RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W TPK2P06245 380 aa4.05□□□□□ -1.76
RPF1YHR088W STE12P13574 688 aa4.05□□□□□ -1.76
RPF1YHR088W TIM23P32897 222 aa4.05□□□□□ -1.76
RPF1YHR088W PEX6P33760 1030 aa4.05□□□□□ -1.76
RPF1YHR088W AKL1P38080 1108 aaKnown RBP4.05□□□□□ -1.76
RPF1YHR088W BUD6P41697 788 aa4.05□□□□□ -1.76
RPF1YHR088W BRE5P53741 515 aaKnown RBP4.05□□□□□ -1.76
RPF1YHR088W LAM4P38800 1345 aa4.04□□□□□ -1.76
RPF1YHR088W YMC1P32331 307 aa4.04□□□□□ -1.76
RPF1YHR088W PET127P32606 800 aa4.04□□□□□ -1.76
RPF1YHR088W MAL31P38156 614 aa4.04□□□□□ -1.76
RPF1YHR088W YHR097CP38809 366 aaKnown RBP4.04□□□□□ -1.76
RPF1YHR088W CCT5P40413 562 aaKnown RBP4.04□□□□□ -1.76
RPF1YHR088W PMT6P42934 759 aa4.04□□□□□ -1.76
RPF1YHR088W ASN1P49089 572 aaKnown RBP4.04□□□□□ -1.76
RPF1YHR088W DAK1P54838 584 aaKnown RBP4.04□□□□□ -1.76
RPF1YHR088W LEE1Q02799 301 aaKnown RBP4.04□□□□□ -1.76
RPF1YHR088W UFO1Q04511 668 aa4.04□□□□□ -1.76
RPF1YHR088W ATG33Q06485 197 aa4.04□□□□□ -1.76
RPF1YHR088W ISA1Q07821 250 aaPredicted RBP4.04□□□□□ -1.76
RPF1YHR088W PHO8P11491 566 aa4.03□□□□□ -1.76
RPF1YHR088W APN1P22936 367 aa4.03□□□□□ -1.76
RPF1YHR088W PRP22P24384 1145 aaKnown RBP4.03□□□□□ -1.76
RPF1YHR088W MEF1P25039 761 aa4.03□□□□□ -1.76
RPF1YHR088W YPT7P32939 208 aa4.03□□□□□ -1.76
RPF1YHR088W YKL091CP33324 310 aaKnown RBP4.03□□□□□ -1.76
RPF1YHR088W MNN4P36044 1178 aa4.03□□□□□ -1.76
RPF1YHR088W PBP2P38151 413 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
RPF1YHR088W COS111P38308 924 aa4.03□□□□□ -1.76
RPF1YHR088W YNL195CP40168 261 aa4.03□□□□□ -1.76
RPF1YHR088W NUP82P40368 713 aa4.03□□□□□ -1.76
RPF1YHR088W XBP1P40489 647 aa4.03□□□□□ -1.76
RPF1YHR088W YIL077CP40508 320 aa4.03□□□□□ -1.76
RPF1YHR088W RFX1P48743 811 aa4.03□□□□□ -1.76
RPF1YHR088W NMA2P53204 395 aa4.03□□□□□ -1.76
RPF1YHR088W YDR179W-AQ03983 463 aa4.03□□□□□ -1.76
RPF1YHR088W HFD1Q04458 532 aa4.03□□□□□ -1.76
RPF1YHR088W YFT2Q06676 274 aa4.03□□□□□ -1.76
RPF1YHR088W IRC3Q06683 689 aa4.03□□□□□ -1.76
RPF1YHR088W GIN4Q12263 1142 aa4.03□□□□□ -1.76
RPF1YHR088W PCL2P25693 308 aa4.02□□□□□ -1.77
RPF1YHR088W MSS1P32559 526 aaPredicted RBP4.02□□□□□ -1.77
RPF1YHR088W YHR202WP38887 602 aa4.02□□□□□ -1.77
RPF1YHR088W THI6P41835 540 aa4.02□□□□□ -1.77
RPF1YHR088W BIT61P47041 543 aa4.02□□□□□ -1.77
RPF1YHR088W VBA4Q04602 768 aaKnown RBP4.02□□□□□ -1.77
RPF1YHR088W VHS3Q08438 674 aa4.02□□□□□ -1.77
RPF1YHR088W RGT2Q12300 763 aa4.02□□□□□ -1.77
RPF1YHR088W FRS1P15624 595 aaKnown RBP4.01□□□□□ -1.77
RPF1YHR088W YUR1P26725 428 aa4.01□□□□□ -1.77
RPF1YHR088W YKR075CP36155 307 aa4.01□□□□□ -1.77
RPF1YHR088W PCM1P38628 557 aaKnown RBP4.01□□□□□ -1.77
RPF1YHR088W DIP5P53388 608 aa4.01□□□□□ -1.77
RPF1YHR088W CPR8P53728 308 aa4.01□□□□□ -1.77
RPF1YHR088W POB3Q04636 552 aaKnown RBP4.01□□□□□ -1.77
RPF1YHR088W IZH3Q07959 543 aa4.01□□□□□ -1.77
RPF1YHR088W DCS2Q12123 353 aa4.01□□□□□ -1.77
RPF1YHR088W NUP1P20676 1076 aa4□□□□□ -1.77
RPF1YHR088W HOT13P36078 116 aa4□□□□□ -1.77
RPF1YHR088W BEM4P39011 633 aa4□□□□□ -1.77
RPF1YHR088W ULP2P40537 1034 aaPredicted RBP4□□□□□ -1.77
RPF1YHR088W OSW7P43611 510 aa4□□□□□ -1.77
RPF1YHR088W TAX4P47030 604 aa4□□□□□ -1.77
RPF1YHR088W MPS1P54199 764 aa4□□□□□ -1.77
RPF1YHR088W ORM2Q06144 216 aa4□□□□□ -1.77
RPF1YHR088W RPS9BP05755 195 aaKnown RBP3.99□□□□□ -1.77
RPF1YHR088W HMG1P12683 1054 aa3.99□□□□□ -1.77
RPF1YHR088W SFL1P20134 766 aa3.99□□□□□ -1.77
RPF1YHR088W MBR1P23493 339 aa3.99□□□□□ -1.77
RPF1YHR088W THI4P32318 326 aa3.99□□□□□ -1.77
RPF1YHR088W OCA5P38738 679 aa3.99□□□□□ -1.77
RPF1YHR088W YGL117WP53133 265 aa3.99□□□□□ -1.77
RPF1YHR088W SNF12P53628 566 aa3.99□□□□□ -1.77
RPF1YHR088W CEF1Q03654 590 aaPredicted RBP3.99□□□□□ -1.77
RPF1YHR088W PPN1Q04119 674 aa3.99□□□□□ -1.77
RPF1YHR088W ARG7Q04728 441 aa3.99□□□□□ -1.77
RPF1YHR088W VPS36Q06696 566 aa3.99□□□□□ -1.77
RPF1YHR088W PIH1P38768 344 aa3.98□□□□□ -1.77
RPF1YHR088W BFA1P47113 574 aa3.98□□□□□ -1.77
RPF1YHR088W NUG1P40010 520 aaKnown RBP3.97□□□□□ -1.77
RPF1YHR088W PSA1P41940 361 aaKnown RBP3.97□□□□□ -1.77
RPF1YHR088W AIM14P53109 570 aa3.97□□□□□ -1.77
RPF1YHR088W STE4P18851 423 aa3.96□□□□□ -1.78
RPF1YHR088W IMG2P25642 146 aaPredicted RBP3.96□□□□□ -1.78
RPF1YHR088W PXA1P41909 870 aa3.96□□□□□ -1.78
RPF1YHR088W SCS3P53012 380 aa3.96□□□□□ -1.78
RPF1YHR088W SPO1P53541 631 aa3.96□□□□□ -1.78
RPF1YHR088W FDC1Q03034 503 aa3.96□□□□□ -1.78
RPF1YHR088W YMR210WQ03649 449 aa3.96□□□□□ -1.78
RPF1YHR088W AI5_ALPHAQ9ZZX1 630 aa3.96□□□□□ -1.78
RPF1YHR088W YMR084WA2P2R3 262 aa3.95□□□□□ -1.78
RPF1YHR088W PMA2P19657 947 aa3.95□□□□□ -1.78
RPF1YHR088W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
RPF1YHR088W AAD3P25612 363 aa3.95□□□□□ -1.78
RPF1YHR088W ELF1P36053 145 aa3.95□□□□□ -1.78
RPF1YHR088W STB2P46679 850 aa3.95□□□□□ -1.78
RPF1YHR088W STP1Q00947 519 aa3.95□□□□□ -1.78
RPF1YHR088W ZPS1Q12512 249 aa3.95□□□□□ -1.78
RPF1YHR088W YKU70P32807 602 aa3.94□□□□□ -1.78
RPF1YHR088W APD1P38281 316 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms