RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W YLR419WQ06698 1435 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W SWI3P32591 825 aa2.53□□□□□ -2
MCD1YDL003W KSP1P38691 1029 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W YMR124WP39523 943 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W CHZ1P40019 153 aaPredicted RBP2.53□□□□□ -2
MCD1YDL003W ULP2P40537 1034 aaPredicted RBP2.53□□□□□ -2
MCD1YDL003W PSA1P41940 361 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W VPS4P52917 437 aa2.53□□□□□ -2
MCD1YDL003W COX18P53239 316 aa2.53□□□□□ -2
MCD1YDL003W REC102Q02721 264 aa2.53□□□□□ -2
MCD1YDL003W ETT1Q08421 412 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W MDM20Q12387 796 aaKnown RBP2.53□□□□□ -2
MCD1YDL003W PDR10P51533 1564 aa2.53□□□□□ -2.01
MCD1YDL003W TOP1P04786 769 aa2.52□□□□□ -2.01
MCD1YDL003W ZUO1P32527 433 aaKnown RBP2.52□□□□□ -2.01
MCD1YDL003W MIC60P36112 540 aa2.52□□□□□ -2.01
MCD1YDL003W PIG2P40187 538 aa2.52□□□□□ -2.01
MCD1YDL003W YGR125WP53273 1036 aa2.52□□□□□ -2.01
MCD1YDL003W ATP25Q03153 612 aa2.52□□□□□ -2.01
MCD1YDL003W YDL086WQ07505 273 aa2.52□□□□□ -2.01
MCD1YDL003W GEP3Q08622 556 aa2.52□□□□□ -2.01
MCD1YDL003W LSP1Q12230 341 aaKnown RBP2.52□□□□□ -2.01
MCD1YDL003W SFI1Q12369 946 aa2.52□□□□□ -2.01
MCD1YDL003W MYO4P32492 1471 aa2.52□□□□□ -2.01
MCD1YDL003W STU1P38198 1513 aa2.52□□□□□ -2.01
MCD1YDL003W CIT1P00890 479 aa2.51□□□□□ -2.01
MCD1YDL003W RNR1P21524 888 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W PEX1P24004 1043 aa2.51□□□□□ -2.01
MCD1YDL003W PEP1P32319 1579 aa2.51□□□□□ -2.01
MCD1YDL003W CCT5P40413 562 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W ATG36P46983 293 aa2.51□□□□□ -2.01
MCD1YDL003W ASN1P49089 572 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W NMA2P53204 395 aa2.51□□□□□ -2.01
MCD1YDL003W THO2P53552 1597 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W PAP2P53632 584 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W GRX3Q03835 250 aa2.51□□□□□ -2.01
MCD1YDL003W PDS5Q04264 1277 aa2.51□□□□□ -2.01
MCD1YDL003W RGC1Q06108 1083 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
MCD1YDL003W RVB2Q12464 471 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W RAD9P14737 1309 aa2.51□□□□□ -2.01
MCD1YDL003W PET111P08468 800 aa2.51□□□□□ -2.01
MCD1YDL003W SRP54P20424 541 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W SWH1P35845 1188 aa2.51□□□□□ -2.01
MCD1YDL003W APL3P38065 1025 aa2.51□□□□□ -2.01
MCD1YDL003W HXT16P47185 567 aa2.51□□□□□ -2.01
MCD1YDL003W RSC1P53236 928 aa2.51□□□□□ -2.01
MCD1YDL003W MDG1P53885 366 aa2.51□□□□□ -2.01
MCD1YDL003W YPL068CQ02749 293 aa2.51□□□□□ -2.01
MCD1YDL003W BMS1Q08965 1183 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W NOP14Q99207 810 aaKnown RBP2.51□□□□□ -2.01
MCD1YDL003W LAM4P38800 1345 aa2.5□□□□□ -2.01
MCD1YDL003W PHO5P00635 467 aa2.5□□□□□ -2.01
MCD1YDL003W STE4P18851 423 aa2.5□□□□□ -2.01
MCD1YDL003W HOT13P36078 116 aa2.5□□□□□ -2.01
MCD1YDL003W RRP14P36080 434 aaKnown RBP2.5□□□□□ -2.01
MCD1YDL003W NAB3P38996 802 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
MCD1YDL003W CIN4P39110 191 aa2.5□□□□□ -2.01
MCD1YDL003W GET2P40056 285 aa2.5□□□□□ -2.01
MCD1YDL003W RAD4P14736 754 aa2.49□□□□□ -2.01
MCD1YDL003W HSC82P15108 705 aaKnown RBP2.49□□□□□ -2.01
MCD1YDL003W PRP28P23394 588 aa2.49□□□□□ -2.01
MCD1YDL003W BYE1P36106 594 aa2.49□□□□□ -2.01
MCD1YDL003W MED8P38304 223 aa2.49□□□□□ -2.01
MCD1YDL003W MIP6P38760 659 aaKnown RBP2.49□□□□□ -2.01
MCD1YDL003W YHR097CP38809 366 aaKnown RBP2.49□□□□□ -2.01
MCD1YDL003W RIO2P40160 425 aaKnown RBP2.49□□□□□ -2.01
MCD1YDL003W NPY1P53164 384 aa2.49□□□□□ -2.01
MCD1YDL003W ECM16Q04217 1267 aaKnown RBP2.49□□□□□ -2.01
MCD1YDL003W HFD1Q04458 532 aa2.49□□□□□ -2.01
MCD1YDL003W TSC11P40061 1430 aa2.49□□□□□ -2.01
MCD1YDL003W YPK9Q12697 1472 aa2.49□□□□□ -2.01
MCD1YDL003W TPK2P06245 380 aa2.48□□□□□ -2.01
MCD1YDL003W NOP1P15646 327 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W KAR3P17119 729 aa2.48□□□□□ -2.01
MCD1YDL003W BCS1P32839 456 aa2.48□□□□□ -2.01
MCD1YDL003W RPN10P38886 268 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W MIT1P40002 666 aa2.48□□□□□ -2.01
MCD1YDL003W BUD27P43573 796 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
MCD1YDL003W BNA2P47125 453 aa2.48□□□□□ -2.01
MCD1YDL003W MRS2Q01926 470 aa2.48□□□□□ -2.01
MCD1YDL003W GIN4Q12263 1142 aa2.48□□□□□ -2.01
MCD1YDL003W SEC39Q12745 709 aa2.48□□□□□ -2.01
MCD1YDL003W IRC20Q06554 1556 aa2.48□□□□□ -2.01
MCD1YDL003W TRM3Q07527 1436 aa2.48□□□□□ -2.01
MCD1YDL003W SCC2Q04002 1493 aa2.48□□□□□ -2.01
MCD1YDL003W EUG1P32474 517 aa2.48□□□□□ -2.01
MCD1YDL003W MFT1P33441 392 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W GDT1P38301 280 aaPredicted RBP2.48□□□□□ -2.01
MCD1YDL003W RTT107P38850 1070 aa2.48□□□□□ -2.01
MCD1YDL003W RSM25P40496 264 aa2.48□□□□□ -2.01
MCD1YDL003W TIM54P47045 478 aa2.48□□□□□ -2.01
MCD1YDL003W MPP10P47083 593 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W NGL2Q03264 515 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W YDR338CQ05497 695 aa2.48□□□□□ -2.01
MCD1YDL003W IRC3Q06683 689 aa2.48□□□□□ -2.01
MCD1YDL003W VPS36Q06696 566 aa2.48□□□□□ -2.01
MCD1YDL003W YDL144CQ07589 356 aa2.48□□□□□ -2.01
MCD1YDL003W CHS5Q12114 671 aaKnown RBP2.48□□□□□ -2.01
MCD1YDL003W AI5_ALPHAQ9ZZX1 630 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms