RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	RSC8	P43609	557 aa	Known RBP	3.79	□□□□□ -1.8
VMA10	YHR039C-A	UBC11	P52492	156 aa		3.79	□□□□□ -1.8
VMA10	YHR039C-A	NOP15	P53927	220 aa	Predicted RBP	3.79	□□□□□ -1.8
VMA10	YHR039C-A	CTK1	Q03957	528 aa	Known RBP	3.79	□□□□□ -1.8
VMA10	YHR039C-A	MCM21	Q06675	368 aa		3.79	□□□□□ -1.8
VMA10	YHR039C-A	GLN4	P13188	809 aa	Known RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	CDC26	P14724	124 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	YEF3	P16521	1044 aa	Known RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	IMG2	P25642	146 aa	Predicted RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	PTP2	P29461	750 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	LYS9	P38999	446 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	VID28	P40547	921 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	IES1	P43579	692 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	RNR4	P49723	345 aa	Known RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	UBX4	P54730	416 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	REC102	Q02721	264 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	HMO1	Q03973	246 aa	Known RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	ACF2	Q12168	779 aa		3.78	□□□□□ -1.8
VMA10	YHR039C-A	HRP1	Q99383	534 aa	Known RBP	3.78	□□□□□ -1.8
VMA10	YHR039C-A	RPS17A	P02407	136 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	RPS17B	P14127	136 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	HCA4	P20448	770 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	RNR1	P21524	888 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	FUI1	P38196	639 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	CCT3	P39077	534 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	FMP52	P40008	231 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	IES5	P40060	125 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	YMR210W	Q03649	449 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	YPS7	Q06325	596 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	MLC2	Q06580	163 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	MCH5	Q08777	521 aa		3.77	□□□□□ -1.81
VMA10	YHR039C-A	RRP6	Q12149	733 aa	Known RBP	3.77	□□□□□ -1.81
VMA10	YHR039C-A	PYC1	P11154	1178 aa	Known RBP	3.76	□□□□□ -1.81
VMA10	YHR039C-A	PGI1	P12709	554 aa	Known RBP	3.76	□□□□□ -1.81
VMA10	YHR039C-A	IME1	P21190	360 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	YPT7	P32939	208 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	YKL133C	P36066	463 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	YHL017W	P38745	532 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	FMO1	P38866	432 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	NUP60	P39705	539 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	GET2	P40056	285 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	YNL195C	P40168	261 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	CNM67	P53865	581 aa	Known RBP	3.76	□□□□□ -1.81
VMA10	YHR039C-A	TMN2	Q04562	672 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	RGC1	Q06108	1083 aa	Known RBP	3.76	□□□□□ -1.81
VMA10	YHR039C-A	STP4	Q07351	490 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	ISA1	Q07821	250 aa	Predicted RBP	3.76	□□□□□ -1.81
VMA10	YHR039C-A	VHS3	Q08438	674 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	SGO1	Q08490	590 aa		3.76	□□□□□ -1.81
VMA10	YHR039C-A	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
VMA10	YHR039C-A	MVD1	P32377	396 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	MF(ALPHA)2	P32435	120 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	HXT4	P32467	576 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	PET127	P32606	800 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	SRP68	P38687	599 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	PCL5	P38794	229 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	REV7	P38927	245 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	IRC5	P43610	853 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	NOP9	P47077	666 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	UBA2	P52488	636 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	PAN2	P53010	1115 aa	Predicted RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	TEL2	P53038	688 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	COX18	P53239	316 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	RIA1	P53893	1110 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	CEG1	Q01159	459 aa	Predicted RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	TIM44	Q01852	431 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	RCR2	Q03446	210 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	ATG16	Q03818	150 aa		3.75	□□□□□ -1.81
VMA10	YHR039C-A	VMS1	Q04311	632 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	NGL1	Q08213	363 aa	Known RBP	3.75	□□□□□ -1.81
VMA10	YHR039C-A	SIR3	P06701	978 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	FRS1	P15624	595 aa	Known RBP	3.74	□□□□□ -1.81
VMA10	YHR039C-A	HOP1	P20050	605 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	PEX1	P24004	1043 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	YHL041W	P38730	149 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	RIM4	P38741	713 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	SFB3	P38810	929 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
VMA10	YHR039C-A	DUN1	P39009	513 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	EAF5	P39995	279 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	HIS6	P40545	261 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	PUS4	P48567	403 aa	Known RBP	3.74	□□□□□ -1.81
VMA10	YHR039C-A	YGR021W	P53212	290 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	HOL1	P53389	586 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	CEF1	Q03654	590 aa	Predicted RBP	3.74	□□□□□ -1.81
VMA10	YHR039C-A	HBT1	Q07653	1046 aa	Known RBP	3.74	□□□□□ -1.81
VMA10	YHR039C-A	CWC2	Q12046	339 aa	Predicted RBP	3.74	□□□□□ -1.81
VMA10	YHR039C-A	YKL033W-A	Q86ZR7	236 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	ECM3	Q99252	613 aa		3.74	□□□□□ -1.81
VMA10	YHR039C-A	MSS18	P08593	268 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	TRX2	P22803	104 aa	Known RBP	3.73	□□□□□ -1.81
VMA10	YHR039C-A	DGR2	P32330	852 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	SWE1	P32944	819 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	YIL092W	P40497	633 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	SDS3	P40505	327 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	BUD8	P41698	603 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	QRI7	P43122	407 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	ENP2	P48234	707 aa	Known RBP	3.73	□□□□□ -1.81
VMA10	YHR039C-A	GND2	P53319	492 aa		3.73	□□□□□ -1.81
VMA10	YHR039C-A	SSL2	Q00578	843 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms