RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	FTSJ3	Q8IY81	847 aa	Known RBP	13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CERS5	Q8N5B7	392 aa		13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	TMEM57	Q8N5G2	664 aa		13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	TDRD7	Q8NHU6	1098 aa	Known RBP	13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	SIL1	Q9H173	461 aa		13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	JAG2	Q9Y219	1238 aa		13.63	□□□□□ -0.23
PPP4R1-208	ENST00000578178	SASH1	O94885	1247 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	IFIT1	P09914	478 aa	Known RBP	13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	HSPA1A	P0DMV8	641 aa	Known RBP	13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	HSPA1B	P0DMV9	641 aa	Known RBP	13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	FGFR2	P21802	821 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	MTX1	Q13505	466 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	NBPF9	Q3BBW0	867 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CAVIN4	Q5BKX8	364 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	ATG9A	Q7Z3C6	839 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	SAPCD2	Q86UD0	394 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	COPRS	Q9NQ92	184 aa		13.62	□□□□□ -0.23
PPP4R1-208	ENST00000578178	PAPPA2	Q9BXP8	1791 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	SRGAP3	O43295	1099 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	GNAI2	P04899	355 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	SLC5A1	P13866	664 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	ECE1	P42892	770 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	MFSD14B	Q5SR56	506 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	DLK2	Q6UY11	383 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	FBXO33	Q7Z6M2	555 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	DZIP1L	Q8IYY4	767 aa	Known RBP	13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CDCA5	Q96FF9	252 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	PA2G4	Q9UQ80	394 aa	Known RBP	13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	PCNT	O95613	3336 aa		13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	WDR33	Q9C0J8	1336 aa	Known RBP	13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178	COL1A1	P02452	1464 aa	Predicted RBP	13.61	□□□□□ -0.23
PPP4R1-208	ENST00000578178		F8W031	263 aa	Predicted RBP	13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	IL15	P40933	162 aa	Predicted RBP	13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	MTMR14	Q8NCE2	650 aa		13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	LPIN2	Q92539	896 aa		13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	ZBED3	Q96IU2	234 aa	Predicted RBP	13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	HHIPL1	Q96JK4	782 aa		13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CAPNS2	Q96L46	248 aa		13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	GBA2	Q9HCG7	927 aa	Predicted RBP	13.6	□□□□□ -0.23
PPP4R1-208	ENST00000578178	FRAT2	O75474	233 aa	Predicted RBP	13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	DLGAP5	Q15398	846 aa		13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	ATP2B3	Q16720	1220 aa		13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CYP4F22	Q6NT55	531 aa		13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	ITPRIP	Q8IWB1	547 aa		13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	CEP126	Q9P2H0	1117 aa		13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.59	□□□□□ -0.23
PPP4R1-208	ENST00000578178	RLBP1	P12271	317 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	BCAM	P50895	628 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	HUNK	P57058	714 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	CHAF1A	Q13111	956 aa	Predicted RBP	13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	GRM1	Q13255	1194 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	CFAP100	Q494V2	611 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	C2orf69	Q8N8R5	385 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	TBC1D22A	Q8WUA7	517 aa		13.58	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SPDYE2B	A6NHP3	402 aa		13.57	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SPDYE6	P0CI01	402 aa		13.57	□□□□□ -0.24
PPP4R1-208	ENST00000578178	TTF2	Q9UNY4	1162 aa	Known RBP	13.57	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SCAF8	Q9UPN6	1271 aa	Known RBP	13.57	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PNMA6E	A0A0J9YXQ4	647 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	MYO1B	O43795	1136 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	FKBP1B	P68106	108 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	AIDA	Q96BJ3	306 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SERPINA10	Q9UK55	444 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PCDHAC2	Q9Y5I4	1007 aa		13.56	□□□□□ -0.24
PPP4R1-208	ENST00000578178	NF2	P35240	595 aa		13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	RBM5	P52756	815 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	MAP2K1	Q02750	393 aa	Predicted RBP	13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	C1orf115	Q9H7X2	142 aa		13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	GNL3L	Q9NVN8	582 aa	Known RBP	13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	WBP1L	Q9NX94	342 aa		13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PPP2R3B	Q9Y5P8	575 aa		13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	MAST3	O60307	1309 aa		13.55	□□□□□ -0.24
PPP4R1-208	ENST00000578178	CLRN2	A0PK11	232 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	ZBTB7B	O15156	539 aa	Predicted RBP	13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	AOC2	O75106	756 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	MS4A1	P11836	297 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	MAP2K2	P36507	400 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	CRK	P46108	304 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	TFCP2	Q12800	502 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	GRIK5	Q16478	980 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PRAMEF18	Q5VWM3	479 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	RGMB	Q6NW40	437 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	WDR66	Q8TBY9	1149 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PANK1	Q8TE04	598 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PRMT6	Q96LA8	375 aa	Predicted RBP	13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	VEZT	Q9HBM0	779 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	RCAN3	Q9UKA8	241 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	AKAP2	Q9Y2D5	859 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SUGT1	Q9Y2Z0	365 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178	AOX1	Q06278	1338 aa		13.54	□□□□□ -0.24
PPP4R1-208	ENST00000578178		A0A1B0GUL7	405 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	SEMA3E	O15041	775 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	ZBTB22	O15209	634 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	FOXN1	O15353	648 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	ADORA1	P30542	326 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	PHKA1	P46020	1223 aa		13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	HDLBP	Q00341	1268 aa	Known RBP	13.53	□□□□□ -0.24
PPP4R1-208	ENST00000578178	NOG	Q13253	232 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms