RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	UBS1	P38290	277 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	YHR078W	P38799	552 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	CCT3	P39077	534 aa	Known RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	GZF3	P42944	551 aa	Known RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	QRI7	P43122	407 aa		5.63	□□□□□ -1.51
ECM1	YAL059W	ISA1	Q07821	250 aa	Predicted RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	HSH49	Q99181	213 aa	Predicted RBP	5.63	□□□□□ -1.51
ECM1	YAL059W	PMA1	P05030	918 aa	Known RBP	5.62	□□□□□ -1.51
ECM1	YAL059W	NAT1	P12945	854 aa	Known RBP	5.62	□□□□□ -1.51
ECM1	YAL059W	PGS1	P25578	521 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	HEM12	P32347	362 aa	Predicted RBP	5.62	□□□□□ -1.51
ECM1	YAL059W	PSY4	P38193	441 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	BFA1	P47113	574 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	PHO23	P50947	330 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	SLU7	Q02775	382 aa	Known RBP	5.62	□□□□□ -1.51
ECM1	YAL059W	YLR287C	Q05881	355 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	BLS1	Q06071	122 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	RSC3	Q06639	885 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	SCM3	Q12334	223 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	LAS17	Q12446	633 aa		5.62	□□□□□ -1.51
ECM1	YAL059W	CAD1	P24813	409 aa	Known RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	SET5	P38890	526 aa	Known RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	EMP65	P40085	556 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	MNN11	P46985	422 aa	Known RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	HXT16	P47185	567 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	SLD3	P53135	668 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	RBG2	P53295	368 aa	Known RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	EIS1	Q05050	843 aa	Known RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	YDR286C	Q05530	114 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	ENB1	Q08299	606 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	GUP2	Q08929	609 aa		5.61	□□□□□ -1.51
ECM1	YAL059W	RRG1	Q12167	365 aa	Predicted RBP	5.61	□□□□□ -1.51
ECM1	YAL059W	TUB3	P09734	445 aa	Known RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	SPO16	P17122	198 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	SEC18	P18759	758 aa	Known RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	PET309	P32522	965 aa	Predicted RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	SRP72	P38688	640 aa	Known RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	POP2	P39008	433 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	SHR5	P41912	237 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	RET2	P43621	546 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	MRPL19	P53875	158 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	YDR341C	Q05506	607 aa	Known RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	RRP9	Q06506	573 aa	Known RBP	5.6	□□□□□ -1.51
ECM1	YAL059W	HIM1	Q06674	414 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	THI21	Q08975	551 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	NTO1	Q12311	748 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	SMC6	Q12749	1114 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	YBR182C-A	Q8TGU6	64 aa		5.6	□□□□□ -1.51
ECM1	YAL059W	DIF1	O13577	133 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	COX11	P19516	300 aa	Known RBP	5.59	□□□□□ -1.51
ECM1	YAL059W	MSH1	P25846	959 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	RAD16	P31244	790 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	DHR2	P36009	735 aa	Predicted RBP	5.59	□□□□□ -1.51
ECM1	YAL059W	MSS4	P38994	779 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	RAD26	P40352	1085 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	RLP7	P40693	322 aa	Known RBP	5.59	□□□□□ -1.51
ECM1	YAL059W	ALY2	P47029	1046 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	YGR153W	P48238	217 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	COG8	Q04632	607 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	GSF2	Q04697	403 aa	Known RBP	5.59	□□□□□ -1.51
ECM1	YAL059W	PEX19	Q07418	342 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	PGC1	Q08959	321 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	TAH18	Q12181	623 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	YOL114C	Q12322	202 aa		5.59	□□□□□ -1.51
ECM1	YAL059W	AAC3	P18238	307 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	CMK1	P27466	446 aa	Known RBP	5.58	□□□□□ -1.52
ECM1	YAL059W	MUD2	P36084	527 aa	Known RBP	5.58	□□□□□ -1.52
ECM1	YAL059W	DID4	P36108	232 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	PCM1	P38628	557 aa	Known RBP	5.58	□□□□□ -1.52
ECM1	YAL059W	NOP16	P40007	231 aa	Known RBP	5.58	□□□□□ -1.52
ECM1	YAL059W	JEM1	P40358	645 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	SSY5	P47002	699 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	YML6	P51998	286 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	ASI2	P53895	289 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	YNL058C	P53947	316 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	TIM50	Q02776	476 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	GRX3	Q03835	250 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	YKU80	Q04437	629 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	TDA9	Q04545	1251 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	YDR338C	Q05497	695 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	PEX15	Q08215	383 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	YPL191C	Q08930	360 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	SWM1	Q12379	170 aa		5.58	□□□□□ -1.52
ECM1	YAL059W	SES1	P07284	462 aa	Known RBP	5.57	□□□□□ -1.52
ECM1	YAL059W	GFA1	P14742	717 aa	Known RBP	5.57	□□□□□ -1.52
ECM1	YAL059W	PRP4	P20053	465 aa	Known RBP	5.57	□□□□□ -1.52
ECM1	YAL059W	DPH2	P32461	534 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	PAH1	P32567	862 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	YKU70	P32807	602 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	MCD4	P36051	919 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	LRP1	P38801	184 aa	Known RBP	5.57	□□□□□ -1.52
ECM1	YAL059W	BUL1	P48524	976 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	SKY1	Q03656	742 aa		5.57	□□□□□ -1.52
ECM1	YAL059W	SYF1	Q04048	859 aa	Predicted RBP	5.57	□□□□□ -1.52
ECM1	YAL059W	PMI40	P29952	429 aa	Known RBP	5.56	□□□□□ -1.52
ECM1	YAL059W	TRM2	P33753	639 aa		5.56	□□□□□ -1.52
ECM1	YAL059W	DEF1	P35732	738 aa	Known RBP	5.56	□□□□□ -1.52
ECM1	YAL059W	SAK1	P38990	1142 aa		5.56	□□□□□ -1.52
ECM1	YAL059W	KAP123	P40069	1113 aa	Known RBP	5.56	□□□□□ -1.52
ECM1	YAL059W	YIL166C	P40445	542 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms