RNA–Protein interactions for RNA: YHR079C

IRE1, Transcript of Serine-threonine kinase and endoribonuclease, yeastyeast

Gene IRE1, Length 3,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRE1YHR079C SPE1P08432 466 aa2.06□□□□□ -2.08
IRE1YHR079C SEC18P18759 758 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C RSC6P25632 483 aa2.06□□□□□ -2.08
IRE1YHR079C MCM10P32354 571 aa2.06□□□□□ -2.08
IRE1YHR079C MSS1P32559 526 aaPredicted RBP2.06□□□□□ -2.08
IRE1YHR079C TSA1P34760 196 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C MPE1P35728 441 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C YBR138CP38277 524 aa2.06□□□□□ -2.08
IRE1YHR079C LYS9P38999 446 aa2.06□□□□□ -2.08
IRE1YHR079C SWD1P39706 426 aa2.06□□□□□ -2.08
IRE1YHR079C GET2P40056 285 aa2.06□□□□□ -2.08
IRE1YHR079C YNL195CP40168 261 aa2.06□□□□□ -2.08
IRE1YHR079C YIL108WP40483 696 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C GCV2P49095 1034 aa2.06□□□□□ -2.08
IRE1YHR079C SLD3P53135 668 aa2.06□□□□□ -2.08
IRE1YHR079C ASI2P53895 289 aa2.06□□□□□ -2.08
IRE1YHR079C ORC4P54791 529 aa2.06□□□□□ -2.08
IRE1YHR079C YDR132CQ03900 495 aa2.06□□□□□ -2.08
IRE1YHR079C TMA64Q04600 565 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C SDH5Q08230 162 aa2.06□□□□□ -2.08
IRE1YHR079C GAL10P04397 699 aa2.06□□□□□ -2.08
IRE1YHR079C MSM1P22438 575 aa2.06□□□□□ -2.08
IRE1YHR079C ADP1P25371 1049 aa2.06□□□□□ -2.08
IRE1YHR079C AIM26P32858 118 aa2.06□□□□□ -2.08
IRE1YHR079C YKR073CP36153 106 aa2.06□□□□□ -2.08
IRE1YHR079C YHR112CP38716 378 aa2.06□□□□□ -2.08
IRE1YHR079C LAM1P38851 1228 aa2.06□□□□□ -2.08
IRE1YHR079C NAB3P38996 802 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
IRE1YHR079C STT3P39007 718 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C FMP10P40098 244 aa2.06□□□□□ -2.08
IRE1YHR079C SAP185P40856 1058 aa2.06□□□□□ -2.08
IRE1YHR079C GTS1P40956 396 aa2.06□□□□□ -2.08
IRE1YHR079C MET12P46151 657 aa2.06□□□□□ -2.08
IRE1YHR079C SSY5P47002 699 aa2.06□□□□□ -2.08
IRE1YHR079C YGR035CP53222 116 aa2.06□□□□□ -2.08
IRE1YHR079C TRM8Q12009 286 aa2.06□□□□□ -2.08
IRE1YHR079C HRP1Q99383 534 aaKnown RBP2.06□□□□□ -2.08
IRE1YHR079C VTH1P40438 1549 aa2.05□□□□□ -2.08
IRE1YHR079C VTH2P40890 1549 aa2.05□□□□□ -2.08
IRE1YHR079C CYC1P00044 109 aaPredicted RBP2.05□□□□□ -2.08
IRE1YHR079C MTF2P10849 440 aa2.05□□□□□ -2.08
IRE1YHR079C CHS2P14180 963 aa2.05□□□□□ -2.08
IRE1YHR079C PRE4P30657 266 aa2.05□□□□□ -2.08
IRE1YHR079C SIC1P38634 284 aa2.05□□□□□ -2.08
IRE1YHR079C SRP68P38687 599 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C RPN10P38886 268 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C PUG1P40100 303 aa2.05□□□□□ -2.08
IRE1YHR079C YIL092WP40497 633 aa2.05□□□□□ -2.08
IRE1YHR079C VPS62P53285 467 aa2.05□□□□□ -2.08
IRE1YHR079C YNR014WP53719 212 aa2.05□□□□□ -2.08
IRE1YHR079C ARG5,6Q01217 863 aa2.05□□□□□ -2.08
IRE1YHR079C YPR196WQ06595 470 aa2.05□□□□□ -2.08
IRE1YHR079C THI72Q08579 599 aa2.05□□□□□ -2.08
IRE1YHR079C PDR5P33302 1511 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C PRC1P00729 532 aa2.05□□□□□ -2.08
IRE1YHR079C RPS17AP02407 136 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C SNF1P06782 633 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C RPS17BP14127 136 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C HSC82P15108 705 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C CBF2P32504 956 aa2.05□□□□□ -2.08
IRE1YHR079C RMA1P36001 430 aaKnown RBP2.05□□□□□ -2.08
IRE1YHR079C SET3P36124 751 aa2.05□□□□□ -2.08
IRE1YHR079C IFA38P38286 347 aa2.05□□□□□ -2.08
IRE1YHR079C YAP1802P53309 568 aa2.05□□□□□ -2.08
IRE1YHR079C GTR1Q00582 310 aa2.05□□□□□ -2.08
IRE1YHR079C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
IRE1YHR079C ARP7Q12406 477 aa2.05□□□□□ -2.08
IRE1YHR079C NSI1Q12457 570 aa2.05□□□□□ -2.08
IRE1YHR079C KCS1Q12494 1050 aa2.05□□□□□ -2.08
IRE1YHR079C SPS1P08458 490 aa2.04□□□□□ -2.08
IRE1YHR079C YEL076C-AP0CX16 216 aa2.04□□□□□ -2.08
IRE1YHR079C YLR464WP0CX17 216 aa2.04□□□□□ -2.08
IRE1YHR079C IMP2'P32351 346 aa2.04□□□□□ -2.08
IRE1YHR079C YKL133CP36066 463 aa2.04□□□□□ -2.08
IRE1YHR079C YHR078WP38799 552 aa2.04□□□□□ -2.08
IRE1YHR079C AXL2P38928 823 aa2.04□□□□□ -2.08
IRE1YHR079C YEL076CP39971 216 aa2.04□□□□□ -2.08
IRE1YHR079C SCS2P40075 244 aaKnown RBP2.04□□□□□ -2.08
IRE1YHR079C DPH1P40487 425 aaKnown RBP2.04□□□□□ -2.08
IRE1YHR079C TEP1P53916 434 aa2.04□□□□□ -2.08
IRE1YHR079C TPO1Q07824 586 aa2.04□□□□□ -2.08
IRE1YHR079C NEW1Q08972 1196 aaKnown RBP2.04□□□□□ -2.08
IRE1YHR079C NUR1Q12066 484 aa2.04□□□□□ -2.08
IRE1YHR079C DBP10Q12389 995 aaKnown RBP2.04□□□□□ -2.08
IRE1YHR079C SOD2P00447 233 aa2.04□□□□□ -2.08
IRE1YHR079C HSF1P10961 833 aa2.04□□□□□ -2.08
IRE1YHR079C ARG1P22768 420 aa2.04□□□□□ -2.08
IRE1YHR079C PHO3P24031 467 aa2.04□□□□□ -2.08
IRE1YHR079C MCM3P24279 971 aaKnown RBP2.04□□□□□ -2.08
IRE1YHR079C YCL049CP25577 312 aa2.04□□□□□ -2.08
IRE1YHR079C APL1P27351 700 aa2.04□□□□□ -2.08
IRE1YHR079C PRP45P28004 379 aaPredicted RBP2.04□□□□□ -2.08
IRE1YHR079C CRG1P38892 291 aaRIP-Chip data2.04□□□□□ -2.08not detected
IRE1YHR079C ERP2P39704 215 aa2.04□□□□□ -2.08
IRE1YHR079C ZRG8P40021 1076 aa2.04□□□□□ -2.08
IRE1YHR079C EMP65P40085 556 aa2.04□□□□□ -2.08
IRE1YHR079C ASK10P48361 1146 aa2.04□□□□□ -2.08
IRE1YHR079C PEF1P53238 335 aa2.04□□□□□ -2.08
IRE1YHR079C YPL034WQ03083 165 aa2.04□□□□□ -2.08
IRE1YHR079C TRM13Q12383 476 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms