RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ZFYP08048 801 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-230ENST00000634433 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 ZGPATQ8N5A5 531 aaKnown RBP8.52□□□□□ -1.05
BRCA1-230ENST00000634433 XAGE2Q96GT9 111 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 SERPINA10Q9UK55 444 aa8.52□□□□□ -1.05
BRCA1-230ENST00000634433 GOLIM4O00461 696 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 AK2P54819 239 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 ATP2B3Q16720 1220 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 ANKRD36CQ5JPF3 1778 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 RNF113AO15541 343 aaKnown RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 CAMTA2O94983 1202 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 BLOC1S2Q6QNY1 142 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 DDX46Q7L014 1031 aaKnown RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 EDC3Q96F86 508 aaKnown RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 ZNF512BQ96KM6 892 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 GREM2Q9H772 168 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 MROH5Q6ZUA9 1318 aa8.51□□□□□ -1.05
BRCA1-230ENST00000634433 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-230ENST00000634433 ITPK1Q13572 414 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 CCDC152Q4G0S7 254 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 ZSCAN25Q6NSZ9 544 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 DSCC1Q9BVC3 393 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 ISY1Q9ULR0 285 aaKnown RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 NUP98P52948 1817 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 UQCRFS1P1P0C7P4 283 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 TTF1Q15361 905 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 RC3H1Q5TC82 1133 aaKnown RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 SUSD4Q5VX71 490 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 UBN2Q6ZU65 1347 aa8.5□□□□□ -1.05
BRCA1-230ENST00000634433 ZNF589Q86UQ0 364 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 WDR33Q9C0J8 1336 aaKnown RBP8.5□□□□□ -1.05
BRCA1-230ENST00000634433 RPAP1Q9BWH6 1393 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 SYNE4Q8N205 404 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 SMC3Q9UQE7 1217 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 NIP7Q9Y221 180 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 QSER1Q2KHR3 1735 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 PDE8BO95263 885 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 RPS6KB1P23443 525 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-230ENST00000634433 ADCK5Q3MIX3 580 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 LPIN2Q92539 896 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 MPHOSPH8Q99549 860 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 CTNNA3Q9UI47 895 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
BRCA1-230ENST00000634433 RTL9Q8NET4 1388 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 COL24A1Q17RW2 1714 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 SLC5A1P13866 664 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 IGHMBP2P38935 993 aaKnown RBP8.48□□□□□ -1.05
BRCA1-230ENST00000634433 PUM3Q15397 648 aaKnown RBP8.48□□□□□ -1.05
BRCA1-230ENST00000634433 CHMP4CQ96CF2 233 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 NEK1Q96PY6 1258 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 ATP6V1DQ9Y5K8 247 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 MYH3P11055 1940 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 APBA3O96018 575 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 ADORA1P30542 326 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 KLHL40Q2TBA0 621 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 ZDHHC9Q9Y397 364 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
BRCA1-230ENST00000634433 PLSCR1O15162 318 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 NTSR2O95665 410 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-230ENST00000634433 VGLL2Q8N8G2 317 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 CDC5LQ99459 802 aaKnown RBP8.47□□□□□ -1.05
BRCA1-230ENST00000634433 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
BRCA1-230ENST00000634433 RIC1Q4ADV7 1423 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 PDCP20941 246 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 APPBP2Q92624 585 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 SEC62Q99442 399 aaKnown RBP8.47□□□□□ -1.05
BRCA1-230ENST00000634433 NYXQ9GZU5 481 aa8.47□□□□□ -1.05
BRCA1-230ENST00000634433 RPS6KA4O75676 772 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.05
BRCA1-230ENST00000634433 CPA1P15085 419 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-230ENST00000634433 ZAP70P43403 619 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 C1QTNF8P60827 252 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 PKP1Q13835 747 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 WASHC4Q2M389 1173 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 CCDC129Q6ZRS4 1044 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 NME8Q8N427 588 aa8.46□□□□□ -1.05
BRCA1-230ENST00000634433 FAM177BA6PVY3 158 aa8.46□□□□□ -1.06
BRCA1-230ENST00000634433 FGFR2P21802 821 aa8.46□□□□□ -1.06
BRCA1-230ENST00000634433 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.06
BRCA1-230ENST00000634433 CCDC83Q8IWF9 413 aa8.46□□□□□ -1.06
BRCA1-230ENST00000634433 LMBRD1Q9NUN5 540 aa8.46□□□□□ -1.06
BRCA1-230ENST00000634433 MAST3O60307 1309 aa8.45□□□□□ -1.06
BRCA1-230ENST00000634433 STX6O43752 255 aa8.45□□□□□ -1.06
BRCA1-230ENST00000634433 MBD3O95983 291 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms