RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C VPS1P21576 704 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C MNE1P24720 663 aa5.07□□□□□ -1.6
SEC9YGR009C DBP2P24783 546 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C EFT1P32324 842 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C SMI1P32566 505 aa5.07□□□□□ -1.6
SEC9YGR009C PRS1P32895 427 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C MSN4P33749 630 aa5.07□□□□□ -1.6
SEC9YGR009C GND1P38720 489 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C RSP5P39940 809 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C ACA1P39970 489 aa5.07□□□□□ -1.6
SEC9YGR009C TEL2P53038 688 aa5.07□□□□□ -1.6
SEC9YGR009C KAP114P53067 1004 aa5.07□□□□□ -1.6
SEC9YGR009C NPY1P53164 384 aa5.07□□□□□ -1.6
SEC9YGR009C KRE33P53914 1056 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C ASI1P54074 624 aa5.07□□□□□ -1.6
SEC9YGR009C NAN1Q02931 896 aaKnown RBP5.07□□□□□ -1.6
SEC9YGR009C DML1Q03652 475 aa5.07□□□□□ -1.6
SEC9YGR009C SHE9Q04172 456 aa5.07□□□□□ -1.6
SEC9YGR009C MGR3Q04472 501 aa5.07□□□□□ -1.6
SEC9YGR009C DCS1Q06151 350 aa5.07□□□□□ -1.6
SEC9YGR009C ENV9Q08651 330 aa5.07□□□□□ -1.6
SEC9YGR009C FLC1Q08967 793 aa5.07□□□□□ -1.6
SEC9YGR009C CPA2P03965 1118 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C SUI3P09064 285 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C MSS116P15424 664 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C RPI1P23250 407 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C GRR1P24814 1151 aa5.06□□□□□ -1.6
SEC9YGR009C GDH2P33327 1092 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C NIC96P34077 839 aa5.06□□□□□ -1.6
SEC9YGR009C KTR4P38131 464 aa5.06□□□□□ -1.6
SEC9YGR009C RFC3P38629 340 aa5.06□□□□□ -1.6
SEC9YGR009C YHL012WP38709 493 aa5.06□□□□□ -1.6
SEC9YGR009C MPT5P39016 859 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SEC9YGR009C OSW5P40219 148 aa5.06□□□□□ -1.6
SEC9YGR009C YJL068CP40363 299 aa5.06□□□□□ -1.6
SEC9YGR009C YIL092WP40497 633 aa5.06□□□□□ -1.6
SEC9YGR009C YGL242CP53066 181 aa5.06□□□□□ -1.6
SEC9YGR009C GOR1P53839 350 aa5.06□□□□□ -1.6
SEC9YGR009C ESBP6P53918 673 aa5.06□□□□□ -1.6
SEC9YGR009C APP1P53933 587 aa5.06□□□□□ -1.6
SEC9YGR009C SAM50P53969 484 aa5.06□□□□□ -1.6
SEC9YGR009C TIM50Q02776 476 aa5.06□□□□□ -1.6
SEC9YGR009C IRC4Q03036 179 aa5.06□□□□□ -1.6
SEC9YGR009C YMR102CQ03177 834 aa5.06□□□□□ -1.6
SEC9YGR009C ABZ2Q03266 374 aa5.06□□□□□ -1.6
SEC9YGR009C YPD1Q07688 167 aa5.06□□□□□ -1.6
SEC9YGR009C VHS3Q08438 674 aa5.06□□□□□ -1.6
SEC9YGR009C SKS1Q12505 502 aa5.06□□□□□ -1.6
SEC9YGR009C SPA2P23201 1466 aaKnown RBP5.06□□□□□ -1.6
SEC9YGR009C RPP2BP02400 110 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C MET3P08536 511 aa5.05□□□□□ -1.6
SEC9YGR009C ADH4P10127 382 aa5.05□□□□□ -1.6
SEC9YGR009C POL3P15436 1097 aa5.05□□□□□ -1.6
SEC9YGR009C RER1P25560 188 aa5.05□□□□□ -1.6
SEC9YGR009C SEC66P33754 206 aa5.05□□□□□ -1.6
SEC9YGR009C PMT1P33775 817 aa5.05□□□□□ -1.6
SEC9YGR009C RMA1P36001 430 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C VMA22P38784 181 aa5.05□□□□□ -1.6
SEC9YGR009C FLC2P39719 783 aa5.05□□□□□ -1.6
SEC9YGR009C THO1P40040 218 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C NOP9P47077 666 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C PBP1P53297 722 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C MNT4P53745 580 aa5.05□□□□□ -1.6
SEC9YGR009C BSC5P53755 489 aa5.05□□□□□ -1.6
SEC9YGR009C CWC24P53769 259 aa5.05□□□□□ -1.6
SEC9YGR009C RMI1Q02685 241 aa5.05□□□□□ -1.6
SEC9YGR009C UME1Q03010 460 aa5.05□□□□□ -1.6
SEC9YGR009C CMS1Q07897 291 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C THI73Q07904 523 aa5.05□□□□□ -1.6
SEC9YGR009C RTT10Q08924 1013 aa5.05□□□□□ -1.6
SEC9YGR009C RBD2Q12270 262 aa5.05□□□□□ -1.6
SEC9YGR009C PAR32Q12515 295 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C PGA3Q12746 312 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C YKL068W-AQ3E826 78 aa5.05□□□□□ -1.6
SEC9YGR009C TUS1Q06412 1307 aa5.05□□□□□ -1.6
SEC9YGR009C PRB1P09232 635 aa5.05□□□□□ -1.6
SEC9YGR009C KGD2P19262 463 aaPredicted RBP5.05□□□□□ -1.6
SEC9YGR009C YME1P32795 747 aa5.05□□□□□ -1.6
SEC9YGR009C GYP6P32806 458 aa5.05□□□□□ -1.6
SEC9YGR009C BEM3P32873 1128 aa5.05□□□□□ -1.6
SEC9YGR009C RPT5P33297 434 aaKnown RBP5.05□□□□□ -1.6
SEC9YGR009C MTH1P35198 433 aa5.05□□□□□ -1.6
SEC9YGR009C LAS1P36146 502 aaPredicted RBP5.05□□□□□ -1.6
SEC9YGR009C SEA4P38164 1038 aa5.05□□□□□ -1.6
SEC9YGR009C NTC20P38302 140 aaPredicted RBP5.05□□□□□ -1.6
SEC9YGR009C SOH1P38633 127 aa5.05□□□□□ -1.6
SEC9YGR009C YHI9P38765 294 aa5.05□□□□□ -1.6
SEC9YGR009C RCY1P39531 840 aa5.05□□□□□ -1.6
SEC9YGR009C CIR1P42940 261 aa5.05□□□□□ -1.6
SEC9YGR009C COX16P47081 118 aa5.05□□□□□ -1.6
SEC9YGR009C STR2P47164 639 aa5.05□□□□□ -1.6
SEC9YGR009C BPL1P48445 690 aaPredicted RBP5.05□□□□□ -1.6
SEC9YGR009C YGL117WP53133 265 aa5.05□□□□□ -1.6
SEC9YGR009C LCL3P53153 274 aa5.05□□□□□ -1.6
SEC9YGR009C TBF1Q02457 562 aa5.05□□□□□ -1.6
SEC9YGR009C ECM23Q02710 187 aa5.05□□□□□ -1.6
SEC9YGR009C KAP120Q02932 1032 aa5.05□□□□□ -1.6
SEC9YGR009C TFB2Q02939 513 aa5.05□□□□□ -1.6
SEC9YGR009C UGO1Q03327 502 aa5.05□□□□□ -1.6
SEC9YGR009C JIP4Q03361 876 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms