RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YMR210WQ03649 449 aa5.43□□□□□ -1.54
SHR3YDL212W CDC43P18898 376 aa5.42□□□□□ -1.54
SHR3YDL212W EMP70P32802 667 aa5.42□□□□□ -1.54
SHR3YDL212W FAT1P38225 669 aa5.42□□□□□ -1.54
SHR3YDL212W YHR097CP38809 366 aaKnown RBP5.42□□□□□ -1.54
SHR3YDL212W OAF1P39720 1047 aaPredicted RBP5.42□□□□□ -1.54
SHR3YDL212W BUD8P41698 603 aa5.42□□□□□ -1.54
SHR3YDL212W MPS3P47069 682 aa5.42□□□□□ -1.54
SHR3YDL212W PMT3P47190 753 aa5.42□□□□□ -1.54
SHR3YDL212W NOP15P53927 220 aaPredicted RBP5.42□□□□□ -1.54
SHR3YDL212W DOS2P54858 310 aa5.42□□□□□ -1.54
SHR3YDL212W GIS1Q03833 894 aa5.42□□□□□ -1.54
SHR3YDL212W STP4Q07351 490 aa5.42□□□□□ -1.54
SHR3YDL212W CLF1Q12309 687 aaPredicted RBP5.42□□□□□ -1.54
SHR3YDL212W RPS17AP02407 136 aaKnown RBP5.41□□□□□ -1.54
SHR3YDL212W RPS21AP0C0V8 87 aaKnown RBP5.41□□□□□ -1.54
SHR3YDL212W RPS17BP14127 136 aaKnown RBP5.41□□□□□ -1.54
SHR3YDL212W GFA1P14742 717 aaKnown RBP5.41□□□□□ -1.54
SHR3YDL212W PRP28P23394 588 aa5.41□□□□□ -1.54
SHR3YDL212W OAF3P36023 863 aa5.41□□□□□ -1.54
SHR3YDL212W BDH2P39713 417 aa5.41□□□□□ -1.54
SHR3YDL212W GZF3P42944 551 aaKnown RBP5.41□□□□□ -1.54
SHR3YDL212W CTR1P49573 406 aa5.41□□□□□ -1.54
SHR3YDL212W SEC65P29478 273 aa5.4□□□□□ -1.54
SHR3YDL212W GLG1P36143 616 aa5.4□□□□□ -1.54
SHR3YDL212W BRN1P38170 754 aa5.4□□□□□ -1.54
SHR3YDL212W COS111P38308 924 aa5.4□□□□□ -1.54
SHR3YDL212W YGR237CP50089 785 aa5.4□□□□□ -1.54
SHR3YDL212W YGR151CP53287 111 aa5.4□□□□□ -1.54
SHR3YDL212W YFT2Q06676 274 aa5.4□□□□□ -1.54
SHR3YDL212W HFI1Q12060 488 aa5.4□□□□□ -1.54
SHR3YDL212W BNR1P40450 1375 aa5.4□□□□□ -1.55
SHR3YDL212W GLN4P13188 809 aaKnown RBP5.39□□□□□ -1.55
SHR3YDL212W FUB1P25659 250 aa5.39□□□□□ -1.55
SHR3YDL212W IES1P43579 692 aa5.39□□□□□ -1.55
SHR3YDL212W BFA1P47113 574 aa5.39□□□□□ -1.55
SHR3YDL212W YHM2Q04013 314 aa5.39□□□□□ -1.55
SHR3YDL212W VBA4Q04602 768 aaKnown RBP5.39□□□□□ -1.55
SHR3YDL212W YDL086WQ07505 273 aa5.39□□□□□ -1.55
SHR3YDL212W YTM1Q12024 460 aaPredicted RBP5.39□□□□□ -1.55
SHR3YDL212W KIN82P25341 720 aa5.38□□□□□ -1.55
SHR3YDL212W DMC1P25453 334 aa5.38□□□□□ -1.55
SHR3YDL212W CTP1P38152 299 aa5.38□□□□□ -1.55
SHR3YDL212W KSP1P38691 1029 aaKnown RBP5.38□□□□□ -1.55
SHR3YDL212W KHA1P40309 873 aa5.38□□□□□ -1.55
SHR3YDL212W MNN11P46985 422 aaKnown RBP5.38□□□□□ -1.55
SHR3YDL212W FAP7Q12055 197 aaPredicted RBP5.38□□□□□ -1.55
SHR3YDL212W RPS9BP05755 195 aaKnown RBP5.37□□□□□ -1.55
SHR3YDL212W CDC26P14724 124 aa5.37□□□□□ -1.55
SHR3YDL212W HCA4P20448 770 aaKnown RBP5.37□□□□□ -1.55
SHR3YDL212W FLO10P36170 1169 aa5.37□□□□□ -1.55
SHR3YDL212W UBP12P39538 1254 aa5.37□□□□□ -1.55
SHR3YDL212W NMA2P53204 395 aa5.37□□□□□ -1.55
SHR3YDL212W SNF12P53628 566 aa5.37□□□□□ -1.55
SHR3YDL212W HFD1Q04458 532 aa5.37□□□□□ -1.55
SHR3YDL212W APM4Q99186 491 aa5.37□□□□□ -1.55
SHR3YDL212W DAL3P32459 195 aa5.36□□□□□ -1.55
SHR3YDL212W MIT1P40002 666 aa5.36□□□□□ -1.55
SHR3YDL212W ATF1P40353 525 aa5.36□□□□□ -1.55
SHR3YDL212W VID28P40547 921 aa5.36□□□□□ -1.55
SHR3YDL212W ADY2P25613 283 aa5.35□□□□□ -1.55
SHR3YDL212W PPZ2P33329 710 aa5.35□□□□□ -1.55
SHR3YDL212W GMH1P36125 273 aa5.35□□□□□ -1.55
SHR3YDL212W RIX1P38883 763 aaPredicted RBP5.35□□□□□ -1.55
SHR3YDL212W DUN1P39009 513 aa5.35□□□□□ -1.55
SHR3YDL212W YIL166CP40445 542 aa5.35□□□□□ -1.55
SHR3YDL212W PXA1P41909 870 aa5.35□□□□□ -1.55
SHR3YDL212W IZH3Q07959 543 aa5.35□□□□□ -1.55
SHR3YDL212W RKI1Q12189 258 aa5.35□□□□□ -1.55
SHR3YDL212W LAM4P38800 1345 aa5.34□□□□□ -1.55
SHR3YDL212W SEC15P22224 910 aa5.34□□□□□ -1.55
SHR3YDL212W PRE4P30657 266 aa5.34□□□□□ -1.55
SHR3YDL212W SER1P33330 395 aaKnown RBP5.34□□□□□ -1.55
SHR3YDL212W YSH1Q06224 779 aaPredicted RBP5.34□□□□□ -1.55
SHR3YDL212W ABF1P14164 731 aa5.33□□□□□ -1.56
SHR3YDL212W TUP1P16649 713 aa5.33□□□□□ -1.56
SHR3YDL212W PEX2P32800 271 aa5.33□□□□□ -1.56
SHR3YDL212W YPT53P36019 220 aa5.33□□□□□ -1.56
SHR3YDL212W DID4P36108 232 aa5.33□□□□□ -1.56
SHR3YDL212W YMC2P38087 329 aa5.33□□□□□ -1.56
SHR3YDL212W CDS1P38221 457 aa5.33□□□□□ -1.56
SHR3YDL212W CRG1P38892 291 aaRIP-Chip data5.33□□□□□ -1.56not detected
SHR3YDL212W YEL020CP39994 560 aa5.33□□□□□ -1.56
SHR3YDL212W TAF4P50105 388 aa5.33□□□□□ -1.56
SHR3YDL212W SPO1P53541 631 aa5.33□□□□□ -1.56
SHR3YDL212W PTA1Q01329 785 aaPredicted RBP5.33□□□□□ -1.56
SHR3YDL212W TIM50Q02776 476 aa5.33□□□□□ -1.56
SHR3YDL212W BMS1Q08965 1183 aaKnown RBP5.33□□□□□ -1.56
SHR3YDL212W MTC7P32633 139 aa5.32□□□□□ -1.56
SHR3YDL212W ELF1P36053 145 aa5.32□□□□□ -1.56
SHR3YDL212W CUE2P36075 443 aaKnown RBP5.32□□□□□ -1.56
SHR3YDL212W TMN3P40071 706 aa5.32□□□□□ -1.56
SHR3YDL212W DIP5P53388 608 aa5.32□□□□□ -1.56
SHR3YDL212W LGE1Q02796 332 aaKnown RBP5.32□□□□□ -1.56
SHR3YDL212W ARO10Q06408 635 aa5.32□□□□□ -1.56
SHR3YDL212W PHO5P00635 467 aa5.31□□□□□ -1.56
SHR3YDL212W ATP12P22135 325 aa5.31□□□□□ -1.56
SHR3YDL212W PRP22P24384 1145 aaKnown RBP5.31□□□□□ -1.56
SHR3YDL212W MUP3P38734 546 aa5.31□□□□□ -1.56
SHR3YDL212W YEN1P40028 759 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms