RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 RAC1P63000 192 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 FAM35AQ86V20 835 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 NUDT8Q8WV74 236 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 LPIN3Q9BQK8 851 aa11.13□□□□□ -0.63
CHKA-205ENST00000530730 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
CHKA-205ENST00000530730 NEURL4Q96JN8 1562 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 NPHP4O75161 1426 aaPredicted RBP11.12□□□□□ -0.63
CHKA-205ENST00000530730 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
CHKA-205ENST00000530730 ZBTB42B2RXF5 422 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
CHKA-205ENST00000530730 DOC2BQ14184 412 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 DTWD1Q8N5C7 304 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 MAP3K1Q13233 1512 aa11.12□□□□□ -0.63
CHKA-205ENST00000530730 SPATA31D1Q6ZQQ2 1576 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 ABCC3O15438 1527 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 SASH3O75995 380 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 BRD2P25440 801 aaKnown RBP11.11□□□□□ -0.63
CHKA-205ENST00000530730 GRIK4Q16099 956 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 CLP1Q92989 425 aaKnown RBP11.11□□□□□ -0.63
CHKA-205ENST00000530730 PBXIP1Q96AQ6 731 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 RRP7BPQ9NSQ0 103 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
CHKA-205ENST00000530730 MED14O60244 1454 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 MAST1Q9Y2H9 1570 aa11.11□□□□□ -0.63
CHKA-205ENST00000530730 CPS1P31327 1500 aa11.1□□□□□ -0.63
CHKA-205ENST00000530730 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
CHKA-205ENST00000530730 ADGRE1Q14246 886 aa11.1□□□□□ -0.63
CHKA-205ENST00000530730 GRIK5Q16478 980 aa11.1□□□□□ -0.63
CHKA-205ENST00000530730 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
CHKA-205ENST00000530730 FMR1NBQ8N0W7 255 aaPredicted RBP11.1□□□□□ -0.63
CHKA-205ENST00000530730 LENG1Q96BZ8 264 aaPredicted RBP11.1□□□□□ -0.63
CHKA-205ENST00000530730 KCNMB2Q9Y691 235 aa11.1□□□□□ -0.63
CHKA-205ENST00000530730 VWDEQ8N2E2 1590 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 XYLBO75191 536 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 SELPP16109 830 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 SOX18P35713 384 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
CHKA-205ENST00000530730 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
CHKA-205ENST00000530730 NKAPLQ5M9Q1 402 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 PERM1Q5SV97 790 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 SERPINA10Q9UK55 444 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 ABCC5O15440 1437 aa11.09□□□□□ -0.63
CHKA-205ENST00000530730 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 CPB1P15086 417 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 LTKP29376 864 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 ETFBKMTQ8IXQ9 262 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 RGL4Q8IZJ4 473 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 SAP130Q9H0E3 1048 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
CHKA-205ENST00000530730 RNF17Q9BXT8 1623 aaKnown RBP11.08□□□□□ -0.64
CHKA-205ENST00000530730 KIF15Q9NS87 1388 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 ITGB7P26010 798 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
CHKA-205ENST00000530730 FAM13BQ9NYF5 915 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
CHKA-205ENST00000530730 POLR1AO95602 1720 aaPredicted RBP11.06□□□□□ -0.64
CHKA-205ENST00000530730 DEPDC5O75140 1603 aa11.06□□□□□ -0.64
CHKA-205ENST00000530730 MROH1Q8NDA8 1641 aa11.06□□□□□ -0.64
CHKA-205ENST00000530730 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
CHKA-205ENST00000530730 PLAURQ03405 335 aa11.06□□□□□ -0.64
CHKA-205ENST00000530730 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
CHKA-205ENST00000530730 ARHGAP31Q2M1Z3 1444 aa11.05□□□□□ -0.64
CHKA-205ENST00000530730 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
CHKA-205ENST00000530730 DMRTC2Q8IXT2 367 aaPredicted RBP11.05□□□□□ -0.64
CHKA-205ENST00000530730 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
CHKA-205ENST00000530730 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
CHKA-205ENST00000530730 EIF2AK4Q9P2K8 1649 aaKnown RBP11.05□□□□□ -0.64
CHKA-205ENST00000530730 PSAPP07602 524 aa11.04□□□□□ -0.64
CHKA-205ENST00000530730 FBXO11Q86XK2 927 aa11.04□□□□□ -0.64
CHKA-205ENST00000530730 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
CHKA-205ENST00000530730 DAPK1P53355 1430 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 ERBINQ96RT1 1412 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 MMP20O60882 483 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 IDI1Q13907 227 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 WFDC8Q8IUA0 241 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 EID1Q9Y6B2 187 aa11.03□□□□□ -0.64
CHKA-205ENST00000530730 ZC3H13Q5T200 1668 aaKnown RBP11.03□□□□□ -0.64
CHKA-205ENST00000530730 ALKQ9UM73 1620 aa11.02□□□□□ -0.64
CHKA-205ENST00000530730 IQGAP1P46940 1657 aa11.02□□□□□ -0.64
CHKA-205ENST00000530730 SCAF11Q99590 1463 aaKnown RBP11.02□□□□□ -0.65
CHKA-205ENST00000530730 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.65
CHKA-205ENST00000530730 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
CHKA-205ENST00000530730 SMG9Q9H0W8 520 aaKnown RBP11.02□□□□□ -0.65
CHKA-205ENST00000530730 KANK1Q14678 1352 aa11.02□□□□□ -0.65
CHKA-205ENST00000530730 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 DYRK3O43781 588 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 H2AFB1P0C5Y9 115 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 SIK1P57059 783 aa11.01□□□□□ -0.65
CHKA-205ENST00000530730 TRIP4Q15650 581 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms