RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W VHS3Q08438 674 aa3.04□□□□□ -1.92
SNX41YDR425W CHS5Q12114 671 aaKnown RBP3.04□□□□□ -1.92
SNX41YDR425W ADR1P07248 1323 aa3.04□□□□□ -1.92
SNX41YDR425W TAF2P23255 1407 aa3.04□□□□□ -1.92
SNX41YDR425W ERG20P08524 352 aaKnown RBP3.03□□□□□ -1.92
SNX41YDR425W FRS1P15624 595 aaKnown RBP3.03□□□□□ -1.92
SNX41YDR425W IME1P21190 360 aa3.03□□□□□ -1.92
SNX41YDR425W IMG2P25642 146 aaPredicted RBP3.03□□□□□ -1.92
SNX41YDR425W MSS1P32559 526 aaPredicted RBP3.03□□□□□ -1.92
SNX41YDR425W EMP70P32802 667 aa3.03□□□□□ -1.92
SNX41YDR425W YKU70P32807 602 aa3.03□□□□□ -1.92
SNX41YDR425W DOS2P54858 310 aa3.03□□□□□ -1.92
SNX41YDR425W YLR407WQ06070 228 aa3.03□□□□□ -1.92
SNX41YDR425W USV1Q12132 391 aa3.03□□□□□ -1.92
SNX41YDR425W NDJ1Q12366 352 aa3.03□□□□□ -1.92
SNX41YDR425W ADY2P25613 283 aa3.03□□□□□ -1.93
SNX41YDR425W FEN2P25621 512 aaKnown RBP3.03□□□□□ -1.93
SNX41YDR425W FUB1P25659 250 aa3.03□□□□□ -1.93
SNX41YDR425W CUE2P36075 443 aaKnown RBP3.03□□□□□ -1.93
SNX41YDR425W CTP1P38152 299 aa3.03□□□□□ -1.93
SNX41YDR425W YJR142WP47173 342 aa3.03□□□□□ -1.93
SNX41YDR425W RCR2Q03446 210 aaKnown RBP3.03□□□□□ -1.93
SNX41YDR425W THI73Q07904 523 aa3.03□□□□□ -1.93
SNX41YDR425W HSL1P34244 1518 aa3.02□□□□□ -1.93
SNX41YDR425W SPT6P23615 1451 aaKnown RBP3.02□□□□□ -1.93
SNX41YDR425W RPN13O13563 156 aa3.02□□□□□ -1.93
SNX41YDR425W KIN82P25341 720 aa3.02□□□□□ -1.93
SNX41YDR425W GMH1P36125 273 aa3.02□□□□□ -1.93
SNX41YDR425W YKR075CP36155 307 aa3.02□□□□□ -1.93
SNX41YDR425W KHA1P40309 873 aa3.02□□□□□ -1.93
SNX41YDR425W GZF3P42944 551 aaKnown RBP3.02□□□□□ -1.93
SNX41YDR425W MPS3P47069 682 aa3.02□□□□□ -1.93
SNX41YDR425W PMT3P47190 753 aa3.02□□□□□ -1.93
SNX41YDR425W RFX1P48743 811 aa3.02□□□□□ -1.93
SNX41YDR425W YGR151CP53287 111 aa3.02□□□□□ -1.93
SNX41YDR425W YNR029CP53729 429 aaKnown RBP3.02□□□□□ -1.93
SNX41YDR425W MTQ2Q03920 221 aaPredicted RBP3.02□□□□□ -1.93
SNX41YDR425W YPS7Q06325 596 aa3.02□□□□□ -1.93
SNX41YDR425W YFT2Q06676 274 aa3.02□□□□□ -1.93
SNX41YDR425W BMS1Q08965 1183 aaKnown RBP3.02□□□□□ -1.93
SNX41YDR425W APM4Q99186 491 aa3.02□□□□□ -1.93
SNX41YDR425W BNR1P40450 1375 aa3.01□□□□□ -1.93
SNX41YDR425W TUB1P09733 447 aaKnown RBP3.01□□□□□ -1.93
SNX41YDR425W ABF1P14164 731 aa3.01□□□□□ -1.93
SNX41YDR425W FLO10P36170 1169 aa3.01□□□□□ -1.93
SNX41YDR425W TDA3P38758 523 aa3.01□□□□□ -1.93
SNX41YDR425W HXT6P39003 570 aaKnown RBP3.01□□□□□ -1.93
SNX41YDR425W HXT7P39004 570 aa3.01□□□□□ -1.93
SNX41YDR425W YEL020CP39994 560 aa3.01□□□□□ -1.93
SNX41YDR425W GPG1P53130 126 aa3.01□□□□□ -1.93
SNX41YDR425W APM1Q00776 475 aaPredicted RBP3.01□□□□□ -1.93
SNX41YDR425W ECM9Q02202 377 aa3.01□□□□□ -1.93
SNX41YDR425W YMR210WQ03649 449 aa3.01□□□□□ -1.93
SNX41YDR425W VBA4Q04602 768 aaKnown RBP3.01□□□□□ -1.93
SNX41YDR425W ARO10Q06408 635 aa3.01□□□□□ -1.93
SNX41YDR425W HFI1Q12060 488 aa3.01□□□□□ -1.93
SNX41YDR425W ECM5Q03214 1411 aa3.01□□□□□ -1.93
SNX41YDR425W CLC1P17891 233 aa3.01□□□□□ -1.93
SNX41YDR425W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
SNX41YDR425W PRP19P32523 503 aaKnown RBP3.01□□□□□ -1.93
SNX41YDR425W IME2P32581 645 aa3.01□□□□□ -1.93
SNX41YDR425W TYS1P36421 394 aaKnown RBP3.01□□□□□ -1.93
SNX41YDR425W RIX1P38883 763 aaPredicted RBP3.01□□□□□ -1.93
SNX41YDR425W IES1P43579 692 aa3.01□□□□□ -1.93
SNX41YDR425W HLJ1P48353 224 aa3.01□□□□□ -1.93
SNX41YDR425W MRK1P50873 501 aa3.01□□□□□ -1.93
SNX41YDR425W UME1Q03010 460 aa3.01□□□□□ -1.93
SNX41YDR425W YML122CQ03207 126 aa3.01□□□□□ -1.93
SNX41YDR425W STP4Q07351 490 aa3.01□□□□□ -1.93
SNX41YDR425W YDL086WQ07505 273 aa3.01□□□□□ -1.93
SNX41YDR425W PRP22P24384 1145 aaKnown RBP3□□□□□ -1.93
SNX41YDR425W NTH1P32356 751 aa3□□□□□ -1.93
SNX41YDR425W OAF3P36023 863 aa3□□□□□ -1.93
SNX41YDR425W COS111P38308 924 aa3□□□□□ -1.93
SNX41YDR425W MUP3P38734 546 aa3□□□□□ -1.93
SNX41YDR425W YHR097CP38809 366 aaKnown RBP3□□□□□ -1.93
SNX41YDR425W PAC2P39937 518 aa3□□□□□ -1.93
SNX41YDR425W YIL077CP40508 320 aa3□□□□□ -1.93
SNX41YDR425W BUD8P41698 603 aa3□□□□□ -1.93
SNX41YDR425W YGR153WP48238 217 aa3□□□□□ -1.93
SNX41YDR425W NOP15P53927 220 aaPredicted RBP3□□□□□ -1.93
SNX41YDR425W COQ11Q05892 277 aa3□□□□□ -1.93
SNX41YDR425W YSH1Q06224 779 aaPredicted RBP3□□□□□ -1.93
SNX41YDR425W IZH3Q07959 543 aa3□□□□□ -1.93
SNX41YDR425W YTM1Q12024 460 aaPredicted RBP3□□□□□ -1.93
SNX41YDR425W RPS21BQ3E754 87 aaKnown RBP3□□□□□ -1.93
SNX41YDR425W STU1P38198 1513 aa3□□□□□ -1.93
SNX41YDR425W MON2P48563 1636 aaPredicted RBP2.99□□□□□ -1.93
SNX41YDR425W PPZ2P33329 710 aa2.99□□□□□ -1.93
SNX41YDR425W KSP1P38691 1029 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W OAF1P39720 1047 aaPredicted RBP2.99□□□□□ -1.93
SNX41YDR425W MIT1P40002 666 aa2.99□□□□□ -1.93
SNX41YDR425W PXA1P41909 870 aa2.99□□□□□ -1.93
SNX41YDR425W YFR016CP43597 1233 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W MNN11P46985 422 aaKnown RBP2.99□□□□□ -1.93
SNX41YDR425W BFA1P47113 574 aa2.99□□□□□ -1.93
SNX41YDR425W SNF12P53628 566 aa2.99□□□□□ -1.93
SNX41YDR425W NSE5Q03718 556 aa2.99□□□□□ -1.93
SNX41YDR425W PPN1Q04119 674 aa2.99□□□□□ -1.93
SNX41YDR425W YGR161W-CQ3E744 92 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms