□□ -1.75
SNX4YJL036W HXT7P39004 570 aa4.1□□□□□ -1.75
SNX4YJL036W BNA2P47125 453 aa4.1□□□□□ -1.75
SNX4YJL036W UBC11P52492 156 aa4.1□□□□□ -1.75
SNX4YJL036W YAP1802P53309 568 aa4.1□□□□□ -1.75
SNX4YJL036W SMX3P54999 86 aaPredicted RBP4.1□□□□□ -1.75
SNX4YJL036W COG4Q06096 861 aa4.1□□□□□ -1.75
SNX4YJL036W THI21Q08975 551 aa4.1□□□□□ -1.75
SNX4YJL036W HFI1Q12060 488 aa4.1□□□□□ -1.75
SNX4YJL036W Q0142Q9ZZW4 58 aa4.1□□□□□ -1.75
SNX4YJL036W SEC65P29478 273 aa4.09□□□□□ -1.75
SNX4YJL036W SSH4P32343 579 aa4.09□□□□□ -1.75
SNX4YJL036W MNN4P36044 1178 aa4.09□□□□□ -1.75
SNX4YJL036W YKR075CP36155 307 aa4.09□□□□□ -1.75
SNX4YJL036W MAL31P38156 614 aa4.09□□□□□ -1.75
SNX4YJL036W YBR259WP38338 688 aa4.09□□□□□ -1.75
SNX4YJL036W RRP8P38961 392 aaKnown RBP4.09□□□□□ -1.75
SNX4YJL036W YJL206CP39529 758 aa4.09□□□□□ -1.75
SNX4YJL036W VID27P40157 782 aa4.09□□□□□ -1.75
SNX4YJL036W SAP185P40856 1058 aa4.09□□□□□ -1.75
SNX4YJL036W ZIP2P53061 704 aa4.09□□□□□ -1.75
SNX4YJL036W APM1Q00776 475 aaPredicted RBP4.09□□□□□ -1.75
SNX4YJL036W ASM4Q05166 528 aa4.09□□□□□ -1.75
SNX4YJL036W APM4Q99186 491 aa4.09□□□□□ -1.75
SNX4YJL036W YLR149CQ99296 730 aa4.09□□□□□ -1.75
SNX4YJL036W DBF20P32328 564 aa4.08□□□□□ -1.76
SNX4YJL036W RPN12P32496 274 aa4.08□□□□□ -1.76
SNX4YJL036W YKR018CP36114 725 aa4.08□□□□□ -1.76
SNX4YJL036W EXO84P38261 753 aa4.08□□□□□ -1.76
SNX4YJL036W REV7P38927 245 aa4.08□□□□□ -1.76
SNX4YJL036W BAP3P41815 604 aa4.08□□□□□ -1.76
SNX4YJL036W YRB30P53107 440 aaPredicted RBP4.08□□□□□ -1.76
SNX4YJL036W PCL10P53124 433 aa4.08□□□□□ -1.76
SNX4YJL036W PSR2Q07949 397 aa4.08□□□□□ -1.76
SNX4YJL036W DCS2Q12123 353 aa4.08□□□□□ -1.76
SNX4YJL036W TAF3Q12297 353 aa4.08□□□□□ -1.76
SNX4YJL036W YOL114CQ12322 202 aa4.08□□□□□ -1.76
SNX4YJL036W SPO11P23179 398 aa4.07□□□□□ -1.76
SNX4YJL036W FAT1P38225 669 aa4.07□□□□□ -1.76
SNX4YJL036W GLO1P50107 326 aa4.07□□□□□ -1.76
SNX4YJL036W HOL1P53389 586 aa4.07□□□□□ -1.76
SNX4YJL036W SEC5P89102 971 aa4.07□□□□□ -1.76
SNX4YJL036W GPD1Q00055 391 aaKnown RBP4.07□□□□□ -1.76
SNX4YJL036W GPR1Q12361 961 aa4.07□□□□□ -1.76
SNX4YJL036W MSS18P08593 268 aa4.06□□□□□ -1.76
SNX4YJL036W ECM1P39715 212 aa4.06□□□□□ -1.76
SNX4YJL036W NOC2P39744 710 aaKnown RBP4.06□□□□□ -1.76
SNX4YJL036W ACA1P39970 489 aa4.06□□□□□ -1.76
SNX4YJL036W QRI7P43122 407 aa4.06□□□□□ -1.76
SNX4YJL036W IML2P47031 731 aa4.06□□□□□ -1.76
SNX4YJL036W MTR3P48240 250 aaPredicted RBP4.06□□□□□ -1.76
SNX4YJL036W CNM67P53865 581 aaKnown RBP4.06□□□□□ -1.76
SNX4YJL036W YML131WQ03102 365 aa4.06□□□□□ -1.76
SNX4YJL036W GAD1Q04792 585 aa4.06□□□□□ -1.76
SNX4YJL036W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms