RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
SHMT2-211ENST00000554310 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
SHMT2-211ENST00000554310 SCARF1Q14162 830 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
SHMT2-211ENST00000554310 CST9Q5W186 159 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 USP48Q86UV5 1035 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 CERS5Q8N5B7 392 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 SIL1Q9H173 461 aa16.26■□□□□ 0.19
SHMT2-211ENST00000554310 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-211ENST00000554310 ADM5C9JUS6 153 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 SRGAP3O43295 1099 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 SLC5A1P13866 664 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 FGFR2P21802 821 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 IL15P40933 162 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-211ENST00000554310 LPIN2Q92539 896 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
SHMT2-211ENST00000554310 WNT10BO00744 389 aa16.24■□□□□ 0.19
SHMT2-211ENST00000554310 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
SHMT2-211ENST00000554310 FBXO33Q7Z6M2 555 aa16.24■□□□□ 0.19
SHMT2-211ENST00000554310 ZNF408Q9H9D4 720 aa16.24■□□□□ 0.19
SHMT2-211ENST00000554310 ATP2B3Q16720 1220 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 MFSD14BQ5SR56 506 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 PA2G4Q9UQ80 394 aaKnown RBP16.23■□□□□ 0.19
SHMT2-211ENST00000554310 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
SHMT2-211ENST00000554310 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-211ENST00000554310 MS4A1P11836 297 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 RLBP1P12271 317 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 VEGFBP49765 207 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 MTMR14Q8NCE2 650 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 TBC1D22AQ8WUA7 517 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 ZBED3Q96IU2 234 aaPredicted RBP16.22■□□□□ 0.19
SHMT2-211ENST00000554310 HHIPL1Q96JK4 782 aa16.22■□□□□ 0.19
SHMT2-211ENST00000554310 PCNTO95613 3336 aa16.21■□□□□ 0.19
SHMT2-211ENST00000554310 PAPPA2Q9BXP8 1791 aa16.21■□□□□ 0.19
SHMT2-211ENST00000554310 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-211ENST00000554310 ECE1P42892 770 aa16.21■□□□□ 0.19
SHMT2-211ENST00000554310 DLGAP5Q15398 846 aa16.21■□□□□ 0.19
SHMT2-211ENST00000554310 APOBEC3FQ8IUX4 373 aaKnown RBP16.21■□□□□ 0.19
SHMT2-211ENST00000554310 CDCA5Q96FF9 252 aa16.21■□□□□ 0.19
SHMT2-211ENST00000554310 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-211ENST00000554310 BCAMP50895 628 aa16.2■□□□□ 0.18
SHMT2-211ENST00000554310 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-211ENST00000554310 GBA2Q9HCG7 927 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-211ENST00000554310 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
SHMT2-211ENST00000554310 IQSEC3Q9UPP2 1182 aaPredicted RBP16.2■□□□□ 0.18
SHMT2-211ENST00000554310 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
SHMT2-211ENST00000554310 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 SPDYE2BA6NHP3 402 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 MYO1BO43795 1136 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 SPDYE6P0CI01 402 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-211ENST00000554310 CFAP100Q494V2 611 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 DLK2Q6UY11 383 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 CAPNS2Q96L46 248 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 SERPINA10Q9UK55 444 aa16.19■□□□□ 0.18
SHMT2-211ENST00000554310 TTF2Q9UNY4 1162 aaKnown RBP16.19■□□□□ 0.18
SHMT2-211ENST00000554310 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-211ENST00000554310 ZBTB22O15209 634 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 HUNKP57058 714 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 FKBP1BP68106 108 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
SHMT2-211ENST00000554310 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 MAST3O60307 1309 aa16.18■□□□□ 0.18
SHMT2-211ENST00000554310 SEMA3EO15041 775 aa16.17■□□□□ 0.18
SHMT2-211ENST00000554310 HSPA1AP0DMV8 641 aaKnown RBP16.17■□□□□ 0.18
SHMT2-211ENST00000554310 HSPA1BP0DMV9 641 aaKnown RBP16.17■□□□□ 0.18
SHMT2-211ENST00000554310 POLA2Q14181 598 aa16.17■□□□□ 0.18
SHMT2-211ENST00000554310 CYP4F22Q6NT55 531 aa16.17■□□□□ 0.18
SHMT2-211ENST00000554310 SSH3Q8TE77 659 aa16.17■□□□□ 0.18
SHMT2-211ENST00000554310 SUGT1Q9Y2Z0 365 aa16.17■□□□□ 0.18
SHMT2-211ENST00000554310 NF2P35240 595 aa16.16■□□□□ 0.18
SHMT2-211ENST00000554310 RBM5P52756 815 aaKnown RBP eCLIP16.16■□□□□ 0.18
SHMT2-211ENST00000554310 HDLBPQ00341 1268 aaKnown RBP16.16■□□□□ 0.18
SHMT2-211ENST00000554310 TFCP2Q12800 502 aa16.16■□□□□ 0.18
SHMT2-211ENST00000554310 WDR66Q8TBY9 1149 aa16.16■□□□□ 0.18
SHMT2-211ENST00000554310 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
SHMT2-211ENST00000554310 PPP2R3BQ9Y5P8 575 aa16.16■□□□□ 0.18
SHMT2-211ENST00000554310 A0A1B0GUL7 405 aa16.15■□□□□ 0.18
SHMT2-211ENST00000554310 ATP8B2P98198 1209 aa16.15■□□□□ 0.18
SHMT2-211ENST00000554310 GRM1Q13255 1194 aa16.15■□□□□ 0.18
SHMT2-211ENST00000554310 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.188e-8■■■□□ 16.6
SHMT2-211ENST00000554310 MVPQ14764 893 aaKnown RBP16.15■□□□□ 0.18
SHMT2-211ENST00000554310 PRMT6Q96LA8 375 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-211ENST00000554310 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
SHMT2-211ENST00000554310 PDS5AQ29RF7 1337 aaKnown RBP16.15■□□□□ 0.18
SHMT2-211ENST00000554310 ADORA1P30542 326 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 PHKA1P46020 1223 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 CRKP46108 304 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 MAP2K1Q02750 393 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-211ENST00000554310 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
SHMT2-211ENST00000554310 TEKT1Q969V4 418 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms