RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W GEM1P39722 662 aa6.27□□□□□ -1.41
SHP1YBL058W GIP4P39732 760 aa6.27□□□□□ -1.41
SHP1YBL058W SAH1P39954 449 aaKnown RBP6.27□□□□□ -1.41
SHP1YBL058W PTC2P39966 464 aaKnown RBP6.27□□□□□ -1.41
SHP1YBL058W AVT2P39981 480 aa6.27□□□□□ -1.41
SHP1YBL058W DSE1P40077 573 aa6.27□□□□□ -1.41
SHP1YBL058W YIL161WP40449 235 aaKnown RBP6.27□□□□□ -1.41
SHP1YBL058W JIP5Q06214 492 aaPredicted RBP6.27□□□□□ -1.41
SHP1YBL058W EAF1Q06337 982 aa6.27□□□□□ -1.41
SHP1YBL058W ERF2Q06551 359 aa6.27□□□□□ -1.41
SHP1YBL058W RNR1P21524 888 aaKnown RBP6.26□□□□□ -1.41
SHP1YBL058W SPT5P27692 1063 aaKnown RBP6.26□□□□□ -1.41
SHP1YBL058W YBR225WP38321 900 aa6.26□□□□□ -1.41
SHP1YBL058W TIF5P38431 405 aaKnown RBP6.26□□□□□ -1.41
SHP1YBL058W RPA49Q01080 415 aaPredicted RBP6.26□□□□□ -1.41
SHP1YBL058W TOF2Q02208 771 aa6.26□□□□□ -1.41
SHP1YBL058W SEG1Q04279 960 aa6.26□□□□□ -1.41
SHP1YBL058W ECM22Q05958 814 aaPredicted RBP6.26□□□□□ -1.41
SHP1YBL058W IWR1Q07532 353 aaPredicted RBP6.26□□□□□ -1.41
SHP1YBL058W MAK16P10962 306 aaPredicted RBP6.25□□□□□ -1.41
SHP1YBL058W REV1P12689 985 aa6.25□□□□□ -1.41
SHP1YBL058W CDC42P19073 191 aa6.25□□□□□ -1.41
SHP1YBL058W KIN3P22209 435 aa6.25□□□□□ -1.41
SHP1YBL058W SAT4P25333 603 aaKnown RBP6.25□□□□□ -1.41
SHP1YBL058W EFB1P32471 206 aaKnown RBP6.25□□□□□ -1.41
SHP1YBL058W TCD2P36101 447 aaKnown RBP6.25□□□□□ -1.41
SHP1YBL058W GIP1P38229 639 aa6.25□□□□□ -1.41
SHP1YBL058W FHL1P39521 936 aa6.25□□□□□ -1.41
SHP1YBL058W OSW5P40219 148 aa6.25□□□□□ -1.41
SHP1YBL058W YJR054WP47114 497 aa6.25□□□□□ -1.41
SHP1YBL058W MTD1Q02046 320 aaKnown RBP6.25□□□□□ -1.41
SHP1YBL058W YPL062WQ02781 134 aa6.25□□□□□ -1.41
SHP1YBL058W MZM1Q03429 123 aaPredicted RBP6.25□□□□□ -1.41
SHP1YBL058W HPF1Q05164 967 aa6.25□□□□□ -1.41
SHP1YBL058W YCG1Q06680 1035 aa6.25□□□□□ -1.41
SHP1YBL058W YOL075CQ08234 1294 aa6.25□□□□□ -1.41
SHP1YBL058W YDL206WQ12424 762 aa6.25□□□□□ -1.41
SHP1YBL058W RPL22AP05749 121 aaKnown RBP6.24□□□□□ -1.41
SHP1YBL058W BIK1P11709 440 aa6.24□□□□□ -1.41
SHP1YBL058W PAT1P25644 796 aaKnown RBP6.24□□□□□ -1.41
SHP1YBL058W DSS4P32601 143 aa6.24□□□□□ -1.41
SHP1YBL058W RFT1P38206 574 aaPredicted RBP6.24□□□□□ -1.41
SHP1YBL058W ERG10P41338 398 aaKnown RBP6.24□□□□□ -1.41
SHP1YBL058W GUF1P46943 645 aa6.24□□□□□ -1.41
SHP1YBL058W STR2P47164 639 aa6.24□□□□□ -1.41
SHP1YBL058W LSC2P53312 427 aa6.24□□□□□ -1.41
SHP1YBL058W BNI4P53858 892 aa6.24□□□□□ -1.41
SHP1YBL058W YPL014WQ02606 381 aa6.24□□□□□ -1.41
SHP1YBL058W YOR387CQ08910 206 aa6.24□□□□□ -1.41
SHP1YBL058W DDC1Q08949 612 aa6.24□□□□□ -1.41
SHP1YBL058W ENO2P00925 437 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W BI4P03879 638 aa6.23□□□□□ -1.41
SHP1YBL058W COX11P19516 300 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W VBA3P25594 458 aa6.23□□□□□ -1.41
SHP1YBL058W CDC11P32458 415 aa6.23□□□□□ -1.41
SHP1YBL058W XRS2P33301 854 aa6.23□□□□□ -1.41
SHP1YBL058W VBA5P36172 582 aa6.23□□□□□ -1.41
SHP1YBL058W YPT35P38815 214 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W YIR007WP40566 764 aa6.23□□□□□ -1.41
SHP1YBL058W CDC1P40986 491 aa6.23□□□□□ -1.41
SHP1YBL058W SBE2P42223 864 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W CPR7P47103 393 aa6.23□□□□□ -1.41
SHP1YBL058W FAL1Q12099 399 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W NBP2Q12163 236 aa6.23□□□□□ -1.41
SHP1YBL058W LPX1Q12405 387 aaKnown RBP6.23□□□□□ -1.41
SHP1YBL058W OM45P16547 393 aa6.22□□□□□ -1.41
SHP1YBL058W LRE1P25579 583 aaKnown RBP6.22□□□□□ -1.41
SHP1YBL058W SAC6P32599 642 aaKnown RBP6.22□□□□□ -1.41
SHP1YBL058W FIG4P42837 879 aa6.22□□□□□ -1.41
SHP1YBL058W NUP84P52891 726 aa6.22□□□□□ -1.41
SHP1YBL058W YNR065CP53751 1116 aa6.22□□□□□ -1.41
SHP1YBL058W KRE33P53914 1056 aaKnown RBP6.22□□□□□ -1.41
SHP1YBL058W STE20Q03497 939 aaKnown RBP6.22□□□□□ -1.41
SHP1YBL058W PPM1Q04081 328 aa6.22□□□□□ -1.41
SHP1YBL058W HRQ1Q05549 1077 aa6.22□□□□□ -1.41
SHP1YBL058W RCL1Q08096 367 aaPredicted RBP6.22□□□□□ -1.41
SHP1YBL058W APC5Q08683 685 aa6.22□□□□□ -1.41
SHP1YBL058W IRA1P18963 3092 aa6.22□□□□□ -1.41
SHP1YBL058W ENO1P00924 437 aaKnown RBP6.21□□□□□ -1.42
SHP1YBL058W PSO2P30620 661 aa6.21□□□□□ -1.42
SHP1YBL058W HSP78P33416 811 aa6.21□□□□□ -1.42
SHP1YBL058W NOP4P37838 685 aaKnown RBP6.21□□□□□ -1.42
SHP1YBL058W PIK1P39104 1066 aa6.21□□□□□ -1.42
SHP1YBL058W HEM14P40012 539 aa6.21□□□□□ -1.42
SHP1YBL058W RRN7P40992 514 aa6.21□□□□□ -1.42
SHP1YBL058W ASG7P46993 209 aa6.21□□□□□ -1.42
SHP1YBL058W COQ6P53318 479 aa6.21□□□□□ -1.42
SHP1YBL058W TDA7P53882 636 aaPredicted RBP6.21□□□□□ -1.42
SHP1YBL058W ECM3Q99252 613 aa6.21□□□□□ -1.42
SHP1YBL058W MSF1P08425 469 aa6.2□□□□□ -1.42
SHP1YBL058W HSF1P10961 833 aa6.2□□□□□ -1.42
SHP1YBL058W SPT16P32558 1035 aaKnown RBP6.2□□□□□ -1.42
SHP1YBL058W TFB1P32776 642 aa6.2□□□□□ -1.42
SHP1YBL058W YMC2P38087 329 aa6.2□□□□□ -1.42
SHP1YBL058W PPX1P38698 397 aa6.2□□□□□ -1.42
SHP1YBL058W CTM1P38818 585 aa6.2□□□□□ -1.42
SHP1YBL058W GDH3P39708 457 aa6.2□□□□□ -1.42
SHP1YBL058W RSM25P40496 264 aa6.2□□□□□ -1.42
SHP1YBL058W VEL1P53058 206 aa6.2□□□□□ -1.42
SHP1YBL058W SMA1Q02651 245 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms