RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 USP48Q86UV5 1035 aa27.52■■■□□ 2
PCOLCE-210ENST00000496269 FTSJ3Q8IY81 847 aaKnown RBP27.52■■■□□ 2
PCOLCE-210ENST00000496269 JAG2Q9Y219 1238 aa27.52■■■□□ 2
PCOLCE-210ENST00000496269 RASSF10A6NK89 507 aa27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 ADM5C9JUS6 153 aa27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 IL15P40933 162 aaPredicted RBP27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 MKRN1Q9UHC7 482 aaKnown RBP27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 PCNTO95613 3336 aa27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 COL1A1P02452 1464 aaPredicted RBP27.51■■□□□ 1.99
PCOLCE-210ENST00000496269 PITPNM2Q9BZ72 1349 aa27.5■■□□□ 1.99
PCOLCE-210ENST00000496269 NBPF9Q3BBW0 867 aa27.5■■□□□ 1.99
PCOLCE-210ENST00000496269 KRT26Q7Z3Y9 468 aa27.5■■□□□ 1.99
PCOLCE-210ENST00000496269 PANK1Q8TE04 598 aa27.5■■□□□ 1.99
PCOLCE-210ENST00000496269 LPIN2Q92539 896 aa27.5■■□□□ 1.99
PCOLCE-210ENST00000496269 WNT10BO00744 389 aa27.49■■□□□ 1.99
PCOLCE-210ENST00000496269 BCAMP50895 628 aa27.49■■□□□ 1.99
PCOLCE-210ENST00000496269 ANGEL2Q5VTE6 544 aaKnown RBP27.49■■□□□ 1.99
PCOLCE-210ENST00000496269 ITPRIPQ8IWB1 547 aa27.49■■□□□ 1.99
PCOLCE-210ENST00000496269 RCAN3Q9UKA8 241 aa27.49■■□□□ 1.99
PCOLCE-210ENST00000496269 OGFOD1Q8N543 542 aa27.48■■□□□ 1.99
PCOLCE-210ENST00000496269 DCPSQ96C86 337 aaKnown RBP27.48■■□□□ 1.99
PCOLCE-210ENST00000496269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.48■■□□□ 1.99
PCOLCE-210ENST00000496269 CELF2O95319 508 aaKnown RBP27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 IFIT1P09914 478 aaKnown RBP27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 POLA2Q14181 598 aa27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 MTMR14Q8NCE2 650 aa27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 CEP126Q9P2H0 1117 aa27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 TLL2Q9Y6L7 1015 aa27.47■■□□□ 1.99
PCOLCE-210ENST00000496269 SLC5A1P13866 664 aa27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 ATP2B3Q16720 1220 aa27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 CAVIN4Q5BKX8 364 aa27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 C1orf115Q9H7X2 142 aa27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 PCDHAC2Q9Y5I4 1007 aa27.46■■□□□ 1.99
PCOLCE-210ENST00000496269 GRIK5Q16478 980 aa27.45■■□□□ 1.98
PCOLCE-210ENST00000496269 MFSD14BQ5SR56 506 aa27.45■■□□□ 1.98
PCOLCE-210ENST00000496269 SSH3Q8TE77 659 aa27.45■■□□□ 1.98
PCOLCE-210ENST00000496269 HDAC9Q9UKV0 1011 aa27.45■■□□□ 1.98
PCOLCE-210ENST00000496269 VEGFBP49765 207 aa27.44■■□□□ 1.98
PCOLCE-210ENST00000496269 AOX1Q06278 1338 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 ZBTB22O15209 634 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 ATP8B2P98198 1209 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 SAPCD2Q86UD0 394 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 VPS37DQ86XT2 251 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 SULF1Q8IWU6 871 aa27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 ABT1Q9ULW3 272 aaKnown RBP27.43■■□□□ 1.98
PCOLCE-210ENST00000496269 F8W031 263 aaPredicted RBP27.42■■□□□ 1.98
PCOLCE-210ENST00000496269 TFCP2Q12800 502 aa27.42■■□□□ 1.98
PCOLCE-210ENST00000496269 DEFB115Q30KQ5 88 aa27.42■■□□□ 1.98
PCOLCE-210ENST00000496269 CDCA5Q96FF9 252 aa27.42■■□□□ 1.98
PCOLCE-210ENST00000496269 SCAF8Q9UPN6 1271 aaKnown RBP27.42■■□□□ 1.98
PCOLCE-210ENST00000496269 ADORA1P30542 326 aa27.41■■□□□ 1.98
PCOLCE-210ENST00000496269 ZNF408Q9H9D4 720 aa27.41■■□□□ 1.98
PCOLCE-210ENST00000496269 PAPPA2Q9BXP8 1791 aa27.4■■□□□ 1.98
PCOLCE-210ENST00000496269 CFAP100Q494V2 611 aa27.4■■□□□ 1.98
PCOLCE-210ENST00000496269 SPDYE2BA6NHP3 402 aa27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 SPDYE6P0CI01 402 aa27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 CHAF1AQ13111 956 aaPredicted RBP27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 MVPQ14764 893 aaKnown RBP27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 DLGAP5Q15398 846 aa27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 HHIPL1Q96JK4 782 aa27.39■■□□□ 1.98
PCOLCE-210ENST00000496269 MS4A1P11836 297 aa27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 PHKA1P46020 1223 aa27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 CEP85Q6P2H3 762 aa27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 TBC1D22AQ8WUA7 517 aa27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 PRMT6Q96LA8 375 aaPredicted RBP27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 TTF2Q9UNY4 1162 aaKnown RBP27.38■■□□□ 1.97
PCOLCE-210ENST00000496269 TIMM10P62072 90 aa27.37■■□□□ 1.97
PCOLCE-210ENST00000496269 SERPINA10Q9UK55 444 aa27.37■■□□□ 1.97
PCOLCE-210ENST00000496269 A0A1B0GUL7 405 aa27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 C20orf194Q5TEA3 1177 aa27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 GBA2Q9HCG7 927 aaPredicted RBP27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 COG6Q9Y2V7 657 aa27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 NOP58Q9Y2X3 529 aaKnown RBP27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 WDR33Q9C0J8 1336 aaKnown RBP27.36■■□□□ 1.97
PCOLCE-210ENST00000496269 CCDC102BQ68D86 513 aa27.35■■□□□ 1.97
PCOLCE-210ENST00000496269 CYP4F22Q6NT55 531 aa27.35■■□□□ 1.97
PCOLCE-210ENST00000496269 CAPNS2Q96L46 248 aa27.35■■□□□ 1.97
PCOLCE-210ENST00000496269 FRAT2O75474 233 aaPredicted RBP27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 PRAMEF18Q5VWM3 479 aa27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 APOBEC3FQ8IUX4 373 aaKnown RBP27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 XAGE2Q96GT9 111 aa27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 ZBTB40Q9NUA8 1239 aa27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 AKAP2Q9Y2D5 859 aa27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 SSC5DA1L4H1 1573 aa27.34■■□□□ 1.97
PCOLCE-210ENST00000496269 CRKP46108 304 aa27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 HDLBPQ00341 1268 aaKnown RBP27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 G3BP1Q13283 466 aaKnown RBP eCLIP27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 DDX19BQ9UMR2 479 aa27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 SUGT1Q9Y2Z0 365 aa27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 SALL1Q9NSC2 1324 aa27.33■■□□□ 1.97
PCOLCE-210ENST00000496269 SEMA3EO15041 775 aa27.32■■□□□ 1.96
PCOLCE-210ENST00000496269 PDE3AQ14432 1141 aa27.32■■□□□ 1.96
PCOLCE-210ENST00000496269 WDR66Q8TBY9 1149 aa27.32■■□□□ 1.96
PCOLCE-210ENST00000496269 CLRN2A0PK11 232 aa27.31■■□□□ 1.96
PCOLCE-210ENST00000496269 HSPA1AP0DMV8 641 aaKnown RBP27.31■■□□□ 1.96
PCOLCE-210ENST00000496269 HSPA1BP0DMV9 641 aaKnown RBP27.31■■□□□ 1.96
PCOLCE-210ENST00000496269 HUNKP57058 714 aa27.31■■□□□ 1.96
PCOLCE-210ENST00000496269 RASGRF1Q13972 1273 aa27.31■■□□□ 1.96
PCOLCE-210ENST00000496269 SPDYE2Q495Y8 402 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms