RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 VGLL2Q8N8G2 317 aa20.73■□□□□ 0.91
SREBF1-219ENST00000580540 PA2G4Q9UQ80 394 aaKnown RBP20.73■□□□□ 0.91
SREBF1-219ENST00000580540 IFIT1P09914 478 aaKnown RBP20.72■□□□□ 0.91
SREBF1-219ENST00000580540 PUM3Q15397 648 aaKnown RBP20.72■□□□□ 0.91
SREBF1-219ENST00000580540 TDRD7Q8NHU6 1098 aaKnown RBP20.72■□□□□ 0.91
SREBF1-219ENST00000580540 TLL2Q9Y6L7 1015 aa20.72■□□□□ 0.91
SREBF1-219ENST00000580540 WNT10BO00744 389 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 SRGAP3O43295 1099 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 GNAI2P04899 355 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 CHAF1AQ13111 956 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-219ENST00000580540 ATG9AQ7Z3C6 839 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 FBXO33Q7Z6M2 555 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 CEP126Q9P2H0 1117 aa20.71■□□□□ 0.91
SREBF1-219ENST00000580540 ZNF646O15015 1829 aaPredicted RBP20.7■□□□□ 0.9
SREBF1-219ENST00000580540 HSPA1AP0DMV8 641 aaKnown RBP20.7■□□□□ 0.9
SREBF1-219ENST00000580540 HSPA1BP0DMV9 641 aaKnown RBP20.7■□□□□ 0.9
SREBF1-219ENST00000580540 SLC5A1P13866 664 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 MMP14P50281 582 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 BCAMP50895 628 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 DLGAP5Q15398 846 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 CYP4F22Q6NT55 531 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 DZIP1LQ8IYY4 767 aaKnown RBP20.7■□□□□ 0.9
SREBF1-219ENST00000580540 CAPNS2Q96L46 248 aa20.7■□□□□ 0.9
SREBF1-219ENST00000580540 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
SREBF1-219ENST00000580540 CIAO1O76071 339 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 RBM5P52756 815 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■□□□□ 9.6
SREBF1-219ENST00000580540 FKBP1AP62942 108 aaKnown RBP20.69■□□□□ 0.9
SREBF1-219ENST00000580540 MFSD14BQ5SR56 506 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 SAPCD2Q86UD0 394 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 C2orf69Q8N8R5 385 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 CDCA5Q96FF9 252 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 FBXO3Q9UK99 471 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 FAM205AQ6ZU69 1335 aa20.69■□□□□ 0.9
SREBF1-219ENST00000580540 FGFR2P21802 821 aa20.68■□□□□ 0.9
SREBF1-219ENST00000580540 IL15P40933 162 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-219ENST00000580540 ECE1P42892 770 aa20.68■□□□□ 0.9
SREBF1-219ENST00000580540 HUNKP57058 714 aa20.68■□□□□ 0.9
SREBF1-219ENST00000580540 LPIN2Q92539 896 aa20.68■□□□□ 0.9
SREBF1-219ENST00000580540 GBA2Q9HCG7 927 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-219ENST00000580540 COPRSQ9NQ92 184 aa20.68■□□□□ 0.9
SREBF1-219ENST00000580540 ATP2B3Q16720 1220 aa20.67■□□□□ 0.9
SREBF1-219ENST00000580540 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
SREBF1-219ENST00000580540 PRAMEF18Q5VWM3 479 aa20.67■□□□□ 0.9
SREBF1-219ENST00000580540 PITPNM2Q9BZ72 1349 aa20.67■□□□□ 0.9
SREBF1-219ENST00000580540 RLBP1P12271 317 aa20.66■□□□□ 0.9
SREBF1-219ENST00000580540 TTF2Q9UNY4 1162 aaKnown RBP20.66■□□□□ 0.9
SREBF1-219ENST00000580540 PCDHAC2Q9Y5I4 1007 aa20.66■□□□□ 0.9
SREBF1-219ENST00000580540 AOC2O75106 756 aa20.64■□□□□ 0.89
SREBF1-219ENST00000580540 MTX1Q13505 466 aa20.64■□□□□ 0.89
SREBF1-219ENST00000580540 PANK1Q8TE04 598 aa20.64■□□□□ 0.89
SREBF1-219ENST00000580540 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
SREBF1-219ENST00000580540 ZBED3Q96IU2 234 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-219ENST00000580540 C1orf115Q9H7X2 142 aa20.64■□□□□ 0.89
SREBF1-219ENST00000580540 PCNTO95613 3336 aa20.63■□□□□ 0.89
SREBF1-219ENST00000580540 PNMA6EA0A0J9YXQ4 647 aa20.63■□□□□ 0.89
SREBF1-219ENST00000580540 CLRN2A0PK11 232 aa20.63■□□□□ 0.89
SREBF1-219ENST00000580540 MYO1BO43795 1136 aa20.63■□□□□ 0.89
SREBF1-219ENST00000580540 APOBEC3FQ8IUX4 373 aaKnown RBP20.63■□□□□ 0.89
SREBF1-219ENST00000580540 PRMT6Q96LA8 375 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-219ENST00000580540 VEZTQ9HBM0 779 aa20.63■□□□□ 0.89
SREBF1-219ENST00000580540 SPDYE2BA6NHP3 402 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 SPDYE6P0CI01 402 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 TFCP2Q12800 502 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 G3BP1Q13283 466 aaKnown RBP eCLIP20.62■□□□□ 0.89
SREBF1-219ENST00000580540 TTLL12Q14166 644 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-219ENST00000580540 GRIK5Q16478 980 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 MTMR14Q8NCE2 650 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 TBC1D22AQ8WUA7 517 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 HHIPL1Q96JK4 782 aa20.62■□□□□ 0.89
SREBF1-219ENST00000580540 TIMM10P62072 90 aa20.61■□□□□ 0.89
SREBF1-219ENST00000580540 GNL3LQ9NVN8 582 aaKnown RBP20.61■□□□□ 0.89
SREBF1-219ENST00000580540 ADORA1P30542 326 aa20.6■□□□□ 0.89
SREBF1-219ENST00000580540 NF2P35240 595 aa20.6■□□□□ 0.89
SREBF1-219ENST00000580540 ZNF157P51786 506 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-219ENST00000580540 MAP2K1Q02750 393 aaPredicted RBP20.6■□□□□ 0.89
SREBF1-219ENST00000580540 RGMBQ6NW40 437 aa20.6■□□□□ 0.89
SREBF1-219ENST00000580540 RCAN3Q9UKA8 241 aa20.6■□□□□ 0.89
SREBF1-219ENST00000580540 AOX1Q06278 1338 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 ZBTB7BO15156 539 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-219ENST00000580540 FOXN1O15353 648 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 MS4A1P11836 297 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 CRKP46108 304 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 PRKG1Q13976 671 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 MOB2Q70IA6 237 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 NEUROD6Q96NK8 337 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 BEGAINQ9BUH8 593 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 DEFB129Q9H1M3 183 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 WBP1LQ9NX94 342 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 SERPINA10Q9UK55 444 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 AKAP2Q9Y2D5 859 aa20.59■□□□□ 0.89
SREBF1-219ENST00000580540 UBE2Q2LH0YL09 131 aa20.58■□□□□ 0.89
SREBF1-219ENST00000580540 MAP2K2P36507 400 aa20.58■□□□□ 0.89
SREBF1-219ENST00000580540 PHKA1P46020 1223 aa20.58■□□□□ 0.89
SREBF1-219ENST00000580540 ATP8B2P98198 1209 aa20.58■□□□□ 0.89
SREBF1-219ENST00000580540 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-219ENST00000580540 WDR66Q8TBY9 1149 aa20.58■□□□□ 0.89
SREBF1-219ENST00000580540 TDRD3Q9H7E2 651 aaKnown RBP20.58■□□□□ 0.89
SREBF1-219ENST00000580540 A0A1B0GUL7 405 aa20.57■□□□□ 0.88
SREBF1-219ENST00000580540 FKBP1BP68106 108 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms