RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 MAP4P27816 1152 aaKnown RBP7.34□□□□□ -1.23
HDAC2-208ENST00000520746 SGO2Q562F6 1265 aa7.34□□□□□ -1.23
HDAC2-208ENST00000520746 XKR5Q6UX68 686 aa7.34□□□□□ -1.23
HDAC2-208ENST00000520746 PIM2Q9P1W9 311 aa7.34□□□□□ -1.23
HDAC2-208ENST00000520746 C19orf57Q0VDD7 668 aa7.33□□□□□ -1.24
HDAC2-208ENST00000520746 ABI1Q8IZP0 508 aa7.33□□□□□ -1.24
HDAC2-208ENST00000520746 EDEM1Q92611 657 aa7.33□□□□□ -1.24
HDAC2-208ENST00000520746 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
HDAC2-208ENST00000520746 A6NHS1 94 aa7.32□□□□□ -1.24
HDAC2-208ENST00000520746 F13BP05160 661 aa7.32□□□□□ -1.24
HDAC2-208ENST00000520746 RPLP1P05386 114 aaKnown RBP7.32□□□□□ -1.24
HDAC2-208ENST00000520746 ARL4DP49703 201 aa7.32□□□□□ -1.24
HDAC2-208ENST00000520746 TMPRSS13Q9BYE2 586 aa7.32□□□□□ -1.24
HDAC2-208ENST00000520746 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
HDAC2-208ENST00000520746 SOX1O00570 391 aaPredicted RBP7.31□□□□□ -1.24
HDAC2-208ENST00000520746 TIAF1O95411 115 aa7.31□□□□□ -1.24
HDAC2-208ENST00000520746 ATP2B4P23634 1241 aa7.31□□□□□ -1.24
HDAC2-208ENST00000520746 DNM1Q05193 864 aaKnown RBP7.31□□□□□ -1.24
HDAC2-208ENST00000520746 MSMPQ1L6U9 139 aa7.31□□□□□ -1.24
HDAC2-208ENST00000520746 FBXL6Q8N531 539 aa7.31□□□□□ -1.24
HDAC2-208ENST00000520746 TMEM102Q8N9M5 508 aaPredicted RBP7.31□□□□□ -1.24
HDAC2-208ENST00000520746 PDGFAP04085 211 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 RXRBP28702 533 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 NUTM2GQ5VZR2 741 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 VN1R5Q7Z5H4 357 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 SHISA5Q8N114 240 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 SMG8Q8ND04 991 aaKnown RBP7.3□□□□□ -1.24
HDAC2-208ENST00000520746 NXPE3Q969Y0 559 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 USP26Q9BXU7 913 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 SUGCTQ9HAC7 445 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 ATG3Q9NT62 314 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 LEMD3Q9Y2U8 911 aa7.3□□□□□ -1.24
HDAC2-208ENST00000520746 LOC100289279A0A1B0GTE1 492 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 DLGAP3O95886 979 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 FOSL1P15407 271 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 IKBKEQ14164 716 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 NFXL1Q6ZNB6 911 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 C12orf50Q8NA57 414 aaPredicted RBP7.29□□□□□ -1.24
HDAC2-208ENST00000520746 GIMAP7Q8NHV1 300 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 HELQQ8TDG4 1101 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 BSNDQ8WZ55 320 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 OSMRQ99650 979 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 ZKSCAN3Q9BRR0 538 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 OSBPL1AQ9BXW6 950 aa7.29□□□□□ -1.24
HDAC2-208ENST00000520746 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
HDAC2-208ENST00000520746 PCSK2P16519 638 aa7.28□□□□□ -1.24
HDAC2-208ENST00000520746 CPSF6Q16630 551 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC2-208ENST00000520746 PMEPA1Q969W9 287 aa7.28□□□□□ -1.24
HDAC2-208ENST00000520746 CYP4F12Q9HCS2 524 aa7.28□□□□□ -1.24
HDAC2-208ENST00000520746 CCDC39Q9UFE4 941 aa7.28□□□□□ -1.24
HDAC2-208ENST00000520746 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
HDAC2-208ENST00000520746 EREGO14944 169 aa7.27□□□□□ -1.25
HDAC2-208ENST00000520746 PRNPP04156 253 aa7.27□□□□□ -1.25
HDAC2-208ENST00000520746 MZF1P28698 734 aaPredicted RBP7.27□□□□□ -1.25
HDAC2-208ENST00000520746 FZD5Q13467 585 aa7.27□□□□□ -1.25
HDAC2-208ENST00000520746 NOM1Q5C9Z4 860 aaKnown RBP7.27□□□□□ -1.25
HDAC2-208ENST00000520746 FAM95CA0A1B0GW59 222 aa7.26□□□□□ -1.25
HDAC2-208ENST00000520746 DRD2P14416 443 aa7.26□□□□□ -1.25
HDAC2-208ENST00000520746 EIF1AXP47813 144 aaKnown RBP7.26□□□□□ -1.25
HDAC2-208ENST00000520746 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
HDAC2-208ENST00000520746 CBLL1Q75N03 491 aa7.26□□□□□ -1.25
HDAC2-208ENST00000520746 FBLIM1Q8WUP2 373 aa7.26□□□□□ -1.25
HDAC2-208ENST00000520746 SOX17Q9H6I2 414 aaPredicted RBP7.26□□□□□ -1.25
HDAC2-208ENST00000520746 MPSTP25325 297 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 ADMP35318 185 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 NFKBIBQ15653 356 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 PAOXQ6QHF9 649 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 VSIG10LQ86VR7 867 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 C2CD4AQ8NCU7 369 aaPredicted RBP7.25□□□□□ -1.25
HDAC2-208ENST00000520746 PBXIP1Q96AQ6 731 aa7.25□□□□□ -1.25
HDAC2-208ENST00000520746 BHLHE41Q9C0J9 482 aaPredicted RBP7.25□□□□□ -1.25
HDAC2-208ENST00000520746 ESRRAP11474 423 aaPredicted RBP7.24□□□□□ -1.25
HDAC2-208ENST00000520746 USP11P51784 963 aa7.24□□□□□ -1.25
HDAC2-208ENST00000520746 EXOSC6Q5RKV6 272 aaKnown RBP7.24□□□□□ -1.25
HDAC2-208ENST00000520746 TTC16Q8NEE8 873 aa7.24□□□□□ -1.25
HDAC2-208ENST00000520746 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
HDAC2-208ENST00000520746 FBXL18Q96ME1 805 aa7.24□□□□□ -1.25
HDAC2-208ENST00000520746 METTL22Q9BUU2 404 aaPredicted RBP7.24□□□□□ -1.25
HDAC2-208ENST00000520746 ARID3CA6NKF2 412 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 PHACTR2O75167 634 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 TNFRSF21O75509 655 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 EDN3P14138 238 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 OGFOD2Q6N063 350 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 ZAR1Q86SH2 424 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 NRSN2Q9GZP1 204 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 LATS2Q9NRM7 1088 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 PRKAG2Q9UGJ0 569 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 FOXD3Q9UJU5 478 aaPredicted RBP7.23□□□□□ -1.25
HDAC2-208ENST00000520746 POLIQ9UNA4 740 aa7.23□□□□□ -1.25
HDAC2-208ENST00000520746 CYP26A1O43174 497 aa7.22□□□□□ -1.25
HDAC2-208ENST00000520746 GSTM4Q03013 218 aa7.22□□□□□ -1.25
HDAC2-208ENST00000520746 SOX4Q06945 474 aaPredicted RBP7.22□□□□□ -1.25
HDAC2-208ENST00000520746 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
HDAC2-208ENST00000520746 SNX29Q8TEQ0 813 aa7.22□□□□□ -1.25
HDAC2-208ENST00000520746 EZH1Q92800 747 aaPredicted RBP7.22□□□□□ -1.25
HDAC2-208ENST00000520746 GATA6Q92908 595 aa7.22□□□□□ -1.25
HDAC2-208ENST00000520746 TBC1D32Q96NH3 1257 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms