RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 FBXW7Q969H0 707 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 PLA2G12BQ9BX93 195 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 PRO3102Q9H379 93 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 CD209Q9NNX6 404 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 PTCH2Q9Y6C5 1203 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 IREB2P48200 963 aaKnown RBP20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 RALBP1Q15311 655 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 ANKRD2Q9GZV1 360 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 PCDHAC2Q9Y5I4 1007 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 AOX1Q06278 1338 aa20.98■□□□□ 0.95
CHMP4A-203ENST00000527154 H7C1W4 665 aa20.97■□□□□ 0.95
CHMP4A-203ENST00000527154 SLC9C1Q4G0N8 1177 aa20.97■□□□□ 0.95
CHMP4A-203ENST00000527154 NBPF11Q86T75 865 aa20.97■□□□□ 0.95
CHMP4A-203ENST00000527154 PRMT6Q96LA8 375 aaPredicted RBP20.97■□□□□ 0.95
CHMP4A-203ENST00000527154 OTOFQ9HC10 1997 aa20.97■□□□□ 0.95
CHMP4A-203ENST00000527154 DDX58O95786 925 aaKnown RBP20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 KSR2Q6VAB6 950 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 BRI3BPQ8WY22 251 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 IFT57Q9NWB7 429 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 MAP3K2Q9Y2U5 619 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 COL6A3P12111 3177 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 A0A0C4DFX4 3053 aa20.96■□□□□ 0.95
CHMP4A-203ENST00000527154 CSF1RP07333 972 aa20.95■□□□□ 0.94
CHMP4A-203ENST00000527154 IL1R1P14778 569 aa20.95■□□□□ 0.94
CHMP4A-203ENST00000527154 IGHMBP2P38935 993 aaKnown RBP20.95■□□□□ 0.94
CHMP4A-203ENST00000527154 ARHGEF6Q15052 776 aa20.95■□□□□ 0.94
CHMP4A-203ENST00000527154 CFAP100Q494V2 611 aa20.95■□□□□ 0.94
CHMP4A-203ENST00000527154 CASP7P55210 303 aa20.94■□□□□ 0.94
CHMP4A-203ENST00000527154 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.94■□□□□ 0.94
CHMP4A-203ENST00000527154 OPTNQ96CV9 577 aa20.94■□□□□ 0.94
CHMP4A-203ENST00000527154 TEPSINQ96N21 525 aa20.94■□□□□ 0.94
CHMP4A-203ENST00000527154 LAMA3Q16787 3333 aa20.94■□□□□ 0.94
CHMP4A-203ENST00000527154 CLRN2A0PK11 232 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 NEURL1BA8MQ27 555 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 MYO1BO43795 1136 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 ITGA6P23229 1130 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 RASA3Q14644 834 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 UBE2Q1Q7Z7E8 422 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 SHISA4Q96DD7 197 aa20.93■□□□□ 0.94
CHMP4A-203ENST00000527154 CHRNDQ07001 517 aa20.92■□□□□ 0.94
CHMP4A-203ENST00000527154 C8orf58Q8NAV2 365 aa20.92■□□□□ 0.94
CHMP4A-203ENST00000527154 ZFYVE28Q9HCC9 887 aa20.92■□□□□ 0.94
CHMP4A-203ENST00000527154 ZCCHC17Q9NP64 241 aaKnown RBP20.92■□□□□ 0.94
CHMP4A-203ENST00000527154 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
CHMP4A-203ENST00000527154 SLC4A8Q2Y0W8 1093 aa20.91■□□□□ 0.94
CHMP4A-203ENST00000527154 CCDC30Q5VVM6 783 aa20.91■□□□□ 0.94
CHMP4A-203ENST00000527154 CHRDL2Q6WN34 429 aa20.91■□□□□ 0.94
CHMP4A-203ENST00000527154 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
CHMP4A-203ENST00000527154 GNRH1P01148 92 aa20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 GNAI1P63096 354 aa20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 TAF1CQ15572 869 aaPredicted RBP20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 CWF19L2Q2TBE0 894 aaKnown RBP20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 SPDYE2Q495Y8 402 aa20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 FAM43AQ8N2R8 423 aa20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 ELP3Q9H9T3 547 aa20.9■□□□□ 0.94
CHMP4A-203ENST00000527154 SNAP23O00161 211 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 ELL2O00472 640 aaPredicted RBP20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 TLR2O60603 784 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 GTF2A2P52657 109 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 PRMT2P55345 433 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 UBE3BQ7Z3V4 1068 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 CNKSR2Q8WXI2 1034 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.93
CHMP4A-203ENST00000527154 CCL15-CCL14A0A0B4J2E2 113 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 LACTBP83111 547 aaPredicted RBP20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 TNFAIP1Q13829 316 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 VGLL4Q14135 290 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 CCL15Q16663 113 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 CDAN1Q8IWY9 1227 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 MPHOSPH8Q99549 860 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 VEZTQ9HBM0 779 aa20.88■□□□□ 0.93
CHMP4A-203ENST00000527154 A0A1B0GUL6 1792 aa20.87■□□□□ 0.93
CHMP4A-203ENST00000527154 FAM205AQ6ZU69 1335 aa20.87■□□□□ 0.93
CHMP4A-203ENST00000527154 MYBBP1AQ9BQG0 1328 aaKnown RBP20.87■□□□□ 0.93
CHMP4A-203ENST00000527154 SH3TC2Q8TF17 1288 aa20.87■□□□□ 0.93
CHMP4A-203ENST00000527154 ARHGAP39Q9C0H5 1083 aa20.87■□□□□ 0.93
CHMP4A-203ENST00000527154 SPDYE5A6NIY4 337 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 DLL1O00548 723 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 MAP3K9P80192 1104 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 NEXNQ0ZGT2 675 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 GCKRQ14397 625 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 ZNF70Q9UC06 446 aaPredicted RBP20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 SERPINA10Q9UK55 444 aa20.86■□□□□ 0.93
CHMP4A-203ENST00000527154 ZSWIM8A7E2V4 1837 aa20.85■□□□□ 0.93
CHMP4A-203ENST00000527154 F8W031 263 aaPredicted RBP20.85■□□□□ 0.93
CHMP4A-203ENST00000527154 CALD1Q05682 793 aaKnown RBP20.85■□□□□ 0.93
CHMP4A-203ENST00000527154 TSPYL6Q8N831 410 aa20.85■□□□□ 0.93
CHMP4A-203ENST00000527154 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
CHMP4A-203ENST00000527154 ARAP2Q8WZ64 1704 aa20.84■□□□□ 0.93
CHMP4A-203ENST00000527154 KCNJ4P48050 445 aa20.84■□□□□ 0.93
CHMP4A-203ENST00000527154 ZNF804AQ7Z570 1209 aa20.84■□□□□ 0.93
CHMP4A-203ENST00000527154 CUL9Q8IWT3 2517 aa20.84■□□□□ 0.93
CHMP4A-203ENST00000527154 A0A1W2PPC1 479 aa20.83■□□□□ 0.93
CHMP4A-203ENST00000527154 TAF5LO75529 589 aa20.83■□□□□ 0.93
CHMP4A-203ENST00000527154 MTFR1Q15390 333 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms