RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W BIT61P47041 543 aa3.67□□□□□ -1.82
SHS1YDL225W RNR4P49723 345 aaKnown RBP3.67□□□□□ -1.82
SHS1YDL225W PEX8P53248 589 aa3.67□□□□□ -1.82
SHS1YDL225W YMR206WQ03695 313 aa3.67□□□□□ -1.82
SHS1YDL225W POM34Q12445 299 aa3.67□□□□□ -1.82
SHS1YDL225W HCA4P20448 770 aaKnown RBP3.66□□□□□ -1.82
SHS1YDL225W HEM12P32347 362 aaPredicted RBP3.66□□□□□ -1.82
SHS1YDL225W SFB3P38810 929 aa3.66□□□□□ -1.82
SHS1YDL225W BUD8P41698 603 aa3.66□□□□□ -1.82
SHS1YDL225W PAN2P53010 1115 aaPredicted RBP3.66□□□□□ -1.82
SHS1YDL225W CTF4Q01454 927 aa3.66□□□□□ -1.82
SHS1YDL225W SND1Q04007 877 aa3.66□□□□□ -1.82
SHS1YDL225W THI22Q06490 572 aa3.66□□□□□ -1.82
SHS1YDL225W YKL033W-AQ86ZR7 236 aa3.66□□□□□ -1.82
SHS1YDL225W KAR1P11927 433 aa3.65□□□□□ -1.82
SHS1YDL225W SEC15P22224 910 aa3.65□□□□□ -1.82
SHS1YDL225W DGR2P32330 852 aa3.65□□□□□ -1.82
SHS1YDL225W BCS1P32839 456 aa3.65□□□□□ -1.82
SHS1YDL225W HRB1P38922 454 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
SHS1YDL225W FMP52P40008 231 aa3.65□□□□□ -1.82
SHS1YDL225W EMP65P40085 556 aa3.65□□□□□ -1.82
SHS1YDL225W ECM38Q05902 660 aaPredicted RBP3.65□□□□□ -1.82
SHS1YDL225W ZRT2Q12436 422 aa3.65□□□□□ -1.82
SHS1YDL225W RPS9BP05755 195 aaKnown RBP3.65□□□□□ -1.83
SHS1YDL225W PRP22P24384 1145 aaKnown RBP3.65□□□□□ -1.83
SHS1YDL225W KIN82P25341 720 aa3.65□□□□□ -1.83
SHS1YDL225W MF(ALPHA)2P32435 120 aa3.65□□□□□ -1.83
SHS1YDL225W SEC6P32844 805 aa3.65□□□□□ -1.83
SHS1YDL225W TAF4P50105 388 aa3.65□□□□□ -1.83
SHS1YDL225W TGL2P54857 326 aa3.65□□□□□ -1.83
SHS1YDL225W NGL1Q08213 363 aaKnown RBP3.65□□□□□ -1.83
SHS1YDL225W SIR3P06701 978 aa3.64□□□□□ -1.83
SHS1YDL225W ACO1P19414 778 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SHS1YDL225W FEN2P25621 512 aaKnown RBP3.64□□□□□ -1.83
SHS1YDL225W SRP68P38687 599 aaKnown RBP3.64□□□□□ -1.83
SHS1YDL225W YIL077CP40508 320 aa3.64□□□□□ -1.83
SHS1YDL225W SLI1P53304 468 aa3.64□□□□□ -1.83
SHS1YDL225W MUK1Q02866 612 aa3.64□□□□□ -1.83
SHS1YDL225W PHM6Q05637 104 aa3.64□□□□□ -1.83
SHS1YDL225W TMA7Q3E764 64 aaKnown RBP3.64□□□□□ -1.83
SHS1YDL225W PRE4P30657 266 aa3.63□□□□□ -1.83
SHS1YDL225W HXT4P32467 576 aa3.63□□□□□ -1.83
SHS1YDL225W PHO11P35842 467 aa3.63□□□□□ -1.83
SHS1YDL225W COS111P38308 924 aa3.63□□□□□ -1.83
SHS1YDL225W PHO12P38693 467 aa3.63□□□□□ -1.83
SHS1YDL225W CHS7P38843 316 aa3.63□□□□□ -1.83
SHS1YDL225W PEA2P40091 420 aa3.63□□□□□ -1.83
SHS1YDL225W DAS1P47005 663 aa3.63□□□□□ -1.83
SHS1YDL225W YAP1802P53309 568 aa3.63□□□□□ -1.83
SHS1YDL225W RIA1P53893 1110 aa3.63□□□□□ -1.83
SHS1YDL225W YNL034WP53963 612 aa3.63□□□□□ -1.83
SHS1YDL225W YNL018CP53976 612 aa3.63□□□□□ -1.83
SHS1YDL225W TIM44Q01852 431 aa3.63□□□□□ -1.83
SHS1YDL225W NSE5Q03718 556 aa3.63□□□□□ -1.83
SHS1YDL225W PPN1Q04119 674 aa3.63□□□□□ -1.83
SHS1YDL225W YFT2Q06676 274 aa3.63□□□□□ -1.83
SHS1YDL225W PEX15Q08215 383 aa3.63□□□□□ -1.83
SHS1YDL225W CWC2Q12046 339 aaPredicted RBP3.63□□□□□ -1.83
SHS1YDL225W ACF2Q12168 779 aa3.63□□□□□ -1.83
SHS1YDL225W PRP28P23394 588 aa3.62□□□□□ -1.83
SHS1YDL225W YHR033WP38690 423 aa3.62□□□□□ -1.83
SHS1YDL225W YHL017WP38745 532 aa3.62□□□□□ -1.83
SHS1YDL225W PIG2P40187 538 aa3.62□□□□□ -1.83
SHS1YDL225W ENP2P48234 707 aaKnown RBP3.62□□□□□ -1.83
SHS1YDL225W RFX1P48743 811 aa3.62□□□□□ -1.83
SHS1YDL225W STB4P50104 949 aa3.62□□□□□ -1.83
SHS1YDL225W UBA2P52488 636 aa3.62□□□□□ -1.83
SHS1YDL225W TEL2P53038 688 aa3.62□□□□□ -1.83
SHS1YDL225W FHN1P53279 174 aa3.62□□□□□ -1.83
SHS1YDL225W MLH3Q12083 715 aa3.62□□□□□ -1.83
SHS1YDL225W SLX4Q12098 748 aa3.62□□□□□ -1.83
SHS1YDL225W CHS5Q12114 671 aaKnown RBP3.62□□□□□ -1.83
SHS1YDL225W MPD2Q99316 277 aa3.62□□□□□ -1.83
SHS1YDL225W YEL076C-AP0CX16 216 aa3.62□□□□□ -1.83
SHS1YDL225W YLR464WP0CX17 216 aa3.62□□□□□ -1.83
SHS1YDL225W CDS1P38221 457 aa3.62□□□□□ -1.83
SHS1YDL225W CBR1P38626 284 aaKnown RBP3.62□□□□□ -1.83
SHS1YDL225W YEL076CP39971 216 aa3.62□□□□□ -1.83
SHS1YDL225W IRC5P43610 853 aa3.62□□□□□ -1.83
SHS1YDL225W YJR008WP47085 338 aa3.62□□□□□ -1.83
SHS1YDL225W SSL2Q00578 843 aa3.62□□□□□ -1.83
SHS1YDL225W CLF1Q12309 687 aaPredicted RBP3.62□□□□□ -1.83
SHS1YDL225W PCL5P38794 229 aa3.61□□□□□ -1.83
SHS1YDL225W CRG1P38892 291 aaRIP-Chip data3.61□□□□□ -1.83not detected
SHS1YDL225W EAF5P39995 279 aa3.61□□□□□ -1.83
SHS1YDL225W PRM2P40534 656 aa3.61□□□□□ -1.83
SHS1YDL225W OMS1Q06668 471 aa3.61□□□□□ -1.83
SHS1YDL225W YOL057WQ08225 711 aa3.61□□□□□ -1.83
SHS1YDL225W THR1P17423 357 aaKnown RBP3.6□□□□□ -1.83
SHS1YDL225W MSS1P32559 526 aaPredicted RBP3.6□□□□□ -1.83
SHS1YDL225W RMA1P36001 430 aaKnown RBP3.6□□□□□ -1.83
SHS1YDL225W FTR1P40088 404 aa3.6□□□□□ -1.83
SHS1YDL225W KHA1P40309 873 aa3.6□□□□□ -1.83
SHS1YDL225W MPS3P47069 682 aa3.6□□□□□ -1.83
SHS1YDL225W HOL1P53389 586 aa3.6□□□□□ -1.83
SHS1YDL225W SPO1P53541 631 aa3.6□□□□□ -1.83
SHS1YDL225W YOR378WQ08902 515 aa3.6□□□□□ -1.83
SHS1YDL225W USV1Q12132 391 aa3.6□□□□□ -1.83
SHS1YDL225W MTC7P32633 139 aa3.59□□□□□ -1.83
SHS1YDL225W NIC96P34077 839 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms