RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 BORCS6Q96GS4 357 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 CDC5LQ99459 802 aaKnown RBP10.42□□□□□ -0.74
VPS11-206ENST00000614944 C16orf71Q8IYS4 520 aaPredicted RBP10.42□□□□□ -0.74
VPS11-206ENST00000614944 TRERF1Q96PN7 1200 aa10.42□□□□□ -0.74
VPS11-206ENST00000614944 IFIT2P09913 472 aaKnown RBP10.41□□□□□ -0.74
VPS11-206ENST00000614944 HMGN5P82970 282 aaKnown RBP10.41□□□□□ -0.74
VPS11-206ENST00000614944 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 EAF2Q96CJ1 260 aaPredicted RBP10.41□□□□□ -0.74
VPS11-206ENST00000614944 GREM2Q9H772 168 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 MCM5P33992 734 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 NFIXQ14938 502 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 DNAJC21Q5F1R6 531 aaKnown RBP10.41□□□□□ -0.74
VPS11-206ENST00000614944 TMC4Q7Z404 712 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 MYH7P12883 1935 aa10.41□□□□□ -0.74
VPS11-206ENST00000614944 HIP1O00291 1037 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 FGFR2P21802 821 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 BAG6P46379 1132 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 ZNF827Q17R98 1081 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 ERFEQ4G0M1 354 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 PNPLA7Q6ZV29 1317 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 SKAP1Q86WV1 359 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
VPS11-206ENST00000614944 AKAP11Q9UKA4 1901 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 SDSP20132 328 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 HOXA10P31260 410 aaPredicted RBP10.4□□□□□ -0.74
VPS11-206ENST00000614944 TFCP2Q12800 502 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 LRCH2Q5VUJ6 765 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 ARMCX6Q7L4S7 300 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 OTUD7AQ8TE49 926 aaPredicted RBP10.4□□□□□ -0.74
VPS11-206ENST00000614944 ITFG2Q969R8 447 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 PRIMPOLQ96LW4 560 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 RASSF4Q9H2L5 321 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 TMX1Q9H3N1 280 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 MED4Q9NPJ6 270 aa10.4□□□□□ -0.74
VPS11-206ENST00000614944 PDS5AQ29RF7 1337 aaKnown RBP10.4□□□□□ -0.75
VPS11-206ENST00000614944 POLRMTO00411 1230 aaKnown RBP10.4□□□□□ -0.75
VPS11-206ENST00000614944 AACSQ86V21 672 aa10.4□□□□□ -0.75
VPS11-206ENST00000614944 EVI5LQ96CN4 794 aa10.4□□□□□ -0.75
VPS11-206ENST00000614944 CEP126Q9P2H0 1117 aa10.4□□□□□ -0.75
VPS11-206ENST00000614944 MAST2Q6P0Q8 1798 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 RAD50Q92878 1312 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 GTF2F1P35269 517 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS11-206ENST00000614944 NLRP3Q96P20 1036 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 COL11A2P13942 1736 aaPredicted RBP10.39□□□□□ -0.75
VPS11-206ENST00000614944 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS11-206ENST00000614944 NASPP49321 788 aaPredicted RBP10.39□□□□□ -0.75
VPS11-206ENST00000614944 KCNQ4P56696 695 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 C15orf52Q6ZUT6 534 aaKnown RBP10.39□□□□□ -0.75
VPS11-206ENST00000614944 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 SLC16A10Q8TF71 515 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 ANTXR1Q9H6X2 564 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 SUFUQ9UMX1 484 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 COL4A1P02462 1669 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 PDE8BO95263 885 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 RBM25P49756 843 aaKnown RBP10.39□□□□□ -0.75
VPS11-206ENST00000614944 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 HAUS7Q99871 368 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 IL1RAPL2Q9NP60 686 aa10.39□□□□□ -0.75
VPS11-206ENST00000614944 IGHMBP2P38935 993 aaKnown RBP10.38□□□□□ -0.75
VPS11-206ENST00000614944 ST5P78524 1137 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 COL23A1Q86Y22 540 aaPredicted RBP10.38□□□□□ -0.75
VPS11-206ENST00000614944 JARID2Q92833 1246 aaPredicted RBP10.38□□□□□ -0.75
VPS11-206ENST00000614944 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 DBNLQ9UJU6 430 aaKnown RBP10.38□□□□□ -0.75
VPS11-206ENST00000614944 BIRC2Q13490 618 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
VPS11-206ENST00000614944 TERF2Q15554 542 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 RINLQ6ZS11 566 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 CRAMP1Q96RY5 1269 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
VPS11-206ENST00000614944 CCDC189A1A4V9 331 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 PPP1R12AO14974 1030 aaPredicted RBP10.37□□□□□ -0.75
VPS11-206ENST00000614944 LRRC24Q50LG9 513 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 PRR5LQ6MZQ0 368 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 LDHAL6AQ6ZMR3 332 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 SYNE4Q8N205 404 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 CNBD1Q8NA66 436 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 LPIN2Q92539 896 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 SF3B2Q13435 895 aaKnown RBP10.37□□□□□ -0.75
VPS11-206ENST00000614944 KLHDC4Q8TBB5 520 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
VPS11-206ENST00000614944 ANKRD2Q9GZV1 360 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 ERICH4A6NGS2 130 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 SERPINB2P05120 415 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 GAS2L3Q86XJ1 694 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 TSC1Q92574 1164 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 CXorf56Q9H5V9 222 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 TFCP2L1Q9NZI6 479 aa10.37□□□□□ -0.75
VPS11-206ENST00000614944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.37□□□□□ -0.75
VPS11-206ENST00000614944 HCLS1P14317 486 aaPredicted RBP10.36□□□□□ -0.75
VPS11-206ENST00000614944 MTA1Q13330 715 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 UBE4AQ14139 1066 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 TSHZ1Q6ZSZ6 1077 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 ANKRD18AQ8IVF6 992 aa10.36□□□□□ -0.75
VPS11-206ENST00000614944 BRIP1Q9BX63 1249 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms