RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W ATG33Q06485 197 aa4.37□□□□□ -1.71
PTI1YGR156W MIH1P23748 554 aa4.36□□□□□ -1.71
PTI1YGR156W PER1P25625 357 aa4.36□□□□□ -1.71
PTI1YGR156W YHR112CP38716 378 aa4.36□□□□□ -1.71
PTI1YGR156W PMC1P38929 1173 aaPredicted RBP4.36□□□□□ -1.71
PTI1YGR156W SNP1Q00916 300 aaPredicted RBP4.36□□□□□ -1.71
PTI1YGR156W YOR378WQ08902 515 aa4.36□□□□□ -1.71
PTI1YGR156W CLF1Q12309 687 aaPredicted RBP4.36□□□□□ -1.71
PTI1YGR156W ZRT2Q12436 422 aa4.36□□□□□ -1.71
PTI1YGR156W LTE1P07866 1435 aa4.36□□□□□ -1.71
PTI1YGR156W RAD18P10862 487 aa4.35□□□□□ -1.71
PTI1YGR156W ADE2P21264 571 aaKnown RBP4.35□□□□□ -1.71
PTI1YGR156W HOG1P32485 435 aa4.35□□□□□ -1.71
PTI1YGR156W SEC6P32844 805 aa4.35□□□□□ -1.71
PTI1YGR156W SWE1P32944 819 aa4.35□□□□□ -1.71
PTI1YGR156W PHO11P35842 467 aa4.35□□□□□ -1.71
PTI1YGR156W PHO12P38693 467 aa4.35□□□□□ -1.71
PTI1YGR156W CKB2P38930 258 aa4.35□□□□□ -1.71
PTI1YGR156W DUG1P43616 481 aaKnown RBP4.35□□□□□ -1.71
PTI1YGR156W FHN1P53279 174 aa4.35□□□□□ -1.71
PTI1YGR156W ARG5,6Q01217 863 aa4.35□□□□□ -1.71
PTI1YGR156W SEG1Q04279 960 aa4.35□□□□□ -1.71
PTI1YGR156W FAP7Q12055 197 aaPredicted RBP4.35□□□□□ -1.71
PTI1YGR156W TMA7Q3E764 64 aaKnown RBP4.35□□□□□ -1.71
PTI1YGR156W SIN3P22579 1536 aa4.35□□□□□ -1.71
PTI1YGR156W ATP4P05626 244 aa4.34□□□□□ -1.71
PTI1YGR156W UBS1P38290 277 aa4.34□□□□□ -1.71
PTI1YGR156W YFL052WP43551 465 aa4.34□□□□□ -1.71
PTI1YGR156W MRK1P50873 501 aa4.34□□□□□ -1.71
PTI1YGR156W MCM21Q06675 368 aa4.34□□□□□ -1.71
PTI1YGR156W SLX4Q12098 748 aa4.34□□□□□ -1.71
PTI1YGR156W HMG1P12683 1054 aa4.33□□□□□ -1.72
PTI1YGR156W PLC1P32383 869 aa4.33□□□□□ -1.72
PTI1YGR156W GMH1P36125 273 aa4.33□□□□□ -1.72
PTI1YGR156W LYS9P38999 446 aa4.33□□□□□ -1.72
PTI1YGR156W GZF3P42944 551 aaKnown RBP4.33□□□□□ -1.72
PTI1YGR156W RIM13Q03792 727 aa4.33□□□□□ -1.72
PTI1YGR156W YTM1Q12024 460 aaPredicted RBP4.33□□□□□ -1.72
PTI1YGR156W GIN4Q12263 1142 aa4.33□□□□□ -1.72
PTI1YGR156W PIF1P07271 859 aa4.32□□□□□ -1.72
PTI1YGR156W RPA135P22138 1203 aaKnown RBP4.32□□□□□ -1.72
PTI1YGR156W PTP1P25044 335 aa4.32□□□□□ -1.72
PTI1YGR156W KCC4P25389 1037 aa4.32□□□□□ -1.72
PTI1YGR156W PWP2P25635 923 aaKnown RBP4.32□□□□□ -1.72
PTI1YGR156W VPS24P36095 224 aaKnown RBP4.32□□□□□ -1.72
PTI1YGR156W HRB1P38922 454 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
PTI1YGR156W OAF1P39720 1047 aaPredicted RBP4.32□□□□□ -1.72
PTI1YGR156W GPP2P40106 250 aaKnown RBP4.32□□□□□ -1.72
PTI1YGR156W CCT5P40413 562 aaKnown RBP4.32□□□□□ -1.72
PTI1YGR156W NIT2P47016 307 aa4.32□□□□□ -1.72
PTI1YGR156W REC102Q02721 264 aa4.32□□□□□ -1.72
PTI1YGR156W YDR338CQ05497 695 aa4.32□□□□□ -1.72
PTI1YGR156W GUD1Q07729 489 aa4.32□□□□□ -1.72
PTI1YGR156W MLH3Q12083 715 aa4.32□□□□□ -1.72
PTI1YGR156W MYO2P19524 1574 aaKnown RBP4.31□□□□□ -1.72
PTI1YGR156W FUB1P25659 250 aa4.31□□□□□ -1.72
PTI1YGR156W PRP19P32523 503 aaKnown RBP4.31□□□□□ -1.72
PTI1YGR156W MUP3P38734 546 aa4.31□□□□□ -1.72
PTI1YGR156W RPN10P38886 268 aaKnown RBP4.31□□□□□ -1.72
PTI1YGR156W MNN11P46985 422 aaKnown RBP4.31□□□□□ -1.72
PTI1YGR156W AIM14P53109 570 aa4.31□□□□□ -1.72
PTI1YGR156W NPY1P53164 384 aa4.31□□□□□ -1.72
PTI1YGR156W SND1Q04007 877 aa4.31□□□□□ -1.72
PTI1YGR156W NHX1Q04121 633 aa4.31□□□□□ -1.72
PTI1YGR156W TRE2Q08693 809 aa4.31□□□□□ -1.72
PTI1YGR156W ABF1P14164 731 aa4.3□□□□□ -1.72
PTI1YGR156W MIP6P38760 659 aaKnown RBP4.3□□□□□ -1.72
PTI1YGR156W PEA2P40091 420 aa4.3□□□□□ -1.72
PTI1YGR156W GAT1P43574 510 aa4.3□□□□□ -1.72
PTI1YGR156W BNA2P47125 453 aa4.3□□□□□ -1.72
PTI1YGR156W PEX14P53112 341 aa4.3□□□□□ -1.72
PTI1YGR156W YNL034WP53963 612 aa4.3□□□□□ -1.72
PTI1YGR156W YNL018CP53976 612 aa4.3□□□□□ -1.72
PTI1YGR156W DIA2Q08496 732 aaPredicted RBP4.3□□□□□ -1.72
PTI1YGR156W USV1Q12132 391 aa4.3□□□□□ -1.72
PTI1YGR156W HRP1Q99383 534 aaKnown RBP4.3□□□□□ -1.72
PTI1YGR156W TAF2P23255 1407 aa4.29□□□□□ -1.72
PTI1YGR156W RRP8P38961 392 aaKnown RBP4.29□□□□□ -1.72
PTI1YGR156W IES5P40060 125 aa4.29□□□□□ -1.72
PTI1YGR156W RET2P43621 546 aa4.29□□□□□ -1.72
PTI1YGR156W SPC98P53540 846 aa4.29□□□□□ -1.72
PTI1YGR156W ECM9Q02202 377 aa4.29□□□□□ -1.72
PTI1YGR156W OSW1Q08692 278 aa4.29□□□□□ -1.72
PTI1YGR156W APM4Q99186 491 aa4.29□□□□□ -1.72
PTI1YGR156W SKI3P17883 1432 aaKnown RBP4.29□□□□□ -1.72
PTI1YGR156W SST2P11972 698 aaKnown RBP4.28□□□□□ -1.72
PTI1YGR156W THR1P17423 357 aaKnown RBP4.28□□□□□ -1.72
PTI1YGR156W AEP2P22136 580 aa4.28□□□□□ -1.72
PTI1YGR156W ERG6P25087 383 aaKnown RBP4.28□□□□□ -1.72
PTI1YGR156W DID4P36108 232 aa4.28□□□□□ -1.72
PTI1YGR156W HXT6P39003 570 aaKnown RBP4.28□□□□□ -1.72
PTI1YGR156W HXT7P39004 570 aa4.28□□□□□ -1.72
PTI1YGR156W SUB1P54000 292 aaKnown RBP4.28□□□□□ -1.72
PTI1YGR156W ERG11P10614 530 aa4.27□□□□□ -1.73
PTI1YGR156W RNR1P21524 888 aaKnown RBP4.27□□□□□ -1.73
PTI1YGR156W PEX1P24004 1043 aa4.27□□□□□ -1.73
PTI1YGR156W HEM12P32347 362 aaPredicted RBP4.27□□□□□ -1.73
PTI1YGR156W TFC4P33339 1025 aa4.27□□□□□ -1.73
PTI1YGR156W FUI1P38196 639 aa4.27□□□□□ -1.73
PTI1YGR156W HSL7P38274 827 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms