RNA–Protein interactions for RNA: ENST00000539770.5

ARL6IP4-216, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 1 (best)

Gene ARL6IP4, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-216	ENST00000539770	CERS5	Q8N5B7	392 aa		27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	RCAN3	Q9UKA8	241 aa		27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	HDAC9	Q9UKV0	1011 aa		27.71	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	ASTN2	O75129	1339 aa	Predicted RBP	27.7	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	TRPM7	Q96QT4	1865 aa		27.7	■■■□□ 2.03
ARL6IP4-216	ENST00000539770	SASH1	O94885	1247 aa		27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	SLC5A1	P13866	664 aa		27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	SCARF1	Q14162	830 aa		27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	FBXO33	Q7Z6M2	555 aa		27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	MKRN1	Q9UHC7	482 aa	Known RBP	27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	JAG2	Q9Y219	1238 aa		27.7	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	USP48	Q86UV5	1035 aa		27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	LPIN2	Q92539	896 aa		27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	PRDM10	Q9NQV6	1147 aa		27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	CEP126	Q9P2H0	1117 aa		27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ABT1	Q9ULW3	272 aa	Known RBP	27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ARAP2	Q8WZ64	1704 aa		27.69	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ANGEL2	Q5VTE6	544 aa	Known RBP	27.68	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	SULF1	Q8IWU6	871 aa		27.68	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	PITPNM2	Q9BZ72	1349 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ADM5	C9JUS6	153 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	CELF2	O95319	508 aa	Known RBP	27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	MS4A1	P11836	297 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ATP2B3	Q16720	1220 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	CST9	Q5W186	159 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	PANK1	Q8TE04	598 aa		27.67	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	PNMA6E	A0A0J9YXQ4	647 aa		27.66	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ZNF408	Q9H9D4	720 aa		27.66	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	RASSF10	A6NK89	507 aa		27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	WNT10B	O00744	389 aa		27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	ZBTB7B	O15156	539 aa	Predicted RBP	27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	BCAM	P50895	628 aa		27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	NBPF9	Q3BBW0	867 aa		27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	MFSD14B	Q5SR56	506 aa		27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.65	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	FRAT2	O75474	233 aa	Predicted RBP	27.64	■■■□□ 2.02
ARL6IP4-216	ENST00000539770	C1orf115	Q9H7X2	142 aa		27.64	■■■□□ 2.02
ARL6IP4-216	ENST00000539770		F8W031	263 aa	Predicted RBP	27.63	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	FOXN1	O15353	648 aa		27.63	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	CHAF1A	Q13111	956 aa	Predicted RBP	27.62	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	DLK2	Q6UY11	383 aa		27.62	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	ZBED3	Q96IU2	234 aa	Predicted RBP	27.62	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	TLL2	Q9Y6L7	1015 aa		27.62	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	DLGAP5	Q15398	846 aa		27.61	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	MTMR14	Q8NCE2	650 aa		27.61	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	TBC1D22A	Q8WUA7	517 aa		27.61	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	CTCF	P49711	727 aa	Predicted RBP	27.6	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	POLA2	Q14181	598 aa		27.6	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	DEFB115	Q30KQ5	88 aa		27.6	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	CDCA5	Q96FF9	252 aa		27.6	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	COL1A1	P02452	1464 aa	Predicted RBP	27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	TFCP2	Q12800	502 aa		27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	MVP	Q14764	893 aa	Known RBP	27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	CFAP100	Q494V2	611 aa		27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	SAPCD2	Q86UD0	394 aa		27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	SSH3	Q8TE77	659 aa		27.59	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	VEGFB	P49765	207 aa		27.58	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	ATP8B2	P98198	1209 aa		27.58	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	TTF2	Q9UNY4	1162 aa	Known RBP	27.58	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	AKAP2	Q9Y2D5	859 aa		27.58	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	POLR2A	P24928	1970 aa	Known RBP	27.58	■■■□□ 2.01
ARL6IP4-216	ENST00000539770	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.57	■■■□□ 2
ARL6IP4-216	ENST00000539770	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.57	■■■□□ 2
ARL6IP4-216	ENST00000539770	AIDA	Q96BJ3	306 aa		27.57	■■■□□ 2
ARL6IP4-216	ENST00000539770	SPDYE2B	A6NHP3	402 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	SPDYE6	P0CI01	402 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	ADORA1	P30542	326 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	GNL3L	Q9NVN8	582 aa	Known RBP	27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	SERPINA10	Q9UK55	444 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	DDX19B	Q9UMR2	479 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770	MYH13	Q9UKX3	1938 aa		27.56	■■■□□ 2
ARL6IP4-216	ENST00000539770		A0A1B0GUL7	405 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	CEP85	Q6P2H3	762 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	GBA2	Q9HCG7	927 aa	Predicted RBP	27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	WBP1L	Q9NX94	342 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	SCAF8	Q9UPN6	1271 aa	Known RBP	27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	COG6	Q9Y2V7	657 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	PCDHAC2	Q9Y5I4	1007 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	THSD7B	Q9C0I4	1608 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	ECM29	Q5VYK3	1845 aa		27.55	■■■□□ 2
ARL6IP4-216	ENST00000539770	MYO1B	O43795	1136 aa		27.54	■■■□□ 2
ARL6IP4-216	ENST00000539770	PHKA1	P46020	1223 aa		27.54	■■■□□ 2
ARL6IP4-216	ENST00000539770	RBM5	P52756	815 aa	Known RBP eCLIP	27.54	■■■□□ 2	2e-6	■■■■□ 21.2
ARL6IP4-216	ENST00000539770	GRIK5	Q16478	980 aa		27.54	■■■□□ 2
ARL6IP4-216	ENST00000539770	HHIPL1	Q96JK4	782 aa		27.54	■■■□□ 2
ARL6IP4-216	ENST00000539770	SEMA3E	O15041	775 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	ECE1	P42892	770 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	CCDC102B	Q68D86	513 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	C2orf69	Q8N8R5	385 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	WDR66	Q8TBY9	1149 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	CAPNS2	Q96L46	248 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	YTHDC1	Q96MU7	727 aa	Known RBP	27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	SUGT1	Q9Y2Z0	365 aa		27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.53	■■■□□ 2
ARL6IP4-216	ENST00000539770	MAST3	O60307	1309 aa		27.52	■■■□□ 2
ARL6IP4-216	ENST00000539770	WDR33	Q9C0J8	1336 aa	Known RBP	27.52	■■■□□ 2
ARL6IP4-216	ENST00000539770	ZBTB22	O15209	634 aa		27.52	■■■□□ 2
ARL6IP4-216	ENST00000539770	TIMM10	P62072	90 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms