RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 CAPNS2Q96L46 248 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
HNRNPC-205ENST00000553300 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 IFIT1P09914 478 aaKnown RBP16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 GYG1P46976 350 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 NBPF9Q3BBW0 867 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 MTMR14Q8NCE2 650 aa16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
HNRNPC-205ENST00000553300 CIAO1O76071 339 aa16.4■□□□□ 0.22
HNRNPC-205ENST00000553300 MAP2K2P36507 400 aa16.4■□□□□ 0.22
HNRNPC-205ENST00000553300 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
HNRNPC-205ENST00000553300 MEIS3Q99687 375 aa16.4■□□□□ 0.22
HNRNPC-205ENST00000553300 ASTN2O75129 1339 aaPredicted RBP16.4■□□□□ 0.22
HNRNPC-205ENST00000553300 HUNKP57058 714 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 FKBP1BP68106 108 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 LPIN2Q92539 896 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 CDCA5Q96FF9 252 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 ZBED3Q96IU2 234 aaPredicted RBP16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 WBP1LQ9NX94 342 aa16.39■□□□□ 0.21
HNRNPC-205ENST00000553300 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 FGFR2P21802 821 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 CYP4F22Q6NT55 531 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 APOBEC3FQ8IUX4 373 aaKnown RBP16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 MYO1BO43795 1136 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 SLC5A1P13866 664 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 MTX1Q13505 466 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 BEGAINQ9BUH8 593 aa16.38■□□□□ 0.21
HNRNPC-205ENST00000553300 GNAI2P04899 355 aa16.37■□□□□ 0.21
HNRNPC-205ENST00000553300 GRM1Q13255 1194 aa16.37■□□□□ 0.21
HNRNPC-205ENST00000553300 CCDC102AQ96A19 550 aa16.37■□□□□ 0.21
HNRNPC-205ENST00000553300 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
HNRNPC-205ENST00000553300 F8W031 263 aaPredicted RBP16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 NF2P35240 595 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 BCAMP50895 628 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 NOGQ13253 232 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 CFAP100Q494V2 611 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 RGMBQ6NW40 437 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 FTSJ3Q8IY81 847 aaKnown RBP16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 SIL1Q9H173 461 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
HNRNPC-205ENST00000553300 THSD7BQ9C0I4 1608 aa16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 TTF2Q9UNY4 1162 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 JAG2Q9Y219 1238 aa16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 SUGT1Q9Y2Z0 365 aa16.35■□□□□ 0.21
HNRNPC-205ENST00000553300 RBM5P52756 815 aaKnown RBP eCLIP16.34■□□□□ 0.215e-14■■□□□ 12.8
HNRNPC-205ENST00000553300 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 DZIP1LQ8IYY4 767 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 MRIQ9BWK5 157 aa16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
HNRNPC-205ENST00000553300 FOXN1O15353 648 aa16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 CA12O43570 354 aa16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 PRMT6Q96LA8 375 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 PRDM10Q9NQV6 1147 aa16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 IQSEC3Q9UPP2 1182 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-205ENST00000553300 ZBTB22O15209 634 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 AOC2O75106 756 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 MS4A1P11836 297 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 CHAF1AQ13111 956 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 COL13A1Q5TAT6 717 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 TNNQ9UQP3 1299 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 MAST3O60307 1309 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 PAPPA2Q9BXP8 1791 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 ECM29Q5VYK3 1845 aa16.32■□□□□ 0.2
HNRNPC-205ENST00000553300 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
HNRNPC-205ENST00000553300 TNFAIP1Q13829 316 aa16.31■□□□□ 0.2
HNRNPC-205ENST00000553300 IFFO2Q5TF58 517 aa16.31■□□□□ 0.2
HNRNPC-205ENST00000553300 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
HNRNPC-205ENST00000553300 SCAF8Q9UPN6 1271 aaKnown RBP16.31■□□□□ 0.2
HNRNPC-205ENST00000553300 FAM155AB1AL88 458 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-205ENST00000553300 SEMA3EO15041 775 aa16.3■□□□□ 0.2
HNRNPC-205ENST00000553300 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-205ENST00000553300 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
HNRNPC-205ENST00000553300 ARMC9Q7Z3E5 817 aa16.3■□□□□ 0.2
HNRNPC-205ENST00000553300 TEKT1Q969V4 418 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms