RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PARP1P09874 1014 aaKnown RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 EHBP1Q8NDI1 1231 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 ARHGEF10LQ9HCE6 1279 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 KRT24Q2M2I5 525 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 MMRN2Q9H8L6 949 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 GCOM1H8Y6P7 765 aaPredicted RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 APBA3O96018 575 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 MYZAPP0CAP1 466 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 KRT2P35908 639 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 DHX32Q7L7V1 743 aaKnown RBP18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
PCDHA3-201ENST00000522353 BACH1O14867 736 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 MBD4O95243 580 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 CALRP27797 417 aaKnown RBP18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 JAG2Q9Y219 1238 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 PABPN1LA6NDY0 278 aaKnown RBP18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 FAM13AO94988 1023 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 PRPF4BQ13523 1007 aaKnown RBP18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 FLAD1Q8NFF5 587 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 HELLSQ9NRZ9 838 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 APBB1IPQ7Z5R6 666 aaPredicted RBP18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 WDR62O43379 1518 aa18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.48■□□□□ 0.55
PCDHA3-201ENST00000522353 POTEB2H3BUK9 544 aa18.47■□□□□ 0.55
PCDHA3-201ENST00000522353 KLHL40Q2TBA0 621 aa18.47■□□□□ 0.55
PCDHA3-201ENST00000522353 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
PCDHA3-201ENST00000522353 A0A1B0GUL7 405 aa18.47■□□□□ 0.55
PCDHA3-201ENST00000522353 RAB3GAP1Q15042 981 aa18.47■□□□□ 0.55
PCDHA3-201ENST00000522353 ALDH1B1P30837 517 aa18.46■□□□□ 0.55
PCDHA3-201ENST00000522353 ISM2Q6H9L7 571 aa18.46■□□□□ 0.55
PCDHA3-201ENST00000522353 IVNS1ABPQ9Y6Y0 642 aa18.46■□□□□ 0.55
PCDHA3-201ENST00000522353 SPECC1Q5M775 1068 aa18.46■□□□□ 0.55
PCDHA3-201ENST00000522353 SHTN1A0MZ66 631 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 BEGAINQ9BUH8 593 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 HLTFQ14527 1009 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 DNAJC10Q8IXB1 793 aa18.45■□□□□ 0.54
PCDHA3-201ENST00000522353 SPTLC2O15270 562 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 IL13P35225 146 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 ERVV-2B6SEH9 535 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 A1BGP04217 495 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 DTHD1Q6ZMT9 781 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 NIM1KQ8IY84 436 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 DDX12PQ92771 950 aa18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 TTC12Q9H892 705 aaPredicted RBP18.44■□□□□ 0.54
PCDHA3-201ENST00000522353 RRP9O43818 475 aaKnown RBP18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 ADCY5O95622 1261 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 ZNF408Q9H9D4 720 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 BRAPQ7Z569 592 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 MARCKSP29966 332 aaPredicted RBP18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 PRPHP41219 470 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 LPIN2Q92539 896 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 ATP7AQ04656 1500 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 PLCD4Q9BRC7 762 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 TRMT1Q9NXH9 659 aaKnown RBP18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 GOLGA6L10A0A0M3HER8 536 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 FSD2A1L4K1 749 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 SMC1AQ14683 1233 aaKnown RBP18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 NOD1Q9Y239 953 aa18.43■□□□□ 0.54
PCDHA3-201ENST00000522353 STAMBPO95630 424 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 TIMM10P62072 90 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 MSANTD4Q8NCY6 345 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 INCENPQ9NQS7 918 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 SSX2IPQ9Y2D8 614 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 BICDL2A1A5D9 508 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 LMAN1P49257 510 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 UBASH3AP57075 661 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 DHX58Q96C10 678 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 CGNQ9P2M7 1197 aaKnown RBP18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 KIAA0753Q2KHM9 967 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 TMEM87BQ96K49 555 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 TSNARE1Q96NA8 513 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 MRVI1Q9Y6F6 885 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
PCDHA3-201ENST00000522353 APOBRQ0VD83 1088 aa18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 NEO1Q92859 1461 aa18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 TAF12Q16514 161 aa18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 APPBP2Q92624 585 aa18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 XAGE2Q96GT9 111 aa18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 C16orf45Q96MC5 204 aaPredicted RBP18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
PCDHA3-201ENST00000522353 DKC1O60832 514 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 CHST3Q7LGC8 479 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 JADE2Q9NQC1 790 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 F13A1P00488 732 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 SP4Q02446 784 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms