RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C YMR210WQ03649 449 aa5.11□□□□□ -1.59
TRM1YDR120C HMO1Q03973 246 aaKnown RBP5.11□□□□□ -1.59
TRM1YDR120C TGL5Q12043 749 aa5.11□□□□□ -1.59
TRM1YDR120C STH1P32597 1359 aa5.11□□□□□ -1.59
TRM1YDR120C PYC1P11154 1178 aaKnown RBP5.1□□□□□ -1.59
TRM1YDR120C KAR1P11927 433 aa5.1□□□□□ -1.59
TRM1YDR120C COX11P19516 300 aaKnown RBP5.1□□□□□ -1.59
TRM1YDR120C IMG2P25642 146 aaPredicted RBP5.1□□□□□ -1.59
TRM1YDR120C DCG1P32460 244 aa5.1□□□□□ -1.59
TRM1YDR120C YKU70P32807 602 aa5.1□□□□□ -1.59
TRM1YDR120C PEA2P40091 420 aa5.1□□□□□ -1.59
TRM1YDR120C SLD3P53135 668 aa5.1□□□□□ -1.59
TRM1YDR120C SPC105P53148 917 aa5.1□□□□□ -1.59
TRM1YDR120C REC102Q02721 264 aa5.1□□□□□ -1.59
TRM1YDR120C ISA1Q07821 250 aaPredicted RBP5.1□□□□□ -1.59
TRM1YDR120C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
TRM1YDR120C APT2P36973 181 aa5.09□□□□□ -1.59
TRM1YDR120C EMP65P40085 556 aa5.09□□□□□ -1.59
TRM1YDR120C TPM2P40414 161 aa5.09□□□□□ -1.59
TRM1YDR120C RNR4P49723 345 aaKnown RBP5.09□□□□□ -1.59
TRM1YDR120C TEX1P53851 422 aaKnown RBP5.09□□□□□ -1.59
TRM1YDR120C PHM6Q05637 104 aa5.09□□□□□ -1.59
TRM1YDR120C MPD2Q99316 277 aa5.09□□□□□ -1.59
TRM1YDR120C YOR093CQ12275 1648 aa5.09□□□□□ -1.6
TRM1YDR120C GLN4P13188 809 aaKnown RBP5.09□□□□□ -1.6
TRM1YDR120C FKH2P41813 862 aa5.09□□□□□ -1.6
TRM1YDR120C CLU1Q03690 1277 aaKnown RBP5.09□□□□□ -1.6
TRM1YDR120C YPS7Q06325 596 aa5.09□□□□□ -1.6
TRM1YDR120C YOR378WQ08902 515 aa5.09□□□□□ -1.6
TRM1YDR120C TRM3Q07527 1436 aa5.08□□□□□ -1.6
TRM1YDR120C RPS17AP02407 136 aaKnown RBP5.08□□□□□ -1.6
TRM1YDR120C TRP4P07285 380 aaPredicted RBP5.08□□□□□ -1.6
TRM1YDR120C RPS17BP14127 136 aaKnown RBP5.08□□□□□ -1.6
TRM1YDR120C CDC26P14724 124 aa5.08□□□□□ -1.6
TRM1YDR120C PFK1P16861 987 aaKnown RBP5.08□□□□□ -1.6
TRM1YDR120C ATP12P22135 325 aa5.08□□□□□ -1.6
TRM1YDR120C SEC6P32844 805 aa5.08□□□□□ -1.6
TRM1YDR120C TRZ1P36159 838 aaPredicted RBP5.08□□□□□ -1.6
TRM1YDR120C VID28P40547 921 aa5.08□□□□□ -1.6
TRM1YDR120C IES1P43579 692 aa5.08□□□□□ -1.6
TRM1YDR120C GAD1Q04792 585 aa5.08□□□□□ -1.6
TRM1YDR120C PEX15Q08215 383 aa5.08□□□□□ -1.6
TRM1YDR120C VHS3Q08438 674 aa5.08□□□□□ -1.6
TRM1YDR120C DOP1Q03921 1698 aa5.07□□□□□ -1.6
TRM1YDR120C ATP4P05626 244 aa5.07□□□□□ -1.6
TRM1YDR120C PET127P32606 800 aa5.07□□□□□ -1.6
TRM1YDR120C MPT5P39016 859 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6 RIP-Chip
TRM1YDR120C BUL1P48524 976 aa5.07□□□□□ -1.6
TRM1YDR120C ECM38Q05902 660 aaPredicted RBP5.07□□□□□ -1.6
TRM1YDR120C PMA1P05030 918 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C SST2P11972 698 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C HCA4P20448 770 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C RNR1P21524 888 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C ERG6P25087 383 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C YPT7P32939 208 aa5.06□□□□□ -1.6
TRM1YDR120C YNL195CP40168 261 aa5.06□□□□□ -1.6
TRM1YDR120C RCR2Q03446 210 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C STP4Q07351 490 aa5.06□□□□□ -1.6
TRM1YDR120C ATG11Q12527 1178 aa5.06□□□□□ -1.6
TRM1YDR120C PDR10P51533 1564 aa5.06□□□□□ -1.6
TRM1YDR120C PDR12Q02785 1511 aa5.06□□□□□ -1.6
TRM1YDR120C FRS1P15624 595 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C IME1P21190 360 aa5.06□□□□□ -1.6
TRM1YDR120C HIR1P32479 840 aa5.06□□□□□ -1.6
TRM1YDR120C DAS1P47005 663 aa5.06□□□□□ -1.6
TRM1YDR120C NRD1P53617 575 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
TRM1YDR120C SGO1Q08490 590 aa5.06□□□□□ -1.6
TRM1YDR120C HRP1Q99383 534 aaKnown RBP5.06□□□□□ -1.6
TRM1YDR120C IQG1Q12280 1495 aa5.05□□□□□ -1.6
TRM1YDR120C LAT1P12695 482 aaKnown RBP5.05□□□□□ -1.6
TRM1YDR120C MF(ALPHA)2P32435 120 aa5.05□□□□□ -1.6
TRM1YDR120C DUN1P39009 513 aa5.05□□□□□ -1.6
TRM1YDR120C NOP9P47077 666 aaKnown RBP5.05□□□□□ -1.6
TRM1YDR120C AMA1P50082 593 aa5.05□□□□□ -1.6
TRM1YDR120C COX18P53239 316 aa5.05□□□□□ -1.6
TRM1YDR120C DLT1Q04216 342 aa5.05□□□□□ -1.6
TRM1YDR120C VPS36Q06696 566 aa5.05□□□□□ -1.6
TRM1YDR120C ACO1P19414 778 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
TRM1YDR120C HXT4P32467 576 aa5.04□□□□□ -1.6
TRM1YDR120C NIC96P34077 839 aa5.04□□□□□ -1.6
TRM1YDR120C YBR053CP38235 358 aa5.04□□□□□ -1.6
TRM1YDR120C LYS9P38999 446 aa5.04□□□□□ -1.6
TRM1YDR120C GET2P40056 285 aa5.04□□□□□ -1.6
TRM1YDR120C YIR042CP40586 236 aa5.04□□□□□ -1.6
TRM1YDR120C BAP3P41815 604 aa5.04□□□□□ -1.6
TRM1YDR120C MUP1P50276 574 aa5.04□□□□□ -1.6
TRM1YDR120C CTK1Q03957 528 aaKnown RBP5.04□□□□□ -1.6
TRM1YDR120C NGL1Q08213 363 aaKnown RBP5.04□□□□□ -1.6
TRM1YDR120C NUP157P40064 1391 aaKnown RBP5.04□□□□□ -1.6
TRM1YDR120C MET3P08536 511 aa5.03□□□□□ -1.6
TRM1YDR120C CAF20P12962 161 aaKnown RBP5.03□□□□□ -1.6
TRM1YDR120C CTS1P29029 562 aa5.03□□□□□ -1.6
TRM1YDR120C UBP5P39944 805 aa5.03□□□□□ -1.6
TRM1YDR120C ELO3P40319 345 aa5.03□□□□□ -1.6
TRM1YDR120C HOS4P40480 1083 aa5.03□□□□□ -1.6
TRM1YDR120C PHO23P50947 330 aa5.03□□□□□ -1.6
TRM1YDR120C MTL1P53214 551 aa5.03□□□□□ -1.6
TRM1YDR120C MET14Q02196 202 aa5.03□□□□□ -1.6
TRM1YDR120C NYV1Q12255 253 aa5.03□□□□□ -1.6
TRM1YDR120C ECM3Q99252 613 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms