RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 OATP04181 439 aa12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 PRSS12P56730 875 aa12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
TOM1L1-223ENST00000576932 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 IRF6O14896 467 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 ECE2O60344 883 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 FKTNO75072 461 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 PACS2Q86VP3 889 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 AGBL3Q8NEM8 1001 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
TOM1L1-223ENST00000576932 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 POLLQ9UGP5 575 aa12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 CENPFP49454 3210 aa12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 RBBP6Q7Z6E9 1792 aaKnown RBP12.15□□□□□ -0.46
TOM1L1-223ENST00000576932 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 NEFMP07197 916 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 SCARF1Q14162 830 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 BRCA2P51587 3418 aa12.14□□□□□ -0.47
TOM1L1-223ENST00000576932 ASTN2O75129 1339 aaPredicted RBP12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 TAF1P21675 1872 aa12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 SCN9AQ15858 1988 aa12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 RSBN1LQ6PCB5 846 aaPredicted RBP12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 TBC1D16Q8TBP0 767 aa12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 ZC3H12CQ9C0D7 883 aaKnown RBP12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
TOM1L1-223ENST00000576932 PSME4Q14997 1843 aa12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 GPSM2P81274 684 aa12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 CELF1Q92879 486 aaKnown RBP12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 MYOZ2Q9NPC6 264 aa12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 KIAA0100Q14667 2235 aaKnown RBP12.12□□□□□ -0.47
TOM1L1-223ENST00000576932 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 NF2P35240 595 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 GMLQ99445 158 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
TOM1L1-223ENST00000576932 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
TOM1L1-223ENST00000576932 MMP14P50281 582 aa12.1□□□□□ -0.47
TOM1L1-223ENST00000576932 INHBEP58166 350 aa12.1□□□□□ -0.47
TOM1L1-223ENST00000576932 PROSER3Q2NL68 480 aa12.1□□□□□ -0.47
TOM1L1-223ENST00000576932 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
TOM1L1-223ENST00000576932 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 OTOP1Q7RTM1 612 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
TOM1L1-223ENST00000576932 SZT2Q5T011 3432 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 TRIM6-TRIM34B2RNG4 842 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 TRIM66O15016 1216 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 PLEKHF1Q96S99 279 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
TOM1L1-223ENST00000576932 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 MANSC4A6NHS7 340 aaPredicted RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 UFL1O94874 794 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 ANXA1P04083 346 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 HSP90B1P14625 803 aaKnown RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 COL9A1P20849 921 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 SLC4A3P48751 1232 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 CNGB1Q14028 1251 aaPredicted RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 TTLL12Q14166 644 aaPredicted RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 SPRYD7Q5W111 196 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 ERO1AQ96HE7 468 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 ISCA1Q9BUE6 129 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 PTPN22Q9Y2R2 807 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 LAMB1P07942 1786 aa12.07□□□□□ -0.48
TOM1L1-223ENST00000576932 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
TOM1L1-223ENST00000576932 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms