RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TRIM27P14373 513 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 HUNKP57058 714 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 COL13A1Q5TAT6 717 aaPredicted RBP13.15□□□□□ -0.3
CCDC9-203ENST00000596938 IFFO2Q5TF58 517 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
CCDC9-203ENST00000596938 AIDAQ96BJ3 306 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
CCDC9-203ENST00000596938 FOXN1O15353 648 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 CIAO1O76071 339 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 FGFR2P21802 821 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 FKBP1BP68106 108 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
CCDC9-203ENST00000596938 DLGAP5Q15398 846 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 MEIS3Q99687 375 aa13.14□□□□□ -0.31
CCDC9-203ENST00000596938 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
CCDC9-203ENST00000596938 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
CCDC9-203ENST00000596938 CTCFP49711 727 aaPredicted RBP13.13□□□□□ -0.31
CCDC9-203ENST00000596938 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
CCDC9-203ENST00000596938 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
CCDC9-203ENST00000596938 COPRSQ9NQ92 184 aa13.13□□□□□ -0.31
CCDC9-203ENST00000596938 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
CCDC9-203ENST00000596938 AOC2O75106 756 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 BCAMP50895 628 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 NOGQ13253 232 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 GRM1Q13255 1194 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 MTX1Q13505 466 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 MFSD14BQ5SR56 506 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 RGMBQ6NW40 437 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
CCDC9-203ENST00000596938 LPIN2Q92539 896 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 PRDM10Q9NQV6 1147 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
CCDC9-203ENST00000596938 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
CCDC9-203ENST00000596938 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
CCDC9-203ENST00000596938 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
CCDC9-203ENST00000596938 CFAP100Q494V2 611 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 TBC1D22AQ8WUA7 517 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 PRMT6Q96LA8 375 aaPredicted RBP13.11□□□□□ -0.31
CCDC9-203ENST00000596938 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
CCDC9-203ENST00000596938 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 PSME4Q14997 1843 aa13.11□□□□□ -0.31
CCDC9-203ENST00000596938 MYO1BO43795 1136 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 FRAT2O75474 233 aaPredicted RBP13.1□□□□□ -0.31
CCDC9-203ENST00000596938 GNAI2P04899 355 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 SLC5A1P13866 664 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 ZNF157P51786 506 aaPredicted RBP13.1□□□□□ -0.31
CCDC9-203ENST00000596938 HDLBPQ00341 1268 aaKnown RBP13.1□□□□□ -0.31
CCDC9-203ENST00000596938 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 SIL1Q9H173 461 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 DEFB129Q9H1M3 183 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 TTF2Q9UNY4 1162 aaKnown RBP13.1□□□□□ -0.31
CCDC9-203ENST00000596938 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
CCDC9-203ENST00000596938 ZBTB22O15209 634 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 CA12O43570 354 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 NF2P35240 595 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 RBM5P52756 815 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC9-203ENST00000596938 IQSEC3Q9UPP2 1182 aaPredicted RBP13.09□□□□□ -0.31
CCDC9-203ENST00000596938 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 PPP2R3BQ9Y5P8 575 aa13.09□□□□□ -0.31
CCDC9-203ENST00000596938 TRPM7Q96QT4 1865 aa13.08□□□□□ -0.32
CCDC9-203ENST00000596938 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
CCDC9-203ENST00000596938 LBX1P52954 281 aa13.08□□□□□ -0.32
CCDC9-203ENST00000596938 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
CCDC9-203ENST00000596938 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
CCDC9-203ENST00000596938 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 SLC10A3P09131 477 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 CRKP46108 304 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
CCDC9-203ENST00000596938 ATP2B3Q16720 1220 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
CCDC9-203ENST00000596938 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
CCDC9-203ENST00000596938 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
CCDC9-203ENST00000596938 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
CCDC9-203ENST00000596938 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
CCDC9-203ENST00000596938 CLRN2A0PK11 232 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
CCDC9-203ENST00000596938 GRIK5Q16478 980 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 SUPT20HL1Q3ZLR7 823 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 LDLRAD1Q5T700 205 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 MOB2Q70IA6 237 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 ARMC9Q7Z3E5 817 aa13.06□□□□□ -0.32
CCDC9-203ENST00000596938 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
CCDC9-203ENST00000596938 COL1A1P02452 1464 aaPredicted RBP13.05□□□□□ -0.32
CCDC9-203ENST00000596938 UNCXA6NJT0 531 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms