RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	ATP25	Q03153	612 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	JIP4	Q03361	876 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	JIP5	Q06214	492 aa	Predicted RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	YPR097W	Q06839	1073 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
PDI1	YCL043C	MLH2	Q07980	695 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	SPO21	Q12411	609 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	RTP1	Q12751	981 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	YDR461C-A	Q2V2P7	80 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	COT1	P32798	439 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	MRE11	P32829	692 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	TFC4	P33339	1025 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	ASH1	P34233	588 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	MAC1	P35192	417 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	FES1	P38260	290 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	BSD2	P38356	321 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	SET5	P38890	526 aa	Known RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	TFG1	P41895	735 aa	Predicted RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	STB1	P42845	420 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	COS5	P47187	383 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	KAP114	P53067	1004 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	HOP2	P53187	214 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	COS6	P53344	381 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	CPR6	P53691	371 aa	Known RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	TIM8	P57744	87 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	ADE12	P80210	433 aa	Known RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.38	□□□□□ -1.55	not detected
PDI1	YCL043C	COQ9	Q05779	260 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	SIL1	Q08199	421 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	SMC5	Q08204	1093 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	CDC53	Q12018	815 aa	Known RBP	5.38	□□□□□ -1.55
PDI1	YCL043C	TAF3	Q12297	353 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	HIF1	Q12373	385 aa		5.38	□□□□□ -1.55
PDI1	YCL043C	TRP2	P00899	507 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	SWI6	P09959	803 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	POL3	P15436	1097 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	PRP9	P19736	530 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	YUR1	P26725	428 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	BRF1	P29056	596 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	EFT1	P32324	842 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	EFB1	P32471	206 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	PPG1	P32838	368 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	RIB7	P33312	244 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	SLA2	P33338	968 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	TIF3	P34167	436 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	JNM1	P36224	373 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	HSM3	P38348	480 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	SAK1	P38990	1142 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	YEL025C	P39991	1188 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	ALG5	P40350	334 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	JEM1	P40358	645 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	KTR7	P40504	517 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	RPS7B	P48164	190 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	SCS3	P53012	380 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	RTT102	P53330	157 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	RPL22B	P56628	122 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	HMO1	Q03973	246 aa	Known RBP	5.37	□□□□□ -1.55
PDI1	YCL043C	DON1	Q05610	365 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	GGA1	Q06336	557 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	GPI13	Q07830	1017 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	IES4	Q08561	116 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	YOR238W	Q08634	303 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	CIR2	Q08822	631 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	RUP1	Q12242	671 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	GLE1	Q12315	538 aa		5.37	□□□□□ -1.55
PDI1	YCL043C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.36	□□□□□ -1.55	not detected
PDI1	YCL043C	SIS1	P25294	352 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	KIP2	P28743	706 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	MUD1	P32605	298 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	VPS35	P34110	944 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	YKR015C	P36111	568 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	APE3	P37302	537 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	GRS1	P38088	690 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	ESBP6	P53918	673 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	SFB2	P53953	876 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	YNL040W	P53960	456 aa	Predicted RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	LGE1	Q02796	332 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	UTP14	Q04500	899 aa	Known RBP	5.36	□□□□□ -1.55
PDI1	YCL043C	SLX4	Q12098	748 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	GET4	Q12125	312 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	WHI5	Q12416	295 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	TRM11	Q12463	433 aa		5.36	□□□□□ -1.55
PDI1	YCL043C	ERG11	P10614	530 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	URA4	P20051	364 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	SPS22	P25380	463 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	KIP1	P28742	1111 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	GUT1	P32190	709 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	IRE1	P32361	1115 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	PLC1	P32383	869 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	PEP12	P32854	288 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	TOM20	P35180	183 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	KES1	P35844	434 aa	Known RBP	5.35	□□□□□ -1.55
PDI1	YCL043C	UBX7	P38349	436 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	RCK2	P38623	610 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	EAF5	P39995	279 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	PDS1	P40316	373 aa	Predicted RBP	5.35	□□□□□ -1.55
PDI1	YCL043C	SYG1	P40528	902 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	HXT8	P40886	569 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	RPA14	P50106	137 aa		5.35	□□□□□ -1.55
PDI1	YCL043C	YGR021W	P53212	290 aa		5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms