RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W GSF2Q04697 403 aaKnown RBP5.66□□□□□ -1.5
SPT3YDR392W YLR456WQ06199 204 aa5.66□□□□□ -1.5
SPT3YDR392W RSC58Q07979 502 aa5.66□□□□□ -1.5
SPT3YDR392W YOR352WQ08816 343 aa5.66□□□□□ -1.5
SPT3YDR392W OXR1Q08952 273 aa5.66□□□□□ -1.5
SPT3YDR392W PCD1Q12524 340 aa5.66□□□□□ -1.5
SPT3YDR392W SPS1P08458 490 aa5.65□□□□□ -1.5
SPT3YDR392W MAS1P10507 462 aa5.65□□□□□ -1.5
SPT3YDR392W PDE1P22434 369 aa5.65□□□□□ -1.5
SPT3YDR392W PGS1P25578 521 aa5.65□□□□□ -1.5
SPT3YDR392W PCM1P38628 557 aaKnown RBP5.65□□□□□ -1.5
SPT3YDR392W YHL050CP38721 697 aa5.65□□□□□ -1.5
SPT3YDR392W YHR219WP38900 624 aa5.65□□□□□ -1.5
SPT3YDR392W GAL4P04386 881 aa5.64□□□□□ -1.51
SPT3YDR392W MRP7P12687 371 aa5.64□□□□□ -1.51
SPT3YDR392W RME1P32338 300 aaKnown RBP5.64□□□□□ -1.51
SPT3YDR392W UGA4P32837 571 aa5.64□□□□□ -1.51
SPT3YDR392W DUG2P38149 878 aa5.64□□□□□ -1.51
SPT3YDR392W PPX1P38698 397 aa5.64□□□□□ -1.51
SPT3YDR392W SAD1P43589 448 aa5.64□□□□□ -1.51
SPT3YDR392W NRM1P53718 249 aa5.64□□□□□ -1.51
SPT3YDR392W YPL272CQ08984 517 aa5.64□□□□□ -1.51
SPT3YDR392W ATP1P07251 545 aaKnown RBP5.63□□□□□ -1.51
SPT3YDR392W RPL4AP10664 362 aaKnown RBP5.63□□□□□ -1.51
SPT3YDR392W GAC1P28006 793 aa5.63□□□□□ -1.51
SPT3YDR392W CSE2P33308 149 aa5.63□□□□□ -1.51
SPT3YDR392W UBS1P38290 277 aa5.63□□□□□ -1.51
SPT3YDR392W YPS6P40583 537 aa5.63□□□□□ -1.51
SPT3YDR392W RPL4BP49626 362 aaKnown RBP5.63□□□□□ -1.51
SPT3YDR392W HNT2P49775 206 aa5.63□□□□□ -1.51
SPT3YDR392W YGL140CP53120 1219 aa5.63□□□□□ -1.51
SPT3YDR392W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
SPT3YDR392W RSM10Q03201 203 aa5.63□□□□□ -1.51
SPT3YDR392W ADI1Q03677 179 aa5.63□□□□□ -1.51
SPT3YDR392W HEL2Q05580 639 aaKnown RBP5.63□□□□□ -1.51
SPT3YDR392W SNF5P18480 905 aa5.62□□□□□ -1.51
SPT3YDR392W UBC1P21734 215 aaKnown RBP5.62□□□□□ -1.51
SPT3YDR392W KIP1P28742 1111 aa5.62□□□□□ -1.51
SPT3YDR392W CCZ1P38273 704 aa5.62□□□□□ -1.51
SPT3YDR392W YAP1801P38856 637 aa5.62□□□□□ -1.51
SPT3YDR392W ENT3P47160 408 aa5.62□□□□□ -1.51
SPT3YDR392W PTA1Q01329 785 aaPredicted RBP5.62□□□□□ -1.51
SPT3YDR392W CLU1Q03690 1277 aaKnown RBP5.62□□□□□ -1.51
SPT3YDR392W EST2Q06163 884 aa5.62□□□□□ -1.51
SPT3YDR392W PLP2Q12017 286 aa5.62□□□□□ -1.51
SPT3YDR392W SPE3Q12074 293 aaKnown RBP5.62□□□□□ -1.51
SPT3YDR392W YRA1Q12159 226 aaKnown RBP5.62□□□□□ -1.51
SPT3YDR392W ASG1P40467 964 aa5.61□□□□□ -1.51
SPT3YDR392W DAK2P43550 591 aa5.61□□□□□ -1.51
SPT3YDR392W CCM1P48237 864 aaPredicted RBP5.61□□□□□ -1.51
SPT3YDR392W MDR1P53258 950 aa5.61□□□□□ -1.51
SPT3YDR392W DAL82P21705 255 aa5.6□□□□□ -1.51
SPT3YDR392W STE11P23561 717 aa5.6□□□□□ -1.51
SPT3YDR392W IMP2'P32351 346 aa5.6□□□□□ -1.51
SPT3YDR392W BAT1P38891 393 aaKnown RBP5.6□□□□□ -1.51
SPT3YDR392W YPL109CQ02981 657 aa5.6□□□□□ -1.51
SPT3YDR392W FMP45Q07651 309 aa5.6□□□□□ -1.51
SPT3YDR392W PKH2Q12236 1081 aaKnown RBP5.6□□□□□ -1.51
SPT3YDR392W VPH1P32563 840 aaKnown RBP5.59□□□□□ -1.51
SPT3YDR392W ABZ1P37254 787 aaPredicted RBP5.59□□□□□ -1.51
SPT3YDR392W GRX7P38068 203 aa5.59□□□□□ -1.51
SPT3YDR392W BAP2P38084 609 aa5.59□□□□□ -1.51
SPT3YDR392W LAM1P38851 1228 aa5.59□□□□□ -1.51
SPT3YDR392W PES4P39684 611 aa5.59□□□□□ -1.51
SPT3YDR392W ERV46P39727 415 aa5.59□□□□□ -1.51
SPT3YDR392W HMF1P40037 129 aaKnown RBP5.59□□□□□ -1.51
SPT3YDR392W SEC26P41810 973 aaKnown RBP5.59□□□□□ -1.51
SPT3YDR392W TNA1P53322 534 aa5.59□□□□□ -1.51
SPT3YDR392W NUP116Q02630 1113 aa5.59□□□□□ -1.51
SPT3YDR392W RSB1Q08417 382 aa5.59□□□□□ -1.51
SPT3YDR392W HIS4P00815 799 aaKnown RBP5.58□□□□□ -1.52
SPT3YDR392W TAF13P11747 167 aa5.58□□□□□ -1.52
SPT3YDR392W SEC23P15303 768 aaKnown RBP5.58□□□□□ -1.52
SPT3YDR392W MET4P32389 672 aa5.58□□□□□ -1.52
SPT3YDR392W SHM2P37291 469 aaKnown RBP5.58□□□□□ -1.52
SPT3YDR392W VID28P40547 921 aa5.58□□□□□ -1.52
SPT3YDR392W FLC1Q08967 793 aa5.58□□□□□ -1.52
SPT3YDR392W PTC5Q12511 572 aa5.58□□□□□ -1.52
SPT3YDR392W HEM13P11353 328 aaKnown RBP5.57□□□□□ -1.52
SPT3YDR392W BRF1P29056 596 aa5.57□□□□□ -1.52
SPT3YDR392W TVP38P36164 337 aa5.57□□□□□ -1.52
SPT3YDR392W PIM1P36775 1133 aa5.57□□□□□ -1.52
SPT3YDR392W HMT1P38074 348 aa5.57□□□□□ -1.52
SPT3YDR392W PIK1P39104 1066 aa5.57□□□□□ -1.52
SPT3YDR392W MEF2P39677 819 aa5.57□□□□□ -1.52
SPT3YDR392W SLG1P54867 378 aa5.57□□□□□ -1.52
SPT3YDR392W YDR132CQ03900 495 aa5.57□□□□□ -1.52
SPT3YDR392W RCL1Q08096 367 aaPredicted RBP5.57□□□□□ -1.52
SPT3YDR392W ADE2P21264 571 aaKnown RBP5.56□□□□□ -1.52
SPT3YDR392W TAT2P38967 592 aa5.56□□□□□ -1.52
SPT3YDR392W MPT5P39016 859 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SPT3YDR392W GDH3P39708 457 aa5.56□□□□□ -1.52
SPT3YDR392W RPN3P40016 523 aaKnown RBP5.56□□□□□ -1.52
SPT3YDR392W SPT20P50875 604 aa5.56□□□□□ -1.52
SPT3YDR392W PSP1P50896 841 aaKnown RBP5.56□□□□□ -1.52
SPT3YDR392W YNL092WP53934 400 aa5.56□□□□□ -1.52
SPT3YDR392W ARP4P80428 489 aa5.56□□□□□ -1.52
SPT3YDR392W GCN5Q03330 439 aa5.56□□□□□ -1.52
SPT3YDR392W SDH5Q08230 162 aa5.56□□□□□ -1.52
SPT3YDR392W WSC4P38739 605 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms