RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 EFCAB2Q5VUJ9 269 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 CHSY3Q70JA7 882 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 TNFRSF25Q93038 417 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 EFCC1Q9HA90 598 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 TPSG1Q9NRR2 321 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 TLR7Q9NYK1 1049 aaKnown RBP5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 LRRIQ1Q96JM4 1722 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 CCDC18Q5T9S5 1454 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 SCAPERQ9BY12 1400 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 KIF14Q15058 1648 aa5.56□□□□□ -1.52
UBE2D3-226ENST00000508635 PCF11O94913 1555 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 CFAP74Q9C0B2 1584 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 ZMYM4Q5VZL5 1548 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 RICTORQ6R327 1708 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 ADARB2-AS1A8MUL3 147 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 J3QW42 95 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 CYP2E1P05181 493 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 RPLP1P05386 114 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 PSAPP07602 524 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 USP5P45974 858 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 PDE12Q6L8Q7 609 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 FAM35AQ86V20 835 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 GJD3Q8N144 294 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 NUDT8Q8WV74 236 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 KRTAP4-5Q9BYR2 181 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 GZF1Q9H116 711 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 ABI2Q9NYB9 513 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 CNTN3Q9P232 1028 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 FOXD3Q9UJU5 478 aaPredicted RBP5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 SLC6A14Q9UN76 642 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 POGZQ7Z3K3 1410 aa5.55□□□□□ -1.52
UBE2D3-226ENST00000508635 ARHGEF40Q8TER5 1519 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 ADAMTSL3P82987 1691 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 MAGI2Q86UL8 1455 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 FYCO1Q9BQS8 1478 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 MAPK1P28482 360 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 PLAURQ03405 335 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 C8orf86Q6ZUL3 223 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 C1orf127Q8N9H9 656 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 MDFIQ99750 246 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 NAGPAQ9UK23 515 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 YEATS2Q9ULM3 1422 aa5.54□□□□□ -1.52
UBE2D3-226ENST00000508635 ARHGAP5Q13017 1502 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 ZFYVE16Q7Z3T8 1539 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 ARID4BQ4LE39 1312 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 PTPRMP28827 1452 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 SPDYE3A6NKU9 549 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 TNFRSF21O75509 655 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 ALBP02768 609 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 EIF2AK2P19525 551 aaKnown RBP5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 GPLD1P80108 840 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 EHHADHQ08426 723 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 COL13A1Q5TAT6 717 aaPredicted RBP5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 PSAPL1Q6NUJ1 521 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 XKR5Q6UX68 686 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 AFAP1Q8N556 730 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 OR13H1Q8NG92 308 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 TRPM4Q8TD43 1214 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 DCTN4Q9UJW0 460 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 MYO5CQ9NQX4 1742 aa5.53□□□□□ -1.52
UBE2D3-226ENST00000508635 BCORL1Q5H9F3 1711 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 HECW2Q9P2P5 1572 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 LOC102724428A0A0B4J2F2 783 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 M0R082 166 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 PHACTR2O75167 634 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 CES1P23141 567 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 NRLP54845 237 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 SIK1P57059 783 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 ELMSAN1Q6PJG2 1045 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 ZNF417Q8TAU3 575 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 ZNF587Q96SQ5 575 aaPredicted RBP5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 NIF3L1Q9GZT8 377 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 ARHGEF12Q9NZN5 1544 aa5.52□□□□□ -1.53
UBE2D3-226ENST00000508635 ATP10AO60312 1499 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 ZNF518AQ6AHZ1 1483 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 SIGLEC1Q9BZZ2 1709 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 KDM5CP41229 1560 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 CEP162Q5TB80 1403 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 ZBTB7CA1YPR0 619 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 EREGO14944 169 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 GPR182O15218 404 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 GHRHP01286 108 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 POLR3DP05423 398 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 H2AFB2P0C5Z0 115 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 SOX18P35713 384 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 HYAL2Q12891 473 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 PDE3BQ13370 1112 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 ORC1Q13415 861 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 COL9A3Q14050 684 aaPredicted RBP5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 PCSK7Q16549 785 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 SND1Q7KZF4 910 aaKnown RBP eCLIP5.51□□□□□ -1.533e-6■□□□□ 8.1
UBE2D3-226ENST00000508635 TMC7Q7Z402 723 aa5.51□□□□□ -1.53
UBE2D3-226ENST00000508635 NCAPG2Q86XI2 1143 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms