RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TLR2O60603 784 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 HOXD10P28358 340 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 IGHMBP2P38935 993 aaKnown RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 GJA8P48165 433 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 CTSWP56202 376 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 RIPK4P57078 832 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 UBXN2AP68543 259 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 GTF2IP78347 998 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 LACTBP83111 547 aaPredicted RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 MTMR14Q8NCE2 650 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 RAET1EQ8TD07 263 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 BRI3BPQ8WY22 251 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 LRCH3Q96II8 777 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 ZCCHC17Q9NP64 241 aaKnown RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 CWC25Q9NXE8 425 aaPredicted RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 MINPP1Q9UNW1 487 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 CSADQ9Y600 493 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 COL6A3P12111 3177 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 TRIOBPQ9H2D6 2365 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 KIAA0100Q14667 2235 aaKnown RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 LAMA3Q16787 3333 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 SPDYE2BA6NHP3 402 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 SOX1O00570 391 aaPredicted RBP7.62□□□□□ -1.19
SMG6-219ENST00000575663 USP2O75604 605 aaPredicted RBP7.62□□□□□ -1.19
SMG6-219ENST00000575663 FARP2O94887 1054 aaPredicted RBP7.62□□□□□ -1.19
SMG6-219ENST00000575663 GJB1P08034 283 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 SPDYE6P0CI01 402 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 GRK4P32298 578 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 KCNJ4P48050 445 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 MTFR1Q15390 333 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 CFAP100Q494V2 611 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 NBPF12Q5TAG4 269 aaPredicted RBP7.62□□□□□ -1.19
SMG6-219ENST00000575663 HELBQ8NG08 1087 aaPredicted RBP7.62□□□□□ -1.19
SMG6-219ENST00000575663 MS4A4AQ96JQ5 239 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 MYD88Q99836 296 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 DLG5Q8TDM6 1919 aa7.62□□□□□ -1.19
SMG6-219ENST00000575663 DDX58O95786 925 aaKnown RBP7.61□□□□□ -1.19
SMG6-219ENST00000575663 CETPP11597 493 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 CAPN2P17655 700 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 RBM5P52756 815 aaKnown RBP eCLIP7.61□□□□□ -1.19
SMG6-219ENST00000575663 VGLL4Q14135 290 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 RASA3Q14644 834 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 KRT24Q2M2I5 525 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 UBE2Q1Q7Z7E8 422 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 FAM43AQ8N2R8 423 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 DEFB123Q8N688 67 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 TRIM47Q96LD4 638 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 ARHGAP39Q9C0H5 1083 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 ANKRD2Q9GZV1 360 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 RNF208Q9H0X6 261 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 BIN2Q9UBW5 565 aaPredicted RBP7.61□□□□□ -1.19
SMG6-219ENST00000575663 SRRDQ9UH36 339 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 RIPOR2Q9Y4F9 1068 aa7.61□□□□□ -1.19
SMG6-219ENST00000575663 LAS1LQ9Y4W2 734 aaKnown RBP7.61□□□□□ -1.19
SMG6-219ENST00000575663 MYPNQ86TC9 1320 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 F8W031 263 aaPredicted RBP7.6□□□□□ -1.19
SMG6-219ENST00000575663 CHL1O00533 1208 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 FMNL1O95466 1100 aaPredicted RBP7.6□□□□□ -1.19
SMG6-219ENST00000575663 CCL5P13501 91 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 TNNI2P48788 182 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 SLAIN1Q8ND83 568 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 U2AF1L4Q8WU68 220 aaKnown RBP7.6□□□□□ -1.19
SMG6-219ENST00000575663 COL25A1Q9BXS0 654 aaPredicted RBP7.6□□□□□ -1.19
SMG6-219ENST00000575663 GREM2Q9H772 168 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 A0A0C4DFX4 3053 aa7.6□□□□□ -1.19
SMG6-219ENST00000575663 ZNF646O15015 1829 aaPredicted RBP7.59□□□□□ -1.19
SMG6-219ENST00000575663 SPDYE5A6NIY4 337 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 BTBD19C9JJ37 291 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 OSBPP22059 807 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 TMPOP42166 694 aaKnown RBP7.59□□□□□ -1.19
SMG6-219ENST00000575663 PSMC4P43686 418 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 FKBP1AP62942 108 aaKnown RBP7.59□□□□□ -1.19
SMG6-219ENST00000575663 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.59□□□□□ -1.19
SMG6-219ENST00000575663 ZNF804AQ7Z570 1209 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 TXNRD3Q86VQ6 643 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMG6-219ENST00000575663 TTLL11Q8NHH1 800 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.59□□□□□ -1.19
SMG6-219ENST00000575663 CNKSR2Q8WXI2 1034 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 MPHOSPH8Q99549 860 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 CD209Q9NNX6 404 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 STAP2Q9UGK3 403 aa7.59□□□□□ -1.19
SMG6-219ENST00000575663 ECM2O94769 699 aaPredicted RBP7.58□□□□□ -1.2
SMG6-219ENST00000575663 KLRK1P26718 216 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 BMP8BP34820 402 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 FCGRTP55899 365 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 NEXNQ0ZGT2 675 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 LRIT3Q3SXY7 679 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 SPDYE2Q495Y8 402 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 DUSP27Q5VZP5 1158 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 ERO1BQ86YB8 467 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 CERS5Q8N5B7 392 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
SMG6-219ENST00000575663 HOOK2Q96ED9 719 aa7.58□□□□□ -1.2
SMG6-219ENST00000575663 PRMT6Q96LA8 375 aaPredicted RBP7.58□□□□□ -1.2
SMG6-219ENST00000575663 METTL22Q9BUU2 404 aaPredicted RBP7.58□□□□□ -1.2
SMG6-219ENST00000575663 PCDHAC2Q9Y5I4 1007 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 336.1 ms