RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 PA2G4Q9UQ80 394 aaKnown RBP23.29■■□□□ 1.32
RPN1-208ENST00000497415 TLL2Q9Y6L7 1015 aa23.29■■□□□ 1.32
RPN1-208ENST00000497415 ADM5C9JUS6 153 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 WNT10BO00744 389 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 IFIT1P09914 478 aaKnown RBP23.28■■□□□ 1.32
RPN1-208ENST00000497415 NBPF9Q3BBW0 867 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 CAVIN4Q5BKX8 364 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 DLK2Q6UY11 383 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 SULF1Q8IWU6 871 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 ZBED3Q96IU2 234 aaPredicted RBP23.28■■□□□ 1.32
RPN1-208ENST00000497415 SIL1Q9H173 461 aa23.28■■□□□ 1.32
RPN1-208ENST00000497415 SRGAP3O43295 1099 aa23.27■■□□□ 1.32
RPN1-208ENST00000497415 RLBP1P12271 317 aa23.27■■□□□ 1.32
RPN1-208ENST00000497415 IL15P40933 162 aaPredicted RBP23.27■■□□□ 1.32
RPN1-208ENST00000497415 VEGFBP49765 207 aa23.27■■□□□ 1.32
RPN1-208ENST00000497415 FTSJ3Q8IY81 847 aaKnown RBP23.27■■□□□ 1.32
RPN1-208ENST00000497415 LPIN2Q92539 896 aa23.27■■□□□ 1.32
RPN1-208ENST00000497415 SAPCD2Q86UD0 394 aa23.26■■□□□ 1.31
RPN1-208ENST00000497415 VPS37DQ86XT2 251 aa23.26■■□□□ 1.31
RPN1-208ENST00000497415 MTMR14Q8NCE2 650 aa23.26■■□□□ 1.31
RPN1-208ENST00000497415 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
RPN1-208ENST00000497415 JAG2Q9Y219 1238 aa23.26■■□□□ 1.31
RPN1-208ENST00000497415 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
RPN1-208ENST00000497415 SLC5A1P13866 664 aa23.25■■□□□ 1.31
RPN1-208ENST00000497415 BCAMP50895 628 aa23.25■■□□□ 1.31
RPN1-208ENST00000497415 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
RPN1-208ENST00000497415 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
RPN1-208ENST00000497415 HHIPL1Q96JK4 782 aa23.24■■□□□ 1.31
RPN1-208ENST00000497415 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
RPN1-208ENST00000497415 ATP2B3Q16720 1220 aa23.23■■□□□ 1.31
RPN1-208ENST00000497415 IQSEC3Q9UPP2 1182 aaPredicted RBP23.23■■□□□ 1.31
RPN1-208ENST00000497415 ECM29Q5VYK3 1845 aa23.22■■□□□ 1.31
RPN1-208ENST00000497415 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
RPN1-208ENST00000497415 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
RPN1-208ENST00000497415 DLGAP5Q15398 846 aa23.22■■□□□ 1.31
RPN1-208ENST00000497415 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
RPN1-208ENST00000497415 CDCA5Q96FF9 252 aa23.22■■□□□ 1.31
RPN1-208ENST00000497415 WDR33Q9C0J8 1336 aaKnown RBP23.22■■□□□ 1.31
RPN1-208ENST00000497415 GBA2Q9HCG7 927 aaPredicted RBP23.21■■□□□ 1.31
RPN1-208ENST00000497415 MYH13Q9UKX3 1938 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 ECE1P42892 770 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 CFAP100Q494V2 611 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 TBC1D22AQ8WUA7 517 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 CAPNS2Q96L46 248 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
RPN1-208ENST00000497415 ZBTB22O15209 634 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 FRAT2O75474 233 aaPredicted RBP23.19■■□□□ 1.3
RPN1-208ENST00000497415 MS4A1P11836 297 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 ATP8B2P98198 1209 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 POLA2Q14181 598 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 CYP4F22Q6NT55 531 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 C2orf69Q8N8R5 385 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 SCAF8Q9UPN6 1271 aaKnown RBP23.19■■□□□ 1.3
RPN1-208ENST00000497415 PCDHAC2Q9Y5I4 1007 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 THSD7BQ9C0I4 1608 aa23.19■■□□□ 1.3
RPN1-208ENST00000497415 SPDYE2BA6NHP3 402 aa23.18■■□□□ 1.3
RPN1-208ENST00000497415 SPDYE6P0CI01 402 aa23.18■■□□□ 1.3
RPN1-208ENST00000497415 HSPA1AP0DMV8 641 aaKnown RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 HSPA1BP0DMV9 641 aaKnown RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 CHAF1AQ13111 956 aaPredicted RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 SSH3Q8TE77 659 aa23.18■■□□□ 1.3
RPN1-208ENST00000497415 PRMT6Q96LA8 375 aaPredicted RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 SERPINA10Q9UK55 444 aa23.18■■□□□ 1.3
RPN1-208ENST00000497415 TTF2Q9UNY4 1162 aaKnown RBP23.18■■□□□ 1.3
RPN1-208ENST00000497415 PCNTO95613 3336 aa23.17■■□□□ 1.3
RPN1-208ENST00000497415 TFCP2Q12800 502 aa23.17■■□□□ 1.3
RPN1-208ENST00000497415 GRIK5Q16478 980 aa23.17■■□□□ 1.3
RPN1-208ENST00000497415 HUNKP57058 714 aa23.16■■□□□ 1.3
RPN1-208ENST00000497415 PAXIP1Q6ZW49 1069 aaPredicted RBP23.16■■□□□ 1.3
RPN1-208ENST00000497415 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
RPN1-208ENST00000497415 AKAP2Q9Y2D5 859 aa23.16■■□□□ 1.3
RPN1-208ENST00000497415 SUGT1Q9Y2Z0 365 aa23.16■■□□□ 1.3
RPN1-208ENST00000497415 TIMM10P62072 90 aa23.15■■□□□ 1.3
RPN1-208ENST00000497415 FKBP1BP68106 108 aa23.15■■□□□ 1.3
RPN1-208ENST00000497415 HDLBPQ00341 1268 aaKnown RBP23.15■■□□□ 1.3
RPN1-208ENST00000497415 G3BP1Q13283 466 aaKnown RBP eCLIP23.15■■□□□ 1.31e-11■■■■■ 36.6
RPN1-208ENST00000497415 WDR66Q8TBY9 1149 aa23.15■■□□□ 1.3
RPN1-208ENST00000497415 MRIQ9BWK5 157 aa23.15■■□□□ 1.3
RPN1-208ENST00000497415 GNL3LQ9NVN8 582 aaKnown RBP23.15■■□□□ 1.3
RPN1-208ENST00000497415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.15■■□□□ 1.3
RPN1-208ENST00000497415 COL1A1P02452 1464 aaPredicted RBP23.15■■□□□ 1.3
RPN1-208ENST00000497415 PAPPA2Q9BXP8 1791 aa23.14■■□□□ 1.3
RPN1-208ENST00000497415 MYO1BO43795 1136 aa23.14■■□□□ 1.29
RPN1-208ENST00000497415 ADORA1P30542 326 aa23.14■■□□□ 1.29
RPN1-208ENST00000497415 PHKA1P46020 1223 aa23.14■■□□□ 1.29
RPN1-208ENST00000497415 RBM5P52756 815 aaKnown RBP eCLIP23.14■■□□□ 1.29
RPN1-208ENST00000497415 PRAMEF18Q5VWM3 479 aa23.14■■□□□ 1.29
RPN1-208ENST00000497415 AOX1Q06278 1338 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 A0A1B0GUL7 405 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 SEMA3EO15041 775 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 MAP2K2P36507 400 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 CRKP46108 304 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 CCDC102BQ68D86 513 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 WBP1LQ9NX94 342 aa23.13■■□□□ 1.29
RPN1-208ENST00000497415 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
RPN1-208ENST00000497415 RGMBQ6NW40 437 aa23.12■■□□□ 1.29
RPN1-208ENST00000497415 DEFB129Q9H1M3 183 aa23.12■■□□□ 1.29
RPN1-208ENST00000497415 DENND2AQ9ULE3 1009 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms