RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C CSM3Q04659 317 aa5.71□□□□□ -1.5
RFA1YAR007C YLR297WQ05899 129 aa5.71□□□□□ -1.5
RFA1YAR007C VHS3Q08438 674 aa5.71□□□□□ -1.5
RFA1YAR007C YML002WP0CF17 737 aa5.71□□□□□ -1.5
RFA1YAR007C VMA2P16140 517 aaKnown RBP5.71□□□□□ -1.5
RFA1YAR007C ACE2P21192 770 aa5.71□□□□□ -1.5
RFA1YAR007C GSY1P23337 708 aa5.71□□□□□ -1.5
RFA1YAR007C MEF1P25039 761 aa5.71□□□□□ -1.5
RFA1YAR007C RRT12P25381 491 aa5.71□□□□□ -1.5
RFA1YAR007C HEM3P28789 327 aa5.71□□□□□ -1.5
RFA1YAR007C MCM5P29496 775 aaKnown RBP5.71□□□□□ -1.5
RFA1YAR007C CSE1P33307 960 aa5.71□□□□□ -1.5
RFA1YAR007C MDL2P33311 773 aa5.71□□□□□ -1.5
RFA1YAR007C COY1P34237 679 aa5.71□□□□□ -1.5
RFA1YAR007C CCL1P37366 393 aa5.71□□□□□ -1.5
RFA1YAR007C NCL1P38205 684 aaKnown RBP5.71□□□□□ -1.5
RFA1YAR007C PEX18P38855 283 aa5.71□□□□□ -1.5
RFA1YAR007C SPC97P38863 823 aa5.71□□□□□ -1.5
RFA1YAR007C SYG1P40528 902 aa5.71□□□□□ -1.5
RFA1YAR007C SHE4P51534 789 aa5.71□□□□□ -1.5
RFA1YAR007C YDR476CQ03362 224 aa5.71□□□□□ -1.5
RFA1YAR007C AIM33Q04516 312 aa5.71□□□□□ -1.5
RFA1YAR007C RPN8Q08723 338 aaKnown RBP5.71□□□□□ -1.5
RFA1YAR007C PGK1P00560 416 aaKnown RBP5.7□□□□□ -1.5
RFA1YAR007C EXO70P19658 623 aa5.7□□□□□ -1.5
RFA1YAR007C CLB2P24869 491 aa5.7□□□□□ -1.5
RFA1YAR007C AAD3P25612 363 aa5.7□□□□□ -1.5
RFA1YAR007C TPS2P31688 896 aaKnown RBP5.7□□□□□ -1.5
RFA1YAR007C TRZ1P36159 838 aaPredicted RBP5.7□□□□□ -1.5
RFA1YAR007C SLM4P38247 162 aa5.7□□□□□ -1.5
RFA1YAR007C EXO5P38289 585 aa5.7□□□□□ -1.5
RFA1YAR007C DIA4P38705 446 aaPredicted RBP5.7□□□□□ -1.5
RFA1YAR007C ETP1P38748 585 aaKnown RBP5.7□□□□□ -1.5
RFA1YAR007C BRL1P38770 471 aa5.7□□□□□ -1.5
RFA1YAR007C SPC72P39723 622 aa5.7□□□□□ -1.5
RFA1YAR007C CAB2P40506 365 aa5.7□□□□□ -1.5
RFA1YAR007C RFX1P48743 811 aa5.7□□□□□ -1.5
RFA1YAR007C MIG2P53035 382 aa5.7□□□□□ -1.5
RFA1YAR007C TMA20P89886 181 aaPredicted RBP5.7□□□□□ -1.5
RFA1YAR007C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5 RIP-Chip
RFA1YAR007C YMR027WQ04371 470 aa5.7□□□□□ -1.5
RFA1YAR007C MGR3Q04472 501 aa5.7□□□□□ -1.5
RFA1YAR007C PUS5Q06244 254 aa5.7□□□□□ -1.5
RFA1YAR007C ADY3Q07732 790 aa5.7□□□□□ -1.5
RFA1YAR007C DIA2Q08496 732 aaPredicted RBP5.7□□□□□ -1.5
RFA1YAR007C RRD2Q12461 358 aa5.7□□□□□ -1.5
RFA1YAR007C PET122P10355 254 aa5.69□□□□□ -1.5
RFA1YAR007C CNA1P23287 553 aa5.69□□□□□ -1.5
RFA1YAR007C DGR2P32330 852 aa5.69□□□□□ -1.5
RFA1YAR007C RRN6P32786 894 aa5.69□□□□□ -1.5
RFA1YAR007C SEC6P32844 805 aa5.69□□□□□ -1.5
RFA1YAR007C SET3P36124 751 aa5.69□□□□□ -1.5
RFA1YAR007C NPT1P39683 429 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C YMR134WP40207 237 aa5.69□□□□□ -1.5
RFA1YAR007C MAM33P40513 266 aa5.69□□□□□ -1.5
RFA1YAR007C DIM1P41819 318 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C STB2P46679 850 aa5.69□□□□□ -1.5
RFA1YAR007C LIA1P47120 325 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C IMD4P50094 524 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C DAK1P54838 584 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C RIX7Q07844 837 aaKnown RBP5.69□□□□□ -1.5
RFA1YAR007C YPL260WQ08977 551 aa5.69□□□□□ -1.5
RFA1YAR007C YLR053CQ12026 108 aa5.69□□□□□ -1.5
RFA1YAR007C MED1Q12321 566 aa5.69□□□□□ -1.5
RFA1YAR007C FLO1P32768 1537 aa5.69□□□□□ -1.5
RFA1YAR007C MSS116P15424 664 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C PFK1P16861 987 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C SNT1P25357 1226 aa5.68□□□□□ -1.5
RFA1YAR007C ICL1P28240 557 aaPredicted RBP5.68□□□□□ -1.5
RFA1YAR007C RAD14P28519 371 aa5.68□□□□□ -1.5
RFA1YAR007C DBF4P32325 704 aa5.68□□□□□ -1.5
RFA1YAR007C UTP11P34247 250 aaPredicted RBP5.68□□□□□ -1.5
RFA1YAR007C ERC1P38767 581 aa5.68□□□□□ -1.5
RFA1YAR007C PCF11P39081 626 aaPredicted RBP5.68□□□□□ -1.5
RFA1YAR007C RSM26P47141 266 aa5.68□□□□□ -1.5
RFA1YAR007C FPK1P53739 893 aa5.68□□□□□ -1.5
RFA1YAR007C ESBP6P53918 673 aa5.68□□□□□ -1.5
RFA1YAR007C ADE12P80210 433 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C NOP12Q08208 459 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C YPR202WQ08993 238 aa5.68□□□□□ -1.5
RFA1YAR007C NYV1Q12255 253 aa5.68□□□□□ -1.5
RFA1YAR007C FIG2P25653 1609 aa5.68□□□□□ -1.5
RFA1YAR007C COBP00163 385 aa5.68□□□□□ -1.5
RFA1YAR007C TUB1P09733 447 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C HSF1P10961 833 aa5.68□□□□□ -1.5
RFA1YAR007C URE2P23202 354 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C BUD23P25627 275 aaPredicted RBP5.68□□□□□ -1.5
RFA1YAR007C MGT1P26188 188 aa5.68□□□□□ -1.5
RFA1YAR007C BRF1P29056 596 aa5.68□□□□□ -1.5
RFA1YAR007C PET112P33893 541 aa5.68□□□□□ -1.5
RFA1YAR007C CUE2P36075 443 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C SPC42P36094 363 aa5.68□□□□□ -1.5
RFA1YAR007C TSC10P38342 320 aa5.68□□□□□ -1.5
RFA1YAR007C GAA1P39012 614 aa5.68□□□□□ -1.5
RFA1YAR007C ICP55P40051 511 aa5.68□□□□□ -1.5
RFA1YAR007C PRK1P40494 810 aa5.68□□□□□ -1.5
RFA1YAR007C VMA10P48836 114 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C PIP2P52960 996 aa5.68□□□□□ -1.5
RFA1YAR007C YGR054WP53235 642 aaKnown RBP5.68□□□□□ -1.5
RFA1YAR007C ASI2P53895 289 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms