RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	SER1	P33330	395 aa	Known RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	YHR097C	P38809	366 aa	Known RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	BUD8	P41698	603 aa		4.19	□□□□□ -1.74
YCL020W	YCL020W	GZF3	P42944	551 aa	Known RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	BIT61	P47041	543 aa		4.19	□□□□□ -1.74
YCL020W	YCL020W	BFA1	P47113	574 aa		4.19	□□□□□ -1.74
YCL020W	YCL020W	HFD1	Q04458	532 aa		4.19	□□□□□ -1.74
YCL020W	YCL020W	YTM1	Q12024	460 aa	Predicted RBP	4.19	□□□□□ -1.74
YCL020W	YCL020W	RPS9B	P05755	195 aa	Known RBP	4.18	□□□□□ -1.74
YCL020W	YCL020W	ERG20	P08524	352 aa	Known RBP	4.18	□□□□□ -1.74
YCL020W	YCL020W	SEC6	P32844	805 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	TDP1	P38319	544 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	BIT2	P38346	545 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	NDC80	P40460	691 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	DIA2	Q08496	732 aa	Predicted RBP	4.18	□□□□□ -1.74
YCL020W	YCL020W	HFI1	Q12060	488 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	CHS5	Q12114	671 aa	Known RBP	4.18	□□□□□ -1.74
YCL020W	YCL020W	POM34	Q12445	299 aa		4.18	□□□□□ -1.74
YCL020W	YCL020W	KIN3	P22209	435 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	PET127	P32606	800 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	COS111	P38308	924 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	DUN1	P39009	513 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	YJL206C	P39529	758 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	VID28	P40547	921 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	MNN11	P46985	422 aa	Known RBP	4.17	□□□□□ -1.74
YCL020W	YCL020W	MPS3	P47069	682 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	NMA2	P53204	395 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	TIM50	Q02776	476 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	AIM44	Q99299	758 aa		4.17	□□□□□ -1.74
YCL020W	YCL020W	CDC26	P14724	124 aa		4.16	□□□□□ -1.74
YCL020W	YCL020W	ATP12	P22135	325 aa		4.16	□□□□□ -1.74
YCL020W	YCL020W	MSS1	P32559	526 aa	Predicted RBP	4.16	□□□□□ -1.74
YCL020W	YCL020W	PIG2	P40187	538 aa		4.16	□□□□□ -1.74
YCL020W	YCL020W	VBA4	Q04602	768 aa	Known RBP	4.16	□□□□□ -1.74
YCL020W	YCL020W	YFT2	Q06676	274 aa		4.16	□□□□□ -1.74
YCL020W	YCL020W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
YCL020W	YCL020W	EUG1	P32474	517 aa		4.15	□□□□□ -1.75
YCL020W	YCL020W	EMP70	P32802	667 aa		4.15	□□□□□ -1.75
YCL020W	YCL020W	KSP1	P38691	1029 aa	Known RBP	4.15	□□□□□ -1.75
YCL020W	YCL020W	VPS73	P53142	486 aa	Known RBP	4.15	□□□□□ -1.75
YCL020W	YCL020W	YGR151C	P53287	111 aa		4.15	□□□□□ -1.75
YCL020W	YCL020W	YAP1802	P53309	568 aa		4.15	□□□□□ -1.75
YCL020W	YCL020W	TMA17	Q12513	150 aa		4.15	□□□□□ -1.75
YCL020W	YCL020W	TUP1	P16649	713 aa		4.14	□□□□□ -1.75
YCL020W	YCL020W	KHA1	P40309	873 aa		4.14	□□□□□ -1.75
YCL020W	YCL020W	QRI1	P43123	477 aa	Known RBP	4.14	□□□□□ -1.75
YCL020W	YCL020W	IES1	P43579	692 aa		4.14	□□□□□ -1.75
YCL020W	YCL020W	ATG4	P53867	494 aa		4.14	□□□□□ -1.75
YCL020W	YCL020W	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
YCL020W	YCL020W	SEC15	P22224	910 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	ELF1	P36053	145 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	TMN3	P40071	706 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	STU2	P46675	888 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	TAH11	P47112	604 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	CTR1	P49573	406 aa		4.13	□□□□□ -1.75
YCL020W	YCL020W	PTA1	Q01329	785 aa	Predicted RBP	4.13	□□□□□ -1.75
YCL020W	YCL020W	KIN82	P25341	720 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	FUB1	P25659	250 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	HXT4	P32467	576 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	PEX2	P32800	271 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	DID4	P36108	232 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	GLG1	P36143	616 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	CDS1	P38221	457 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	CRG1	P38892	291 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
YCL020W	YCL020W	GPP2	P40106	250 aa	Known RBP	4.12	□□□□□ -1.75
YCL020W	YCL020W	ARG2	P40360	574 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	PXA1	P41909	870 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	TAF3	Q12297	353 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	TAD3	Q9URQ3	322 aa		4.12	□□□□□ -1.75
YCL020W	YCL020W	BNR1	P40450	1375 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	LAM4	P38800	1345 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	CDC43	P18898	376 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	PRP28	P23394	588 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	PRE4	P30657	266 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	CTP1	P38152	299 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	EHT1	P38295	451 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	ENP1	P38333	483 aa	Known RBP	4.11	□□□□□ -1.75
YCL020W	YCL020W	YHR033W	P38690	423 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	TAF4	P50105	388 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	DIP5	P53388	608 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	ECM38	Q05902	660 aa	Predicted RBP	4.11	□□□□□ -1.75
YCL020W	YCL020W	YPR027C	Q12079	277 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	APM4	Q99186	491 aa		4.11	□□□□□ -1.75
YCL020W	YCL020W	BDH2	P39713	417 aa		4.1	□□□□□ -1.75
YCL020W	YCL020W	SNF12	P53628	566 aa		4.1	□□□□□ -1.75
YCL020W	YCL020W	NGL1	Q08213	363 aa	Known RBP	4.1	□□□□□ -1.75
YCL020W	YCL020W	RMP1	Q12530	201 aa		4.1	□□□□□ -1.75
YCL020W	YCL020W	STE12	P13574	688 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	HCA4	P20448	770 aa	Known RBP	4.09	□□□□□ -1.75
YCL020W	YCL020W	MTC7	P32633	139 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	PPZ2	P33329	710 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	TFC4	P33339	1025 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	MIT1	P40002	666 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	PRM2	P40534	656 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	NIT2	P47016	307 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	SPC98	P53540	846 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	IZH3	Q07959	543 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	RKI1	Q12189	258 aa		4.09	□□□□□ -1.75
YCL020W	YCL020W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms