RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 MTMR14Q8NCE2 650 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 GBA2Q9HCG7 927 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-203ENST00000504315 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
HOXC6-203ENST00000504315 EYA2O00167 538 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
HOXC6-203ENST00000504315 BCAR3O75815 825 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
HOXC6-203ENST00000504315 GYG1P46976 350 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 MEIS3Q99687 375 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 LAMB1P07942 1786 aa17.12■□□□□ 0.33
HOXC6-203ENST00000504315 FGFR2P21802 821 aa17.11■□□□□ 0.33
HOXC6-203ENST00000504315 MAP2K2P36507 400 aa17.11■□□□□ 0.33
HOXC6-203ENST00000504315 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-203ENST00000504315 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
HOXC6-203ENST00000504315 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
HOXC6-203ENST00000504315 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
HOXC6-203ENST00000504315 FOXN1O15353 648 aa17.1■□□□□ 0.33
HOXC6-203ENST00000504315 CIAO1O76071 339 aa17.1■□□□□ 0.33
HOXC6-203ENST00000504315 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
HOXC6-203ENST00000504315 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
HOXC6-203ENST00000504315 C2orf69Q8N8R5 385 aa17.1■□□□□ 0.33
HOXC6-203ENST00000504315 GNAI3P08754 354 aa17.09■□□□□ 0.33
HOXC6-203ENST00000504315 HUNKP57058 714 aa17.09■□□□□ 0.33
HOXC6-203ENST00000504315 MTX1Q13505 466 aa17.09■□□□□ 0.33
HOXC6-203ENST00000504315 PUM3Q15397 648 aaKnown RBP17.09■□□□□ 0.33
HOXC6-203ENST00000504315 PAXIP1Q6ZW49 1069 aaPredicted RBP17.09■□□□□ 0.33
HOXC6-203ENST00000504315 CASP8AP2Q9UKL3 1982 aa17.08■□□□□ 0.33
HOXC6-203ENST00000504315 FKBP1BP68106 108 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 MFSD14BQ5SR56 506 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.32
HOXC6-203ENST00000504315 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 COPRSQ9NQ92 184 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 TNNQ9UQP3 1299 aa17.08■□□□□ 0.32
HOXC6-203ENST00000504315 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 AOC2O75106 756 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 SCAF8Q9UPN6 1271 aaKnown RBP17.07■□□□□ 0.32
HOXC6-203ENST00000504315 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
HOXC6-203ENST00000504315 OTOFQ9HC10 1997 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 FAM155AB1AL88 458 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-203ENST00000504315 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
HOXC6-203ENST00000504315 CTCFP49711 727 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-203ENST00000504315 NOGQ13253 232 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 VPS37DQ86XT2 251 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 LPIN2Q92539 896 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
HOXC6-203ENST00000504315 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
HOXC6-203ENST00000504315 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
HOXC6-203ENST00000504315 ZBTB22O15209 634 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 SLC5A1P13866 664 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 BCAMP50895 628 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 GRM1Q13255 1194 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 PCDHAC2Q9Y5I4 1007 aa17.05■□□□□ 0.32
HOXC6-203ENST00000504315 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
HOXC6-203ENST00000504315 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
HOXC6-203ENST00000504315 TMEM57Q8N5G2 664 aa17.04■□□□□ 0.32
HOXC6-203ENST00000504315 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
HOXC6-203ENST00000504315 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
HOXC6-203ENST00000504315 SIL1Q9H173 461 aa17.04■□□□□ 0.32
HOXC6-203ENST00000504315 SLC10A3P09131 477 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 TTF2Q9UNY4 1162 aaKnown RBP17.03■□□□□ 0.32
HOXC6-203ENST00000504315 IQSEC3Q9UPP2 1182 aaPredicted RBP17.03■□□□□ 0.32
HOXC6-203ENST00000504315 PA2G4Q9UQ80 394 aaKnown RBP17.03■□□□□ 0.32
HOXC6-203ENST00000504315 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 PPP2R3BQ9Y5P8 575 aa17.03■□□□□ 0.32
HOXC6-203ENST00000504315 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 AOX1Q06278 1338 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 SRGAP3O43295 1099 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 MYO1BO43795 1136 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 GNAI2P04899 355 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
HOXC6-203ENST00000504315 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
HOXC6-203ENST00000504315 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
HOXC6-203ENST00000504315 CA12O43570 354 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 NF2P35240 595 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 ZNF157P51786 506 aaPredicted RBP17.01■□□□□ 0.31
HOXC6-203ENST00000504315 LBX1P52954 281 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 GRIK5Q16478 980 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 ATP2B3Q16720 1220 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 DEFB129Q9H1M3 183 aa17.01■□□□□ 0.31
HOXC6-203ENST00000504315 FRAT2O75474 233 aaPredicted RBP17■□□□□ 0.31
HOXC6-203ENST00000504315 CRKP46108 304 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms