RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	NOP9	P47077	666 aa	Known RBP	4.96	□□□□□ -1.62
LDH1	YBR204C	RNR4	P49723	345 aa	Known RBP	4.96	□□□□□ -1.62
LDH1	YBR204C	YPS7	Q06325	596 aa		4.96	□□□□□ -1.62
LDH1	YBR204C	SGO1	Q08490	590 aa		4.96	□□□□□ -1.62
LDH1	YBR204C	COX11	P19516	300 aa	Known RBP	4.95	□□□□□ -1.62
LDH1	YBR204C	HEM12	P32347	362 aa	Predicted RBP	4.95	□□□□□ -1.62
LDH1	YBR204C	YPT7	P32939	208 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	PCL5	P38794	229 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	VID28	P40547	921 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	RSC8	P43609	557 aa	Known RBP	4.95	□□□□□ -1.62
LDH1	YBR204C	SPC105	P53148	917 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	RIA1	P53893	1110 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	RCR2	Q03446	210 aa	Known RBP	4.95	□□□□□ -1.62
LDH1	YBR204C	VPS36	Q06696	566 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LDH1	YBR204C	NDJ1	Q12366	352 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LDH1	YBR204C	ECM3	Q99252	613 aa		4.95	□□□□□ -1.62
LDH1	YBR204C	ERG20	P08524	352 aa	Known RBP	4.94	□□□□□ -1.62
LDH1	YBR204C	KAR1	P11927	433 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	CDC26	P14724	124 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	IME1	P21190	360 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	PEX1	P24004	1043 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	TDP1	P38319	544 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	BCD1	P38772	366 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	FMO1	P38866	432 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	DUN1	P39009	513 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	CCT3	P39077	534 aa	Known RBP	4.94	□□□□□ -1.62
LDH1	YBR204C	NUP60	P39705	539 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	EMP65	P40085	556 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	SLD3	P53135	668 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	STP4	Q07351	490 aa		4.94	□□□□□ -1.62
LDH1	YBR204C	TMA7	Q3E764	64 aa	Known RBP	4.94	□□□□□ -1.62
LDH1	YBR204C	HCA4	P20448	770 aa	Known RBP	4.93	□□□□□ -1.62
LDH1	YBR204C	PEX2	P32800	271 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	BIT61	P47041	543 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	UBC11	P52492	156 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	TGL2	P54857	326 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	SND1	Q04007	877 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	VBA4	Q04602	768 aa	Known RBP	4.93	□□□□□ -1.62
LDH1	YBR204C	PHM6	Q05637	104 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	THI22	Q06490	572 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	DIA2	Q08496	732 aa	Predicted RBP	4.93	□□□□□ -1.62
LDH1	YBR204C	IRC13	Q08630	104 aa		4.93	□□□□□ -1.62
LDH1	YBR204C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
LDH1	YBR204C	ATP12	P22135	325 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	KIN3	P22209	435 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	PPZ2	P33329	710 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	SNM1	P40993	198 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	BUD8	P41698	603 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	ENP2	P48234	707 aa	Known RBP	4.92	□□□□□ -1.62
LDH1	YBR204C	YNL034W	P53963	612 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	YNL018C	P53976	612 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	PEX15	Q08215	383 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	POM34	Q12445	299 aa		4.92	□□□□□ -1.62
LDH1	YBR204C	KIN82	P25341	720 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	MVD1	P32377	396 aa	Known RBP	4.91	□□□□□ -1.62
LDH1	YBR204C	MF(ALPHA)2	P32435	120 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	SEC6	P32844	805 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	HIS7	P33734	552 aa	Known RBP	4.91	□□□□□ -1.62
LDH1	YBR204C	FMP52	P40008	231 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	PXA1	P41909	870 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	YJR008W	P47085	338 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	NSE5	Q03718	556 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	PPN1	Q04119	674 aa		4.91	□□□□□ -1.62
LDH1	YBR204C	RGC1	Q06108	1083 aa	Known RBP	4.91	□□□□□ -1.62
LDH1	YBR204C	SIR3	P06701	978 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	PRP22	P24384	1145 aa	Known RBP	4.9	□□□□□ -1.63
LDH1	YBR204C	HXT4	P32467	576 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	HIR1	P32479	840 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	REV7	P38927	245 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	PEA2	P40091	420 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	TAF4	P50105	388 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	VPS73	P53142	486 aa	Known RBP	4.9	□□□□□ -1.63
LDH1	YBR204C	ECM38	Q05902	660 aa	Predicted RBP	4.9	□□□□□ -1.63
LDH1	YBR204C	NGL1	Q08213	363 aa	Known RBP	4.9	□□□□□ -1.63
LDH1	YBR204C	YOL057W	Q08225	711 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	SLX4	Q12098	748 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	SUT2	Q12286	268 aa		4.9	□□□□□ -1.63
LDH1	YBR204C	RPS9B	P05755	195 aa	Known RBP	4.89	□□□□□ -1.63
LDH1	YBR204C	DGR2	P32330	852 aa		4.89	□□□□□ -1.63
LDH1	YBR204C	CBR1	P38626	284 aa	Known RBP	4.89	□□□□□ -1.63
LDH1	YBR204C	SRP68	P38687	599 aa	Known RBP	4.89	□□□□□ -1.63
LDH1	YBR204C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
LDH1	YBR204C	NOP2	P40991	618 aa	Known RBP	4.89	□□□□□ -1.63
LDH1	YBR204C	PAN2	P53010	1115 aa	Predicted RBP	4.89	□□□□□ -1.63
LDH1	YBR204C	SSL2	Q00578	843 aa		4.89	□□□□□ -1.63
LDH1	YBR204C	YKL033W-A	Q86ZR7	236 aa		4.89	□□□□□ -1.63
LDH1	YBR204C	SEC15	P22224	910 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	BCS1	P32839	456 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	SFB3	P38810	929 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	IRC5	P43610	853 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	TAH11	P47112	604 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	TEL2	P53038	688 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	SPO1	P53541	631 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	CLF1	Q12309	687 aa	Predicted RBP	4.88	□□□□□ -1.63
LDH1	YBR204C	MPD2	Q99316	277 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	BNR1	P40450	1375 aa		4.88	□□□□□ -1.63
LDH1	YBR204C	TUB1	P09733	447 aa	Known RBP	4.87	□□□□□ -1.63
LDH1	YBR204C	PRP28	P23394	588 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms