RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	GUK1	P15454	187 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	AAC3	P18238	307 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	MCM3	P24279	971 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	YCL049C	P25577	312 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	SEG2	P34250	1132 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	POL12	P38121	705 aa	Predicted RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	IFA38	P38286	347 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	STT3	P39007	718 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	ZRG8	P40021	1076 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	RAD26	P40352	1085 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	DPH1	P40487	425 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	SRB7	P47822	140 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	MTR3	P48240	250 aa	Predicted RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	MNT2	P53059	558 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	MRPL13	Q02204	264 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	SIZ1	Q04195	904 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	TFC6	Q06339	672 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TFB1	YDR311W	DBP10	Q12389	995 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	SNU66	Q12420	587 aa	Predicted RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	ENT1	Q12518	454 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	MTF2	P10849	440 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
TFB1	YDR311W	SLC1	P33333	303 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	YHR078W	P38799	552 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	YEL068C	P39977	110 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	YNR071C	P53757	342 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	ORC4	P54791	529 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	SSY1	Q03770	852 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	MUS81	Q04149	632 aa	Predicted RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	LPX1	Q12405	387 aa	Known RBP	3.21	□□□□□ -1.9
TFB1	YDR311W	DFG16	Q99234	619 aa		3.21	□□□□□ -1.9
TFB1	YDR311W	PHO5	P00635	467 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	KIN2	P13186	1147 aa	Known RBP	3.2	□□□□□ -1.9
TFB1	YDR311W	POL3	P15436	1097 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	RNQ1	P25367	405 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	XRS2	P33301	854 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	SET3	P36124	751 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	APN2	P38207	520 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	YBR138C	P38277	524 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	PPE1	P38796	400 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	CTF8	P38877	133 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	KAP123	P40069	1113 aa	Known RBP	3.2	□□□□□ -1.9
TFB1	YDR311W	SDP1	P40479	209 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	VHR1	P40522	640 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	PFA3	P42836	336 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	ECL1	P48235	211 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	EXG2	P52911	562 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	RSM24	Q03976	319 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	VID22	Q05934	901 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	SGD1	Q06132	899 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	IMH1	Q06704	911 aa	Known RBP	3.2	□□□□□ -1.9
TFB1	YDR311W	VHS3	Q08438	674 aa		3.2	□□□□□ -1.9
TFB1	YDR311W	MET8	P15807	274 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	UBC1	P21734	215 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	CLB4	P24871	460 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	SWI4	P25302	1093 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	YER010C	P40011	234 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	YNL195C	P40168	261 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	PSF2	P40359	213 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	BUD8	P41698	603 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	YAP1802	P53309	568 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	SPE1	P08432	466 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	PRP4	P20053	465 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	ADE2	P21264	571 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	PAH1	P32567	862 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	RMA1	P36001	430 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	YHR033W	P38690	423 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	MSS4	P38994	779 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	PZF1	P39933	429 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	NOP16	P40007	231 aa	Known RBP	3.19	□□□□□ -1.9
TFB1	YDR311W	GID8	P40208	455 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	MND2	P40577	368 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	ACS1	Q01574	713 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	ARA2	Q04212	335 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	VPS36	Q06696	566 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	ATG11	Q12527	1178 aa		3.19	□□□□□ -1.9
TFB1	YDR311W	LEU2	P04173	364 aa	Predicted RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	ADE3	P07245	946 aa	Known RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	FRS1	P15624	595 aa	Known RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	SIR1	P21691	654 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	MTC7	P32633	139 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	TSA1	P34760	196 aa	Known RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	BCD1	P38772	366 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	UBP5	P39944	805 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	VTC2	P43585	828 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	GCV2	P49095	1034 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	PRP31	P49704	494 aa	Predicted RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	TAF4	P50105	388 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	PSP2	P50109	593 aa	Known RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	CBK1	P53894	756 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	TDA9	Q04545	1251 aa		3.18	□□□□□ -1.9
TFB1	YDR311W	VIP1	Q06685	1146 aa	Known RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	IWR1	Q07532	353 aa	Predicted RBP	3.18	□□□□□ -1.9
TFB1	YDR311W	CYC1	P00044	109 aa	Predicted RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	HOM3	P10869	527 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	PYC1	P11154	1178 aa	Known RBP	3.17	□□□□□ -1.9
TFB1	YDR311W	ARG1	P22768	420 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	STE14	P32584	239 aa		3.17	□□□□□ -1.9
TFB1	YDR311W	YPT7	P32939	208 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 1116.2 ms