RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 IL1R1P14778 569 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 NOGQ13253 232 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 UBE4AQ14139 1066 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 RABL6Q3YEC7 729 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 PRAMEF18Q5VWM3 479 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 CERS5Q8N5B7 392 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 ZIC5Q96T25 663 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 MROH5Q6ZUA9 1318 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
SFSWAP-202ENST00000535202 FAM155AB1AL88 458 aaPredicted RBP10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 CT47B1P0C2W7 299 aaPredicted RBP10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 GYG1P46976 350 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 MMP14P50281 582 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 LRRC24Q50LG9 513 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 METTL24Q5JXM2 366 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 KLHDC4Q8TBB5 520 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 NOB1Q9ULX3 412 aaKnown RBP10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 RIPOR2Q9Y4F9 1068 aa10.71□□□□□ -0.69
SFSWAP-202ENST00000535202 ARAP2Q8WZ64 1704 aa10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 HIBADHP31937 336 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 FKBP1AP62942 108 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 DLGAP5Q15398 846 aa10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 MOB2Q70IA6 237 aa10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 APOBEC3FQ8IUX4 373 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-202ENST00000535202 CA12O43570 354 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 SLC10A3P09131 477 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 UBTFL1P0CB47 393 aaPredicted RBP10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 NF2P35240 595 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 FKBP1BP68106 108 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 KIF23Q02241 960 aaPredicted RBP10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 CFAP100Q494V2 611 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 VPS37DQ86XT2 251 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 RASAL3Q86YV0 1011 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 ZBED3Q96IU2 234 aaPredicted RBP10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
SFSWAP-202ENST00000535202 AKAP11Q9UKA4 1901 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 CLRN2A0PK11 232 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 UBE2Q2LH0YL09 131 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 MYO1BO43795 1136 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 RBM5P52756 815 aaKnown RBP eCLIP10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 PRKG1Q13976 671 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 MFSD14BQ5SR56 506 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 VGLL2Q8N8G2 317 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 MTMR14Q8NCE2 650 aa10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 IQSEC3Q9UPP2 1182 aaPredicted RBP10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
SFSWAP-202ENST00000535202 KIF16BQ96L93 1317 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 CASP8AP2Q9UKL3 1982 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 MYH13Q9UKX3 1938 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 PDE8BO95263 885 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 RFX5P48382 616 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 CHAF1AQ13111 956 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 CAVIN4Q5BKX8 364 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 VEZTQ9HBM0 779 aa10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 TTF2Q9UNY4 1162 aaKnown RBP10.67□□□□□ -0.7
SFSWAP-202ENST00000535202 AOX1Q06278 1338 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 EYA2O00167 538 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 PTPN12Q05209 780 aaKnown RBP10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 ARMC9Q7Z3E5 817 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 FBXO33Q7Z6M2 555 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 PRMT6Q96LA8 375 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 SIL1Q9H173 461 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 DEFB129Q9H1M3 183 aa10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 LRRFIP2Q9Y608 721 aaKnown RBP10.66□□□□□ -0.7
SFSWAP-202ENST00000535202 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 SLC5A1P13866 664 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 BCAMP50895 628 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 HNRNPUQ00839 825 aaKnown RBP eCLIP10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 CSRNP1Q96S65 589 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 MEIS3Q99687 375 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 ANGEL1Q9UNK9 670 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 FZD1Q9UP38 647 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 PPP2R3BQ9Y5P8 575 aa10.65□□□□□ -0.7
SFSWAP-202ENST00000535202 TRPA1O75762 1119 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 NEFLP07196 543 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 FGFR2P21802 821 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 CRKP46108 304 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 GRIK5Q16478 980 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 TBC1D22AQ8WUA7 517 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
SFSWAP-202ENST00000535202 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms