RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C RPS17BP14127 136 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C MIH1P23748 554 aa2.35□□□□□ -2.03
UBR1YGR184C RPC53P25441 422 aa2.35□□□□□ -2.03
UBR1YGR184C LRG1P35688 1017 aa2.35□□□□□ -2.03
UBR1YGR184C SHR5P41912 237 aa2.35□□□□□ -2.03
UBR1YGR184C ORC4P54791 529 aa2.35□□□□□ -2.03
UBR1YGR184C ERO1Q03103 563 aa2.35□□□□□ -2.03
UBR1YGR184C YDR341CQ05506 607 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C NUS1Q12063 375 aa2.35□□□□□ -2.03
UBR1YGR184C HSP42Q12329 375 aa2.35□□□□□ -2.03
UBR1YGR184C RPL19AP0CX82 189 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C RPL19BP0CX83 189 aaPredicted RBP2.35□□□□□ -2.03
UBR1YGR184C PRE10P21242 288 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
UBR1YGR184C SDH2P21801 266 aa2.35□□□□□ -2.03
UBR1YGR184C ASH1P34233 588 aa2.35□□□□□ -2.03
UBR1YGR184C RRF1P38771 230 aa2.35□□□□□ -2.03
UBR1YGR184C CTF8P38877 133 aa2.35□□□□□ -2.03
UBR1YGR184C FUN12P39730 1002 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C REC102Q02721 264 aa2.35□□□□□ -2.03
UBR1YGR184C RMT2Q03305 412 aa2.35□□□□□ -2.03
UBR1YGR184C DOT1Q04089 582 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C FBP1P09201 348 aa2.35□□□□□ -2.03
UBR1YGR184C CDC24P11433 854 aaPredicted RBP2.35□□□□□ -2.03
UBR1YGR184C CTF13P35203 478 aa2.35□□□□□ -2.03
UBR1YGR184C MIC60P36112 540 aa2.35□□□□□ -2.03
UBR1YGR184C YJL206CP39529 758 aa2.35□□□□□ -2.03
UBR1YGR184C MTC3P53077 123 aa2.35□□□□□ -2.03
UBR1YGR184C BTN2P53286 410 aa2.35□□□□□ -2.03
UBR1YGR184C OGG1P53397 376 aaPredicted RBP2.35□□□□□ -2.03
UBR1YGR184C ARP5P53946 755 aa2.35□□□□□ -2.03
UBR1YGR184C YMR074CQ04773 145 aa2.35□□□□□ -2.03
UBR1YGR184C DAL5P15365 543 aa2.35□□□□□ -2.03
UBR1YGR184C YNG2P38806 282 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C TAD1P53065 400 aa2.35□□□□□ -2.03
UBR1YGR184C AIM14P53109 570 aa2.35□□□□□ -2.03
UBR1YGR184C PUS2P53167 370 aa2.35□□□□□ -2.03
UBR1YGR184C EOS1P53938 366 aa2.35□□□□□ -2.03
UBR1YGR184C YMR210WQ03649 449 aa2.35□□□□□ -2.03
UBR1YGR184C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
UBR1YGR184C PUS7Q08647 676 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C HUA2Q12134 243 aa2.35□□□□□ -2.03
UBR1YGR184C AIR2Q12476 344 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C NUC1P08466 329 aa2.35□□□□□ -2.03
UBR1YGR184C CBP3P21560 335 aa2.35□□□□□ -2.03
UBR1YGR184C DHR2P36009 735 aaPredicted RBP2.35□□□□□ -2.03
UBR1YGR184C UBS1P38290 277 aa2.35□□□□□ -2.03
UBR1YGR184C SIC1P38634 284 aa2.35□□□□□ -2.03
UBR1YGR184C STT3P39007 718 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C PHM8P40025 321 aa2.35□□□□□ -2.03
UBR1YGR184C SEC27P41811 889 aaKnown RBP2.35□□□□□ -2.03
UBR1YGR184C RMD8P43620 662 aa2.35□□□□□ -2.03
UBR1YGR184C AAD10P47182 288 aa2.35□□□□□ -2.03
UBR1YGR184C ATP22P50273 684 aaPredicted RBP2.35□□□□□ -2.03
UBR1YGR184C IRC3Q06683 689 aa2.35□□□□□ -2.03
UBR1YGR184C NUR1Q12066 484 aa2.35□□□□□ -2.03
UBR1YGR184C JIP3O13555 125 aa2.34□□□□□ -2.03
UBR1YGR184C DAL7P21826 554 aa2.34□□□□□ -2.03
UBR1YGR184C CLB4P24871 460 aa2.34□□□□□ -2.03
UBR1YGR184C ECM21P38167 1117 aaKnown RBP2.34□□□□□ -2.03
UBR1YGR184C OTU2P38747 307 aaKnown RBP2.34□□□□□ -2.03
UBR1YGR184C RSC1P53236 928 aa2.34□□□□□ -2.03
UBR1YGR184C HDA1P53973 706 aa2.34□□□□□ -2.03
UBR1YGR184C POL3P15436 1097 aa2.34□□□□□ -2.03
UBR1YGR184C DBP2P24783 546 aaKnown RBP2.34□□□□□ -2.03
UBR1YGR184C ERG3P32353 365 aa2.34□□□□□ -2.03
UBR1YGR184C NIP100P33420 868 aa2.34□□□□□ -2.03
UBR1YGR184C CDS1P38221 457 aa2.34□□□□□ -2.03
UBR1YGR184C VID28P40547 921 aa2.34□□□□□ -2.03
UBR1YGR184C NOP15P53927 220 aaPredicted RBP2.34□□□□□ -2.03
UBR1YGR184C CHD1P32657 1468 aa2.34□□□□□ -2.03
UBR1YGR184C BI4P03879 638 aa2.34□□□□□ -2.03
UBR1YGR184C RRP43P25359 394 aaPredicted RBP2.34□□□□□ -2.03
UBR1YGR184C YBR259WP38338 688 aa2.34□□□□□ -2.03
UBR1YGR184C OSH7P38755 437 aa2.34□□□□□ -2.03
UBR1YGR184C IST3P40565 148 aaPredicted RBP2.34□□□□□ -2.03
UBR1YGR184C ASE1P50275 885 aa2.34□□□□□ -2.03
UBR1YGR184C PSP1P50896 841 aaKnown RBP2.34□□□□□ -2.03
UBR1YGR184C SOK2P53438 785 aaPredicted RBP2.34□□□□□ -2.03
UBR1YGR184C CBK1P53894 756 aa2.34□□□□□ -2.03
UBR1YGR184C ATG21Q02887 496 aa2.34□□□□□ -2.03
UBR1YGR184C AIM41Q12032 185 aa2.34□□□□□ -2.03
UBR1YGR184C HOM3P10869 527 aa2.34□□□□□ -2.04
UBR1YGR184C PCK1P10963 549 aa2.34□□□□□ -2.04
UBR1YGR184C SAN1P22470 610 aa2.34□□□□□ -2.04
UBR1YGR184C CDC15P27636 974 aa2.34□□□□□ -2.04
UBR1YGR184C PGM1P33401 570 aaKnown RBP2.34□□□□□ -2.04
UBR1YGR184C SAP190P36123 1033 aa2.34□□□□□ -2.04
UBR1YGR184C AKL1P38080 1108 aaKnown RBP2.34□□□□□ -2.04
UBR1YGR184C FLR1P38124 548 aa2.34□□□□□ -2.04
UBR1YGR184C RTS1P38903 757 aa2.34□□□□□ -2.04
UBR1YGR184C CAB2P40506 365 aa2.34□□□□□ -2.04
UBR1YGR184C YJL181WP46987 611 aa2.34□□□□□ -2.04
UBR1YGR184C YPL108WQ02872 168 aaPredicted RBP2.34□□□□□ -2.04
UBR1YGR184C VPS64Q03944 604 aa2.34□□□□□ -2.04
UBR1YGR184C ERG27Q12452 347 aaKnown RBP2.34□□□□□ -2.04
UBR1YGR184C NBL1Q3E7Y6 73 aa2.34□□□□□ -2.04
UBR1YGR184C NOT3P06102 836 aaKnown RBP2.34□□□□□ -2.04
UBR1YGR184C VPS34P22543 875 aa2.34□□□□□ -2.04
UBR1YGR184C PIM1P36775 1133 aa2.34□□□□□ -2.04
UBR1YGR184C YBR225WP38321 900 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms