RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C SAH1P39954 449 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C TMA108P40462 946 aa7.19□□□□□ -1.26
TDP1YBR223C SNZ3P43545 298 aa7.19□□□□□ -1.26
TDP1YBR223C NNF2P53253 936 aa7.19□□□□□ -1.26
TDP1YBR223C SNZ2P53824 298 aa7.19□□□□□ -1.26
TDP1YBR223C YNL040WP53960 456 aaPredicted RBP7.19□□□□□ -1.26
TDP1YBR223C HOT1Q03213 719 aa7.19□□□□□ -1.26
TDP1YBR223C THI7Q05998 598 aa7.19□□□□□ -1.26
TDP1YBR223C LCB5Q06147 687 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C TDA5Q06417 326 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C SGT2Q12118 346 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C PUS1Q12211 544 aaKnown RBP7.19□□□□□ -1.26
TDP1YBR223C YDR461C-AQ2V2P7 80 aa7.19□□□□□ -1.26
TDP1YBR223C RAD3P06839 778 aa7.18□□□□□ -1.26
TDP1YBR223C ASP3-2P0CX77 362 aa7.18□□□□□ -1.26
TDP1YBR223C ASP3-3P0CX78 362 aa7.18□□□□□ -1.26
TDP1YBR223C ASP3-4P0CX79 362 aa7.18□□□□□ -1.26
TDP1YBR223C ASP3-1P0CZ17 362 aa7.18□□□□□ -1.26
TDP1YBR223C SCJ1P25303 377 aa7.18□□□□□ -1.26
TDP1YBR223C RPC19P28000 142 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C SEC1P30619 724 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C TOA1P32773 286 aa7.18□□□□□ -1.26
TDP1YBR223C SKG6P32900 734 aaPredicted RBP7.18□□□□□ -1.26
TDP1YBR223C DBP7P36120 742 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C FZO1P38297 855 aa7.18□□□□□ -1.26
TDP1YBR223C GUA1P38625 525 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C SAW1P39735 261 aa7.18□□□□□ -1.26
TDP1YBR223C LIA1P47120 325 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C YMR321CQ04898 105 aa7.18□□□□□ -1.26
TDP1YBR223C KAP95Q06142 861 aaKnown RBP7.18□□□□□ -1.26
TDP1YBR223C HFI1Q12060 488 aa7.18□□□□□ -1.26
TDP1YBR223C GNT1Q12096 491 aa7.18□□□□□ -1.26
TDP1YBR223C ILS1P09436 1072 aaKnown RBP7.17□□□□□ -1.26
TDP1YBR223C YMR085WP0CF18 432 aa7.17□□□□□ -1.26
TDP1YBR223C SSC1P0CS90 654 aaKnown RBP7.17□□□□□ -1.26
TDP1YBR223C EST1P17214 699 aaPredicted RBP7.17□□□□□ -1.26
TDP1YBR223C OXP1P28273 1286 aa7.17□□□□□ -1.26
TDP1YBR223C BCS1P32839 456 aa7.17□□□□□ -1.26
TDP1YBR223C SET3P36124 751 aa7.17□□□□□ -1.26
TDP1YBR223C ERP5P38819 212 aa7.17□□□□□ -1.26
TDP1YBR223C FLC2P39719 783 aa7.17□□□□□ -1.26
TDP1YBR223C SAE2P46946 345 aa7.17□□□□□ -1.26
TDP1YBR223C YJL045WP47052 634 aa7.17□□□□□ -1.26
TDP1YBR223C RRT6P53117 311 aaPredicted RBP7.17□□□□□ -1.26
TDP1YBR223C MNP1P53163 194 aaPredicted RBP7.17□□□□□ -1.26
TDP1YBR223C YGL036WP53185 909 aaPredicted RBP7.17□□□□□ -1.26
TDP1YBR223C YNL247WP53852 767 aaKnown RBP7.17□□□□□ -1.26
TDP1YBR223C YNL144CP53907 740 aa7.17□□□□□ -1.26
TDP1YBR223C MSC6Q08818 692 aaKnown RBP7.17□□□□□ -1.26
TDP1YBR223C TRE1Q08919 783 aa7.17□□□□□ -1.26
TDP1YBR223C YLR053CQ12026 108 aa7.17□□□□□ -1.26
TDP1YBR223C RPL4AP10664 362 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C AAD3P25612 363 aa7.16□□□□□ -1.26
TDP1YBR223C URA7P28274 579 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C MEI4P29467 408 aa7.16□□□□□ -1.26
TDP1YBR223C SWC5P38326 303 aa7.16□□□□□ -1.26
TDP1YBR223C OAF1P39720 1047 aaPredicted RBP7.16□□□□□ -1.26
TDP1YBR223C TFG1P41895 735 aaPredicted RBP7.16□□□□□ -1.26
TDP1YBR223C ALY2P47029 1046 aa7.16□□□□□ -1.26
TDP1YBR223C JJJ3P47138 172 aa7.16□□□□□ -1.26
TDP1YBR223C RPL4BP49626 362 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C MND1P53102 219 aa7.16□□□□□ -1.26
TDP1YBR223C GTB1Q04924 702 aa7.16□□□□□ -1.26
TDP1YBR223C OSW1Q08692 278 aa7.16□□□□□ -1.26
TDP1YBR223C YRR1Q12172 810 aa7.16□□□□□ -1.26
TDP1YBR223C TRM11Q12463 433 aa7.16□□□□□ -1.26
TDP1YBR223C ZPS1Q12512 249 aa7.16□□□□□ -1.26
TDP1YBR223C YPT6Q99260 215 aa7.16□□□□□ -1.26
TDP1YBR223C HEM3P28789 327 aa7.16□□□□□ -1.26
TDP1YBR223C RME1P32338 300 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C COY1P34237 679 aa7.16□□□□□ -1.26
TDP1YBR223C NOP4P37838 685 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C SCC4P40090 624 aa7.16□□□□□ -1.26
TDP1YBR223C UBP6P43593 499 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C ZAP1P47043 880 aa7.16□□□□□ -1.26
TDP1YBR223C YJR142WP47173 342 aa7.16□□□□□ -1.26
TDP1YBR223C ADE13Q05911 482 aaKnown RBP7.16□□□□□ -1.26
TDP1YBR223C AIM39Q08223 395 aa7.16□□□□□ -1.26
TDP1YBR223C EMP46Q12396 444 aa7.16□□□□□ -1.26
TDP1YBR223C SEC39Q12745 709 aa7.16□□□□□ -1.26
TDP1YBR223C PRR1P28708 518 aa7.15□□□□□ -1.27
TDP1YBR223C MRP4P32902 394 aa7.15□□□□□ -1.27
TDP1YBR223C SMY2P32909 740 aaKnown RBP7.15□□□□□ -1.27
TDP1YBR223C ETR1P38071 380 aa7.15□□□□□ -1.27
TDP1YBR223C YMC2P38087 329 aa7.15□□□□□ -1.27
TDP1YBR223C RFC3P38629 340 aa7.15□□□□□ -1.27
TDP1YBR223C YIL054WP40524 105 aa7.15□□□□□ -1.27
TDP1YBR223C ALT1P52893 592 aa7.15□□□□□ -1.27
TDP1YBR223C RTA1P53047 317 aa7.15□□□□□ -1.27
TDP1YBR223C PCL10P53124 433 aa7.15□□□□□ -1.27
TDP1YBR223C ERP6P53198 216 aa7.15□□□□□ -1.27
TDP1YBR223C CDC55Q00362 526 aa7.15□□□□□ -1.27
TDP1YBR223C LGE1Q02796 332 aaKnown RBP7.15□□□□□ -1.27
TDP1YBR223C CWC21Q03375 135 aaKnown RBP7.15□□□□□ -1.27
TDP1YBR223C PCD1Q12524 340 aa7.15□□□□□ -1.27
TDP1YBR223C WHI2P12611 486 aa7.14□□□□□ -1.27
TDP1YBR223C PUT4P15380 627 aa7.14□□□□□ -1.27
TDP1YBR223C REC107P21651 314 aa7.14□□□□□ -1.27
TDP1YBR223C YUR1P26725 428 aa7.14□□□□□ -1.27
TDP1YBR223C BUD14P27637 709 aa7.14□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms