RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
MBD3-206ENST00000589901 SUCLG2Q96I99 432 aa20.62■□□□□ 0.89
MBD3-206ENST00000589901 CNNM1Q9NRU3 951 aa20.62■□□□□ 0.89
MBD3-206ENST00000589901 ZNF521Q96K83 1311 aa20.61■□□□□ 0.89
MBD3-206ENST00000589901 RGS19P49795 217 aa20.61■□□□□ 0.89
MBD3-206ENST00000589901 PTPN12Q05209 780 aaKnown RBP20.61■□□□□ 0.89
MBD3-206ENST00000589901 MKRN3Q13064 507 aaKnown RBP20.61■□□□□ 0.89
MBD3-206ENST00000589901 KAZALD1Q96I82 304 aa20.61■□□□□ 0.89
MBD3-206ENST00000589901 FZD1Q9UP38 647 aa20.61■□□□□ 0.89
MBD3-206ENST00000589901 PUS3Q9BZE2 481 aaKnown RBP20.6■□□□□ 0.89
MBD3-206ENST00000589901 DEFB129Q9H1M3 183 aa20.6■□□□□ 0.89
MBD3-206ENST00000589901 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
MBD3-206ENST00000589901 MLLT1Q03111 559 aaPredicted RBP20.59■□□□□ 0.89
MBD3-206ENST00000589901 ARMC9Q7Z3E5 817 aa20.59■□□□□ 0.89
MBD3-206ENST00000589901 MTMR14Q8NCE2 650 aa20.59■□□□□ 0.89
MBD3-206ENST00000589901 AOX1Q06278 1338 aa20.58■□□□□ 0.89
MBD3-206ENST00000589901 CLRN2A0PK11 232 aa20.58■□□□□ 0.89
MBD3-206ENST00000589901 CFAP100Q494V2 611 aa20.58■□□□□ 0.89
MBD3-206ENST00000589901 PRMT6Q96LA8 375 aaPredicted RBP20.58■□□□□ 0.89
MBD3-206ENST00000589901 ANGEL1Q9UNK9 670 aaKnown RBP20.58■□□□□ 0.89
MBD3-206ENST00000589901 SPDYE2BA6NHP3 402 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 TBC1D8O95759 1140 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 SPDYE6P0CI01 402 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 TM4SF4P48230 202 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 FKBP1AP62942 108 aaKnown RBP20.57■□□□□ 0.88
MBD3-206ENST00000589901 LDLRAD1Q5T700 205 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
MBD3-206ENST00000589901 A0A1B0GUL6 1792 aa20.57■□□□□ 0.88
MBD3-206ENST00000589901 GYG1P46976 350 aa20.56■□□□□ 0.88
MBD3-206ENST00000589901 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
MBD3-206ENST00000589901 CTU1Q7Z7A3 348 aaKnown RBP20.56■□□□□ 0.88
MBD3-206ENST00000589901 BICC1Q9H694 974 aaKnown RBP20.56■□□□□ 0.88
MBD3-206ENST00000589901 UTYO14607 1347 aa20.55■□□□□ 0.88
MBD3-206ENST00000589901 AKAP11Q9UKA4 1901 aa20.55■□□□□ 0.88
MBD3-206ENST00000589901 RBM5P52756 815 aaKnown RBP eCLIP20.55■□□□□ 0.88
MBD3-206ENST00000589901 TDRD7Q8NHU6 1098 aaKnown RBP20.55■□□□□ 0.88
MBD3-206ENST00000589901 VEZTQ9HBM0 779 aa20.55■□□□□ 0.88
MBD3-206ENST00000589901 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
MBD3-206ENST00000589901 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
MBD3-206ENST00000589901 COL1A1P02452 1464 aaPredicted RBP20.55■□□□□ 0.88
MBD3-206ENST00000589901 FAM205AQ6ZU69 1335 aa20.54■□□□□ 0.88
MBD3-206ENST00000589901 MYO1BO43795 1136 aa20.54■□□□□ 0.88
MBD3-206ENST00000589901 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
MBD3-206ENST00000589901 SPRYD7Q5W111 196 aa20.54■□□□□ 0.88
MBD3-206ENST00000589901 ZNF296Q8WUU4 475 aaPredicted RBP20.54■□□□□ 0.88
MBD3-206ENST00000589901 FAM84BQ96KN1 310 aaPredicted RBP20.54■□□□□ 0.88
MBD3-206ENST00000589901 SSC5DA1L4H1 1573 aa20.54■□□□□ 0.88
MBD3-206ENST00000589901 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
MBD3-206ENST00000589901 MFSD14BQ5SR56 506 aa20.53■□□□□ 0.88
MBD3-206ENST00000589901 ANKRD44Q8N8A2 993 aa20.53■□□□□ 0.88
MBD3-206ENST00000589901 PPP2R3BQ9Y5P8 575 aa20.53■□□□□ 0.88
MBD3-206ENST00000589901 SREBF2Q12772 1141 aa20.52■□□□□ 0.88
MBD3-206ENST00000589901 LRRC24Q50LG9 513 aa20.52■□□□□ 0.88
MBD3-206ENST00000589901 NBPF12Q5TAG4 269 aaPredicted RBP20.52■□□□□ 0.88
MBD3-206ENST00000589901 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
MBD3-206ENST00000589901 CLMNQ96JQ2 1002 aa20.52■□□□□ 0.88
MBD3-206ENST00000589901 TNRC18O15417 2968 aaPredicted RBP20.52■□□□□ 0.87
MBD3-206ENST00000589901 MROH5Q6ZUA9 1318 aa20.52■□□□□ 0.87
MBD3-206ENST00000589901 PPP1R12BO60237 982 aaPredicted RBP20.51■□□□□ 0.87
MBD3-206ENST00000589901 RASA3Q14644 834 aa20.51■□□□□ 0.87
MBD3-206ENST00000589901 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
MBD3-206ENST00000589901 SLC10A4Q96EP9 437 aa20.51■□□□□ 0.87
MBD3-206ENST00000589901 R3HDMLQ9H3Y0 253 aa20.51■□□□□ 0.87
MBD3-206ENST00000589901 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
MBD3-206ENST00000589901 PTPRCP08575 1304 aa20.51■□□□□ 0.87
MBD3-206ENST00000589901 E9PSI1 815 aa20.5■□□□□ 0.87
MBD3-206ENST00000589901 GPR25O00155 361 aa20.5■□□□□ 0.87
MBD3-206ENST00000589901 SOX10P56693 466 aa20.5■□□□□ 0.87
MBD3-206ENST00000589901 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
MBD3-206ENST00000589901 IQSEC3Q9UPP2 1182 aaPredicted RBP20.5■□□□□ 0.87
MBD3-206ENST00000589901 GRIK5Q16478 980 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 METTL24Q5JXM2 366 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 FBXO33Q7Z6M2 555 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 KLHDC4Q8TBB5 520 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 USP44Q9H0E7 712 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 TDRD3Q9H7E2 651 aaKnown RBP20.49■□□□□ 0.87
MBD3-206ENST00000589901 ZNF70Q9UC06 446 aaPredicted RBP20.49■□□□□ 0.87
MBD3-206ENST00000589901 SERPINA10Q9UK55 444 aa20.49■□□□□ 0.87
MBD3-206ENST00000589901 USP2O75604 605 aaPredicted RBP20.48■□□□□ 0.87
MBD3-206ENST00000589901 SLFN5Q08AF3 891 aa20.48■□□□□ 0.87
MBD3-206ENST00000589901 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
MBD3-206ENST00000589901 VPS37DQ86XT2 251 aa20.48■□□□□ 0.87
MBD3-206ENST00000589901 WNK4Q96J92 1243 aa20.48■□□□□ 0.87
MBD3-206ENST00000589901 HPS5Q9UPZ3 1129 aa20.48■□□□□ 0.87
MBD3-206ENST00000589901 CHAF1AQ13111 956 aaPredicted RBP20.47■□□□□ 0.87
MBD3-206ENST00000589901 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
MBD3-206ENST00000589901 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
MBD3-206ENST00000589901 VGLL2Q8N8G2 317 aa20.47■□□□□ 0.87
MBD3-206ENST00000589901 CDCA7LQ96GN5 454 aa20.47■□□□□ 0.87
MBD3-206ENST00000589901 CFHR5Q9BXR6 569 aa20.47■□□□□ 0.87
MBD3-206ENST00000589901 MANSC4A6NHS7 340 aaPredicted RBP20.46■□□□□ 0.87
MBD3-206ENST00000589901 PDE8BO95263 885 aa20.46■□□□□ 0.87
MBD3-206ENST00000589901 ZBTB48P10074 688 aaPredicted RBP20.46■□□□□ 0.87
MBD3-206ENST00000589901 CRKP46108 304 aa20.46■□□□□ 0.87
MBD3-206ENST00000589901 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
MBD3-206ENST00000589901 IFNL1Q8IU54 200 aa20.46■□□□□ 0.87
MBD3-206ENST00000589901 CDAN1Q8IWY9 1227 aa20.46■□□□□ 0.87
MBD3-206ENST00000589901 GJA5P36382 358 aa20.45■□□□□ 0.86
MBD3-206ENST00000589901 BCAMP50895 628 aa20.45■□□□□ 0.86
MBD3-206ENST00000589901 INHBEP58166 350 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms